CuGenDBv2

Gene ID	CaUC05G095500
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Protein FAM33A
Genome location	Ciama_Chr05:26539422..26541641
RNA-Seq Expression	CaUC05G095500
Synteny	CaUC05G095500
Gene Ontology terms	GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000940 - condensed chromosome outer kinetochore (cellular component) GO:0005876 - spindle microtubule (cellular component) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR026762 - Spindle and kinetochore-associated protein 2 IPR042091 - Ska2, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591515.1 hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia]

6.0e-29

67.24

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                            ANPMKL  RIKKIRDDISTLKEQCREV
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV

Query:  LMAKQGKTAKRTRTVM
        LMAKQ     + RTV+
Subjt:  LMAKQGKTAKRTRTVM

KAG7024402.1 hypothetical protein SDJN02_13216, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.2e-31

72.41

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS       L++L+ G   +E  V  L   ANPMKL  RIKKIRDDISTLKEQCREV
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV

Query:  LMAKQGKTAKRTRTVM
        LMAKQ     + RTV+
Subjt:  LMAKQGKTAKRTRTVM

XP_022935897.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata]

6.0e-29

67.24

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                            ANPMKL  RIKKIRDDISTLKEQCREV
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV

Query:  LMAKQGKTAKRTRTVM
        LMAKQ     + RTV+
Subjt:  LMAKQGKTAKRTRTVM

XP_022935898.1 spindle and kinetochore-associated protein 2 isoform X2 [Cucurbita moschata]

6.0e-29

67.24

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                            ANPMKL  RIKKIRDDISTLKEQCREV
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV

Query:  LMAKQGKTAKRTRTVM
        LMAKQ     + RTV+
Subjt:  LMAKQGKTAKRTRTVM

XP_038898183.1 spindle and kinetochore-associated protein 2 [Benincasa hispida]

1.3e-28

67.24

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV
        M LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYP+S                            ANPMKLVSRIKKIRDDISTLKEQCREV
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV

Query:  LMAKQGKTAKRTRTVM
        LMAKQ     + RTV+
Subjt:  LMAKQGKTAKRTRTVM

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CJF1 Protein FAM33A

1.9e-28

65.52

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV
        MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDS                            ANPMKLVSRIKKIRDDISTL+EQCRE+
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV

Query:  LMAKQGKTAKRTRTVM
        LMAKQ     + RTV+
Subjt:  LMAKQGKTAKRTRTVM

A0A6J1F6V9 Protein FAM33A

2.9e-29

67.24

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                            ANPMKL  RIKKIRDDISTLKEQCREV
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV

Query:  LMAKQGKTAKRTRTVM
        LMAKQ     + RTV+
Subjt:  LMAKQGKTAKRTRTVM

A0A6J1FBS9 Protein FAM33A

2.9e-29

67.24

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                            ANPMKL  RIKKIRDDISTLKEQCREV
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV

Query:  LMAKQGKTAKRTRTVM
        LMAKQ     + RTV+
Subjt:  LMAKQGKTAKRTRTVM

A0A6J1IP41 Protein FAM33A

3.6e-27

64.66

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV
        M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                            ANPMKL  RIKKIRDDISTLKEQCR+V
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV

Query:  LMAKQGKTAKRTRTVM
        LMAKQ     + RTV+
Subjt:  LMAKQGKTAKRTRTVM

A0A6J1IQK7 Protein FAM33A

3.6e-27

64.66

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV
        M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                            ANPMKL  RIKKIRDDISTLKEQCR+V
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREV

Query:  LMAKQGKTAKRTRTVM
        LMAKQ     + RTV+
Subjt:  LMAKQGKTAKRTRTVM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G24970.1 unknown protein

4.8e-16

40.35

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Query:  LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLM
        + H H HHQA D L N+F++A+HDL+VV  +L+KEFQQ+YP                             NANPMKL+ RIKK+++D++ LK QC ++L 
Subjt:  LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLM

Query:  AKQGKTAKRTRTVM
        AKQ    K   T++
Subjt:  AKQGKTAKRTRTVM

Sequences

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CDS sequence

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ATGGGGCTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAG
AAGGAGTTTCAGCAAATTTATCCCGATAGCCGTGAGAGCATCATTGGCTTTCTCTATCTTCTTAATCGAGGCACTGTTTGGTTTGAGGATGGAGTTGGAGATCTG
GAGCTCAATGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAAATACGAGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAG
GGGAAGACGGCCAAGAGGACGCGGACTGTGATGACGTCAACAAGTTGCTATTCTCGGCGGTAG

mRNA sequence

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Protein sequence

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MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSRESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQ
GKTAKRTRTVMTSTSCYSRR

CaUC05G095500 (gene) of Watermelon (USVL246-FR2) v1 genome