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CaUC05G096540 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G096540
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionHistone deacetylase-like protein
Genome locationCiama_Chr05:27750562..27755348
RNA-Seq ExpressionCaUC05G096540
SyntenyCaUC05G096540
Gene Ontology termsGO:0050896 - response to stimulus (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038795.1 uncharacterized protein E6C27_scaffold92G003500 [Cucumis melo var. makuwa]1.7e-5179.72Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVD-YSRRRV-KISRWSD-TRKC
        MAL INCSSSSVFLLPQ P  NSFDSTKTA+L +KED GSWRSRSVCALGLASLIFAIE+GDVF+ASESLALES PQLVD YSRRR+ KI RWSD  RKC
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVD-YSRRRV-KISRWSD-TRKC

Query:  APWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDV-KNAPGIQ
        APWRA S EIIVPENLPRPS RR  EA+A+ F+D+ KNAPG+Q
Subjt:  APWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDV-KNAPGIQ

XP_004136339.1 uncharacterized protein LOC101204764 [Cucumis sativus]4.4e-4772.55Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRS-RSVCALGLASLIFAIELGDVFVASESLALESPPQ-LVDY---SRRRVKISRWSD-T
        MALRINCSSSS+ LLPQAP SNSF STK+++LS+KEDE SWRS RSVCALGLASLIFAIE+ DVF+ASESLA+ESPPQ LVDY    RR  KISRWSD  
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRS-RSVCALGLASLIFAIELGDVFVASESLALESPPQ-LVDY---SRRRVKISRWSD-T

Query:  RKCAPWRANSFEIIVPENLPRPSHRRNWEAVAFT-FMDVKN--APGIQAKLNK
        RKCAPWRANS EIIVPENLPR S RR WE +A+  F+DVK    PGIQ   ++
Subjt:  RKCAPWRANSFEIIVPENLPRPSHRRNWEAVAFT-FMDVKN--APGIQAKLNK

XP_022981718.1 uncharacterized protein LOC111480783 [Cucurbita maxima]2.8e-4668.18Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPW
        M L INC SSSV LLP+APDSNSFDS+K A+LS K+D G+WR RS CALGLASLI AIE GD+ VA E+ ALESPPQ+VD   RRVKISRWSD RKCA W
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPW

Query:  RANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNKRKDLVELRCN
        RANS EIIVPENLPRPS RR WE +AFT  DV+NAP +Q  L+   D++ + C+
Subjt:  RANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNKRKDLVELRCN

XP_023524416.1 uncharacterized protein LOC111788320 [Cucurbita pepo subsp. pepo]7.5e-4772.92Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPW
        M L INC SSSV LLP+APDSNSFDS+K A+LS K+D+G+WR RS CALGLASLI AIE GDV VA E+ ALESPPQ+VD   RRVKISRWSD RKCA W
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPW

Query:  RANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNK
        RANS EIIVPENLPRPS RR WEA+AFT  DV+NAP +Q   +K
Subjt:  RANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNK

XP_038899075.1 uncharacterized protein LOC120086473 [Benincasa hispida]1.5e-6386.11Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPW
        MALRI+CSSSSVFLLPQAPDSNSFDSTKTA+LSVKEDEGSWRSRSVC LGLASLIFAIE+ D+FVASESLALESPPQLVDYSR+RVKISRWSD RKCAPW
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPW

Query:  RANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNK
        RANS E IVPENLPRPSHRR WEA+A+  MDVKNAPGI+   +K
Subjt:  RANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNK

TrEMBL top hitse value%identityAlignment
A0A0A0LDQ8 Uncharacterized protein2.1e-4772.55Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRS-RSVCALGLASLIFAIELGDVFVASESLALESPPQ-LVDY---SRRRVKISRWSD-T
        MALRINCSSSS+ LLPQAP SNSF STK+++LS+KEDE SWRS RSVCALGLASLIFAIE+ DVF+ASESLA+ESPPQ LVDY    RR  KISRWSD  
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRS-RSVCALGLASLIFAIELGDVFVASESLALESPPQ-LVDY---SRRRVKISRWSD-T

Query:  RKCAPWRANSFEIIVPENLPRPSHRRNWEAVAFT-FMDVKN--APGIQAKLNK
        RKCAPWRANS EIIVPENLPR S RR WE +A+  F+DVK    PGIQ   ++
Subjt:  RKCAPWRANSFEIIVPENLPRPSHRRNWEAVAFT-FMDVKN--APGIQAKLNK

A0A5A7TBN7 Uncharacterized protein8.3e-5279.72Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVD-YSRRRV-KISRWSD-TRKC
        MAL INCSSSSVFLLPQ P  NSFDSTKTA+L +KED GSWRSRSVCALGLASLIFAIE+GDVF+ASESLALES PQLVD YSRRR+ KI RWSD  RKC
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVD-YSRRRV-KISRWSD-TRKC

Query:  APWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDV-KNAPGIQ
        APWRA S EIIVPENLPRPS RR  EA+A+ F+D+ KNAPG+Q
Subjt:  APWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDV-KNAPGIQ

A0A6J1CAG3 uncharacterized protein LOC111009442 isoform X11.3e-4473.05Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALES--PPQLVDYSRRRVKISRWSDTRKCA
        MALR+NC S+SVFLLP+APDSNSFD++K A+LS+KE EGSWRSR  CALGLASLI AIE G+ FVA E  ALES  PPQLVD   RR+KISRWSD RKCA
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALES--PPQLVDYSRRRVKISRWSDTRKCA

Query:  PWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQ
        PWRANS E IVPENLPRPS RR WE V FT     NAP IQ
Subjt:  PWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQ

A0A6J1CAH3 uncharacterized protein LOC111009442 isoform X29.9e-4572.03Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALES--PPQLVDYSRRRVKISRWSDTRKCA
        MALR+NC S+SVFLLP+APDSNSFD++K A+LS+KE EGSWRSR  CALGLASLI AIE G+ FVA E  ALES  PPQLVD   RR+KISRWSD RKCA
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALES--PPQLVDYSRRRVKISRWSDTRKCA

Query:  PWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAK
        PWRANS E IVPENLPRPS RR WE V FT     NAP IQ +
Subjt:  PWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAK

A0A6J1J2V8 uncharacterized protein LOC1114807831.4e-4668.18Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPW
        M L INC SSSV LLP+APDSNSFDS+K A+LS K+D G+WR RS CALGLASLI AIE GD+ VA E+ ALESPPQ+VD   RRVKISRWSD RKCA W
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPW

Query:  RANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNKRKDLVELRCN
        RANS EIIVPENLPRPS RR WE +AFT  DV+NAP +Q  L+   D++ + C+
Subjt:  RANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNKRKDLVELRCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25625.1 unknown protein3.5e-1034.42Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDS-----TKTAQLSVKEDEGSWRSR-SVCA--LGLAS--LIFAIELGDVFVASESLALESPPQLVDYSRRRVKISR
        MA RI+C  +    LP   DSNS  S       T+++S +  E     R + C+  LG+A+  +I  I++ DV  + E+  ++SP +  + +   V   R
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDS-----TKTAQLSVKEDEGSWRSR-SVCA--LGLAS--LIFAIELGDVFVASESLALESPPQLVDYSRRRVKISR

Query:  WSDTRKCAPWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNK
        WSD R C PW  NS E IVPENLPRPS  R  E       D      +  ++N+
Subjt:  WSDTRKCAPWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNK

AT2G25625.2 unknown protein3.5e-1033.33Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDS-----TKTAQLSVKEDEGSWRSRSVCA--LGLAS--LIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRW
        MA RI+C  +    LP   DSNS  S       T+++S + +  +   ++ C+  LG+A+  +I  I++ DV  + E+  ++SP +  + +   V   RW
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDS-----TKTAQLSVKEDEGSWRSRSVCA--LGLAS--LIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRW

Query:  SDTRKCAPWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNK
        SD R C PW  NS E IVPENLPRPS  R  E       D      +  ++N+
Subjt:  SDTRKCAPWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTAAGAATCAACTGTTCATCTTCTTCAGTTTTTCTCCTTCCTCAAGCTCCCGATTCAAATTCCTTCGATTCTACAAAAACCGCTCAATTATCTGTGAAGGAAGA
TGAAGGATCATGGAGAAGCCGAAGCGTATGCGCTTTAGGTTTAGCGAGCTTGATTTTCGCAATCGAACTCGGCGATGTCTTCGTGGCTAGTGAATCTCTGGCTCTGGAAT
CGCCGCCGCAACTTGTGGATTATTCGAGGAGGCGTGTGAAGATCTCGAGATGGAGCGATACAAGAAAATGCGCTCCATGGCGAGCCAATTCATTCGAGATCATCGTACCT
GAGAACCTTCCCAGGCCGTCGCATCGCCGGAATTGGGAGGCAGTTGCATTTACATTCATGGATGTGAAGAACGCTCCGGGAATTCAAGCAAAATTGAACAAAAGAAAAGA
TCTAGTTGAATTGAGATGTAATGCAGTAGTACAGATTGGCATTATTCAGCAAGCTTTGAAAGCAACCAACTTCTTTTCTGCATCATCAAACAAATATAAGCCAAGCCCAT
CCCTTAAGCAAGCACTTGTATTTGCTATAAAGAAAATAATGACAAATGCTGATGAAACTGGACTTAACAACAACACTTTCTACCATAAATTCTCTTTACCCTTCAGTGTT
GGCCAACGACCTCTTGCTGCGAACAAAAGGCACAAGAACGGCAAGGGCGGGATGGGGACGGAAAGAAAGCCATCATCGTTGTTGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTAAGAATCAACTGTTCATCTTCTTCAGTTTTTCTCCTTCCTCAAGCTCCCGATTCAAATTCCTTCGATTCTACAAAAACCGCTCAATTATCTGTGAAGGAAGA
TGAAGGATCATGGAGAAGCCGAAGCGTATGCGCTTTAGGTTTAGCGAGCTTGATTTTCGCAATCGAACTCGGCGATGTCTTCGTGGCTAGTGAATCTCTGGCTCTGGAAT
CGCCGCCGCAACTTGTGGATTATTCGAGGAGGCGTGTGAAGATCTCGAGATGGAGCGATACAAGAAAATGCGCTCCATGGCGAGCCAATTCATTCGAGATCATCGTACCT
GAGAACCTTCCCAGGCCGTCGCATCGCCGGAATTGGGAGGCAGTTGCATTTACATTCATGGATGTGAAGAACGCTCCGGGAATTCAAGCAAAATTGAACAAAAGAAAAGA
TCTAGTTGAATTGAGATGTAATGCAGTAGTACAGATTGGCATTATTCAGCAAGCTTTGAAAGCAACCAACTTCTTTTCTGCATCATCAAACAAATATAAGCCAAGCCCAT
CCCTTAAGCAAGCACTTGTATTTGCTATAAAGAAAATAATGACAAATGCTGATGAAACTGGACTTAACAACAACACTTTCTACCATAAATTCTCTTTACCCTTCAGTGTT
GGCCAACGACCTCTTGCTGCGAACAAAAGGCACAAGAACGGCAAGGGCGGGATGGGGACGGAAAGAAAGCCATCATCGTTGTTGCCTTAA
Protein sequenceShow/hide protein sequence
MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPWRANSFEIIVP
ENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNKRKDLVELRCNAVVQIGIIQQALKATNFFSASSNKYKPSPSLKQALVFAIKKIMTNADETGLNNNTFYHKFSLPFSV
GQRPLAANKRHKNGKGGMGTERKPSSLLP