; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G094880 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G094880
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionLYR motif-containing protein 2
Genome locationCiama_Chr05:25311458..25317522
RNA-Seq ExpressionCaUC05G094880
SyntenyCaUC05G094880
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591251.1 LYR motif-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3090.24Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEMENNRSC+DRQK+RFL+SEG+ERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS

XP_022936861.1 uncharacterized protein LOC111443321 [Cucurbita moschata]3.5e-3090.24Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEMENNR C+DRQK+RFL+SEGIERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS

XP_022975831.1 uncharacterized protein LOC111476418 [Cucurbita maxima]5.9e-3091.46Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEMENNRSC+DRQKIRFL+SEG ERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS

XP_023535371.1 uncharacterized protein LOC111796833 [Cucurbita pepo subsp. pepo]1.2e-3091.46Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEMENNRSC+DRQK+RFL+SEGIERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS

XP_038877724.1 uncharacterized protein LOC120069952 [Benincasa hispida]3.1e-3190.48Show/hide
Query:  LAMVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS
        +AM LSLDLQ+FILRARVLKLYRQALRTARKAPVHAREEL++TMRQEMENNR+CN+RQKIR+LVSEGIERLKRLDEMLDMQGHS
Subjt:  LAMVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS

TrEMBL top hitse value%identityAlignment
A0A6J1CHJ1 uncharacterized protein LOC1110112188.3e-3087.8Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS
        MV+SLDL EFILRARVLKL+RQALRTARKAPVHAREELR+T+RQEMENNRSCND+QK+R+L+SEGIE LKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS

A0A6J1F8N3 uncharacterized protein LOC1114433211.7e-3090.24Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEMENNR C+DRQK+RFL+SEGIERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS

A0A6J1FM54 uncharacterized protein LOC1114464661.2e-2887.65Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGH
        MVLSLDLQEFILRARVLKLYR ALRTA+KAPVHAREELR+T+RQEMENNR CN+RQK+RFL+SEGIERLKRL+EMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGH

A0A6J1IFA5 uncharacterized protein LOC1114764182.9e-3091.46Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEMENNRSC+DRQKIRFL+SEG ERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGHS

A0A6J1IY12 uncharacterized protein LOC1114809621.7e-2786.42Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGH
        MVLSLDLQEFILRARVLKLYRQALR A+KAPVHAREELR  +RQEMENNR CN+RQK+RFL+SEGIERLKRL+EMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76065.1 LYR family of Fe/S cluster biogenesis protein6.5e-2773.75Show/hide
Query:  VLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGH
        ++ LDLQ FILRARVLKLYRQAL+ A +APVH R EL+ T+RQEME NR CND+QKIR+L+SEG+ER+K LDEMLDMQGH
Subjt:  VLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKRLDEMLDMQGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCTCCCTTGATTTGCAGGAATTTATTCTCCGAGCAAGAGTGTTGAAACTGTATAGGCAGGCTTTAAGAACTGCTCGCAAAGCTCCTGTTCACGCTCGAGAGGA
ACTGAGGAATACGATGAGACAAGAAATGGAGAACAACCGCAGCTGCAACGACAGACAGAAAATAAGATTTTTGCCCAAGCTGGTCGTGCCAGACATTAGTAGAAGGTGTT
GGTCAGAGCTACTCTCCTTTCTCTCACAGCCACCAGGCACAGCAGAAGGCTTCTCCAGAACAACGCCGTCTTCCGTCGTCGCCTCGACTTCTGAACTCGGAACTGAACCA
CAGAAATGGTTACACGCTCGATTGAATCAGACCTGGAATTCTCTTCAGTTTAATCTGCAGCAGTCGACTCCACCAACTGTGTTACCCTCTTCCTTTTGTTCTCTAAGAGC
GCTCGCCATGGTTCTCTCCCTTGATTTGCAGGAATTTATTCTCCGAGCAAGAGTGTTGAAACTGTATAGGCAGGCTTTAAGAACTGCTCGCAAAGCTCCTGTTCACGCTC
GAGAGGAACTGAGGAATACGATGAGACAAGAAATGGAGAACAACCGCAGCTGCAACGACAGACAGAAAATAAGATTTTTGGTGAGTGAAGGAATAGAGAGATTGAAGCGT
TTAGATGAGATGTTGGATATGCAGGGTCATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTCTCCCTTGATTTGCAGGAATTTATTCTCCGAGCAAGAGTGTTGAAACTGTATAGGCAGGCTTTAAGAACTGCTCGCAAAGCTCCTGTTCACGCTCGAGAGGA
ACTGAGGAATACGATGAGACAAGAAATGGAGAACAACCGCAGCTGCAACGACAGACAGAAAATAAGATTTTTGCCCAAGCTGGTCGTGCCAGACATTAGTAGAAGGTGTT
GGTCAGAGCTACTCTCCTTTCTCTCACAGCCACCAGGCACAGCAGAAGGCTTCTCCAGAACAACGCCGTCTTCCGTCGTCGCCTCGACTTCTGAACTCGGAACTGAACCA
CAGAAATGGTTACACGCTCGATTGAATCAGACCTGGAATTCTCTTCAGTTTAATCTGCAGCAGTCGACTCCACCAACTGTGTTACCCTCTTCCTTTTGTTCTCTAAGAGC
GCTCGCCATGGTTCTCTCCCTTGATTTGCAGGAATTTATTCTCCGAGCAAGAGTGTTGAAACTGTATAGGCAGGCTTTAAGAACTGCTCGCAAAGCTCCTGTTCACGCTC
GAGAGGAACTGAGGAATACGATGAGACAAGAAATGGAGAACAACCGCAGCTGCAACGACAGACAGAAAATAAGATTTTTGGTGAGTGAAGGAATAGAGAGATTGAAGCGT
TTAGATGAGATGTTGGATATGCAGGGTCATTCATAA
Protein sequenceShow/hide protein sequence
MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLPKLVVPDISRRCWSELLSFLSQPPGTAEGFSRTTPSSVVASTSELGTEP
QKWLHARLNQTWNSLQFNLQQSTPPTVLPSSFCSLRALAMVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMENNRSCNDRQKIRFLVSEGIERLKR
LDEMLDMQGHS