; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G096840 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G096840
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionreplication protein A 32 kDa subunit A-like
Genome locationCiama_Chr05:28165518..28170747
RNA-Seq ExpressionCaUC05G096840
SyntenyCaUC05G096840
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]7.5e-9475.72Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT
        MFSS+QFDS SGFTSSQ+ +SS+ K                    +RE+PGLVP TVKQISEASHSGEEKANF INGVDITNVT+VGKVSEKAERNTDIT
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT

Query:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT
        F +DDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHLKIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDS +KT
Subjt:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT

Query:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV
        P               PSEQHTVDVKKNCD+L+LDYLQLPSSV
Subjt:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV

XP_004136317.1 replication protein A 32 kDa subunit A [Cucumis sativus]4.2e-9779.01Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT
        MFSSTQFDSASGFTSSQ+N+SS+ K                    SRESPGL+PVTVKQISEASHSGEEKANFVINGVDITNVT+VGKVSEKAERNTDIT
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT

Query:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT
        FT+DDGTGTIGCKRWVNDTFDT QMEEIQDGMYVRVNGHLK+FQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNL G GSTQ Q+SDS +KT
Subjt:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT

Query:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV
        P               PSEQHTVDVKK+CDELVLDYLQLPSSV
Subjt:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV

XP_008466326.1 PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis melo]1.6e-9678.6Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT
        MFSSTQFDS SGFTSSQ+N+SS+ K                    SRESPGLVPVTVKQISEASHSGEEKANFVIN VDITNVT+VGKVSEKAERNTDIT
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT

Query:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT
        FT+DDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLK+FQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNL G+GSTQ Q+SDS +KT
Subjt:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT

Query:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV
        P               PSEQHTVDVKK+CDELVLDYLQLPSSV
Subjt:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV

XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]3.0e-9576.54Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT
        MFSS+QFDS SGFTSSQ+N+SS+ K                    +RE+PGLVP TVKQISEASHSGEEKANFVINGVDITNVT+VGKVSEKAERNTDIT
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT

Query:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT
        F +DDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHLKIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDS +KT
Subjt:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT

Query:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV
        P               PSEQHTVDVKKNCD+L+LDYLQLPSSV
Subjt:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV

XP_038897330.1 replication protein A 32 kDa subunit A-like [Benincasa hispida]7.7e-9980.25Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT
        MFS TQFDSASGFTSSQ+N+SS+ K                    SRESPGLVPVTVKQISEASHSGEEKANFV+NGVDITNV +VGKVSEKAERNTDIT
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT

Query:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT
        FT+DDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNG+G TQFQSSDS +KT
Subjt:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT

Query:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV
        P               PSEQHTVDVKKNCDELVLDYLQLPSSV
Subjt:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV

TrEMBL top hitse value%identityAlignment
A0A0A0LEG7 Uncharacterized protein2.1e-9779.01Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT
        MFSSTQFDSASGFTSSQ+N+SS+ K                    SRESPGL+PVTVKQISEASHSGEEKANFVINGVDITNVT+VGKVSEKAERNTDIT
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT

Query:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT
        FT+DDGTGTIGCKRWVNDTFDT QMEEIQDGMYVRVNGHLK+FQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNL G GSTQ Q+SDS +KT
Subjt:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT

Query:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV
        P               PSEQHTVDVKK+CDELVLDYLQLPSSV
Subjt:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV

A0A1S3CR64 replication protein A 32 kDa subunit A-like7.8e-9778.6Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT
        MFSSTQFDS SGFTSSQ+N+SS+ K                    SRESPGLVPVTVKQISEASHSGEEKANFVIN VDITNVT+VGKVSEKAERNTDIT
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT

Query:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT
        FT+DDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLK+FQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNL G+GSTQ Q+SDS +KT
Subjt:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT

Query:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV
        P               PSEQHTVDVKK+CDELVLDYLQLPSSV
Subjt:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV

A0A6J1CUB8 replication protein A 32 kDa subunit A4.4e-8473.25Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT
        MFSS+QFDS SGFTSSQ  +S++ K                    SRESPGLVPVTVKQISEA HSGEEKANFVINGVDITNVT+VGKVSEKAERNTDIT
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT

Query:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTL--
        F +DDGTG IGCKRWVNDTFDTKQM++IQDGMY+RVNGHLKIFQ N QIFAFSVRPVTN DEITFHFIECIHD+LRNSKLQ LNG  STQ QSSDST+  
Subjt:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTL--

Query:  ---------KTPPSE----QHTVDVKKNCDELVLDYLQLPSSV
                 +T  SE    QHTVDVKKN D+LVLDYLQLPSSV
Subjt:  ---------KTPPSE----QHTVDVKKNCDELVLDYLQLPSSV

A0A6J1F8S8 replication protein A 32 kDa subunit A-like1.5e-9576.54Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT
        MFSS+QFDS SGFTSSQ+N+SS+ K                    +RE+PGLVP TVKQISEASHSGEEKANFVINGVDITNVT+VGKVSEKAERNTDIT
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT

Query:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT
        F +DDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHLKIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDS +KT
Subjt:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT

Query:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV
        P               PSEQHTVDVKKNCD+L+LDYLQLPSSV
Subjt:  P---------------PSEQHTVDVKKNCDELVLDYLQLPSSV

A0A6J1IMU1 replication protein A 32 kDa subunit A-like3.6e-9475.1Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT
        MFSS+QFDS SGFT SQ+N+SS+ K                    +RE+PGLVP TVKQISEASHSGEEKANF INGVDITNVT+VGKVSEKAERNTDIT
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDIT

Query:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT
        F +DDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHLKIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDS +KT
Subjt:  FTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT

Query:  P-----------------PSEQHTVDVKKNCDELVLDYLQLPSSV
        P                 PSEQHTVDVKKNCD+L+LDYLQLPSSV
Subjt:  P-----------------PSEQHTVDVKKNCDELVLDYLQLPSSV

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C2.5e-2336.7Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEA-----SHSGEEKANFVINGVDITNVTVVGKVSEKAER
        M ++  + S +    SQ + +   +++    GT        S        G VP TV  IS +     +  G     F I+GV+ TNV V+G+V     R
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEA-----SHSGEEKANFVINGVDITNVTVVGKVSEKAER

Query:  NTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQ
        +TD+ FT+DD TG I   RW+ D  DT+    IQ+G+YV+V  +L  FQ+ KQ  A S+RP+ NF+E+  HFIEC+H HL +  SK+Q
Subjt:  NTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQ

Q6H7J5 Replication protein A 32 kDa subunit B3.7e-3550Show/hide
Query:  SRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQS
        SR +  L+P+TVKQI +AS + ++K+NF +NG++++ V +VG++  K +R TD++FT+DDGTG +   RW ND+ DTK+M +IQ+G YV VNG LK FQ 
Subjt:  SRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQS

Query:  NKQIFAFSVRPVTNFDEITFHFIECIHDHL
         +Q+ A+SVR +TNF+++T HF+ C+H HL
Subjt:  NKQIFAFSVRPVTNFDEITFHFIECIHDHL

Q6K9U2 Replication protein A 32 kDa subunit A4.5e-3342.59Show/hide
Query:  FSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHS---GEEKANFVINGVDITNVTVVGKVSEKAERNTD
        FS     S S FTSSQ+  + +T                 + S SR +   +P+TVKQISEA  S   GE+ A FV++GV+  NV +VG VS K ERNTD
Subjt:  FSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHS---GEEKANFVINGVDITNVTVVGKVSEKAERNTD

Query:  ITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTL
        ++FTIDDGTG +   RWVND  D+ +   +Q+GMYV V G LK  Q  K+  AF++RPVT+++E+T HFI+C+  HL N+K Q   G  +  + +  S+ 
Subjt:  ITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTL

Query:  KTPPSEQHT-VDVKKN
            SE  T   VK N
Subjt:  KTPPSEQHT-VDVKKN

Q8LFJ8 Replication protein A 32 kDa subunit B1.3e-3240.3Show/hide
Query:  SNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLK
        S+  +R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V +VG++S    R T + F +DDGTG + C RW +   +T++ME ++ GMYVR++GHLK
Subjt:  SNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLK

Query:  IFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQN---LNGEGSTQFQSSDSTLKTP-------PSEQ---HTVDVKKNCDELVLDYLQLPSSV
        IFQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+         + + Q   ST+ TP       PS Q      D      + VL+YL  P  +
Subjt:  IFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQN---LNGEGSTQFQSSDSTLKTP-------PSEQ---HTVDVKKNCDELVLDYLQLPSSV

Query:  L
        +
Subjt:  L

Q9ZQ19 Replication protein A 32 kDa subunit A3.9e-4542.86Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDI
        MFSS+QF+  SGF+      S  ++            +   S + +R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDI

Query:  TFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-----NLNGEGSTQFQ--
         FT+DDGTG I CKRWV++TFD ++ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q     ++    +T FQ  
Subjt:  TFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-----NLNGEGSTQFQ--

Query:  --SSDSTLKTP--PSEQHTVDVKKNCDELVLDYLQLPS
          ++ +TL  P   S+ +  + +KN D+++LDYL+ P+
Subjt:  --SSDSTLKTP--PSEQHTVDVKKNCDELVLDYLQLPS

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A22.8e-4642.86Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDI
        MFSS+QF+  SGF+      S  ++            +   S + +R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDI

Query:  TFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-----NLNGEGSTQFQ--
         FT+DDGTG I CKRWV++TFD ++ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q     ++    +T FQ  
Subjt:  TFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-----NLNGEGSTQFQ--

Query:  --SSDSTLKTP--PSEQHTVDVKKNCDELVLDYLQLPS
          ++ +TL  P   S+ +  + +KN D+++LDYL+ P+
Subjt:  --SSDSTLKTP--PSEQHTVDVKKNCDELVLDYLQLPS

AT2G24490.2 replicon protein A22.8e-4642.86Show/hide
Query:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDI
        MFSS+QF+  SGF+      S  ++            +   S + +R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++
Subjt:  MFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDI

Query:  TFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-----NLNGEGSTQFQ--
         FT+DDGTG I CKRWV++TFD ++ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q     ++    +T FQ  
Subjt:  TFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-----NLNGEGSTQFQ--

Query:  --SSDSTLKTP--PSEQHTVDVKKNCDELVLDYLQLPS
          ++ +TL  P   S+ +  + +KN D+++LDYL+ P+
Subjt:  --SSDSTLKTP--PSEQHTVDVKKNCDELVLDYLQLPS

AT3G02920.1 Replication protein A, subunit RPA329.3e-3440.3Show/hide
Query:  SNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLK
        S+  +R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V +VG++S    R T + F +DDGTG + C RW +   +T++ME ++ GMYVR++GHLK
Subjt:  SNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLK

Query:  IFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQN---LNGEGSTQFQSSDSTLKTP-------PSEQ---HTVDVKKNCDELVLDYLQLPSSV
        IFQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+         + + Q   ST+ TP       PS Q      D      + VL+YL  P  +
Subjt:  IFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQN---LNGEGSTQFQSSDSTLKTP-------PSEQ---HTVDVKKNCDELVLDYLQLPSSV

Query:  L
        +
Subjt:  L

AT3G02920.2 Replication protein A, subunit RPA323.0e-3236Show/hide
Query:  FGRMFSSTQFDSASGFTSSQS-----NESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEK
        +G  F      +  GF  SQ+       SS+ K   +       +    S+  +R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V +VG++S  
Subjt:  FGRMFSSTQFDSASGFTSSQS-----NESSTTKFAGTMIGTVLKLKKRGSNSLSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEK

Query:  AERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQN---LNGEGST
          R T + F +DDGTG + C RW +   +T++ME ++ GMYVR++GHLKIFQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+         + 
Subjt:  AERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQN---LNGEGST

Query:  QFQSSDSTLKTP-------PSEQ---HTVDVKKNCDELVLDYLQLPSSVL
        + Q   ST+ TP       PS Q      D      + VL+YL  P  ++
Subjt:  QFQSSDSTLKTP-------PSEQ---HTVDVKKNCDELVLDYLQLPSSVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTCTAGTTACCACCTACAGTTGTCACCACGAATTATGGGAACAAATACATCTACGTCATAAGAAGCGAGCGAGAGACTGGGCTCTATGGGCTCTGCAG
CTCACAAGAACTGGCGGGAAATCTAGCATCAATGGCGGGAAAACGGAAAGCTTCTACTTCATAAGATTTGGAAGAATGTTCTCCAGTACCCAGTTTGATTCCGCC
AGCGGATTTACGTCTTCTCAGTCCAATGAATCCTCTACAACGAAGTTCGCCGGAACGATGATCGGAACGGTGTTAAAATTGAAGAAACGGGGATCAAATTCACTT
AGTCGAGAATCGCCGGGCTTGGTTCCGGTAACTGTGAAACAGATTAGCGAAGCTTCACATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGGCGTTGACATT
ACAAATGTTACAGTCGTTGGGAAGGTATCAGAGAAAGCTGAAAGGAATACGGACATCACATTCACTATAGATGATGGAACAGGAACAATTGGTTGCAAAAGATGG
GTAAACGACACTTTTGACACCAAGCAAATGGAGGAAATACAAGATGGAATGTATGTACGGGTGAATGGGCATTTGAAAATATTTCAAAGTAACAAGCAAATTTTT
GCATTCTCCGTAAGGCCTGTAACAAATTTTGATGAAATTACCTTCCACTTTATTGAATGCATACACGACCACTTGCGGAATTCCAAGTTACAGAATCTCAATGGC
GAAGGATCAACACAGTTCCAATCCTCAGATTCAACTCTGAAGACTCCACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAACTGTGATGAATTGGTTCTCGAC
TATCTGCAGCTGCCCTCCAGCGTATTAGTTGTGACCTTGAGATTTGTTGTTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGTCTAGTTACCACCTACAGTTGTCACCACGAATTATGGGAACAAATACATCTACGTCATAAGAAGCGAGCGAGAGACTGGGCTCTATGGGCTCTGCAG
CTCACAAGAACTGGCGGGAAATCTAGCATCAATGGCGGGAAAACGGAAAGCTTCTACTTCATAAGATTTGGAAGAATGTTCTCCAGTACCCAGTTTGATTCCGCC
AGCGGATTTACGTCTTCTCAGTCCAATGAATCCTCTACAACGAAGTTCGCCGGAACGATGATCGGAACGGTGTTAAAATTGAAGAAACGGGGATCAAATTCACTT
AGTCGAGAATCGCCGGGCTTGGTTCCGGTAACTGTGAAACAGATTAGCGAAGCTTCACATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGGCGTTGACATT
ACAAATGTTACAGTCGTTGGGAAGGTATCAGAGAAAGCTGAAAGGAATACGGACATCACATTCACTATAGATGATGGAACAGGAACAATTGGTTGCAAAAGATGG
GTAAACGACACTTTTGACACCAAGCAAATGGAGGAAATACAAGATGGAATGTATGTACGGGTGAATGGGCATTTGAAAATATTTCAAAGTAACAAGCAAATTTTT
GCATTCTCCGTAAGGCCTGTAACAAATTTTGATGAAATTACCTTCCACTTTATTGAATGCATACACGACCACTTGCGGAATTCCAAGTTACAGAATCTCAATGGC
GAAGGATCAACACAGTTCCAATCCTCAGATTCAACTCTGAAGACTCCACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAACTGTGATGAATTGGTTCTCGAC
TATCTGCAGCTGCCCTCCAGCGTATTAGTTGTGACCTTGAGATTTGTTGTTGCATAG
Protein sequenceShow/hide protein sequence
MGSLVTTYSCHHELWEQIHLRHKKRARDWALWALQLTRTGGKSSINGGKTESFYFIRFGRMFSSTQFDSASGFTSSQSNESSTTKFAGTMIGTVLKLKKRGSNSL
SRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIF
AFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKTPPSEQHTVDVKKNCDELVLDYLQLPSSVLVVTLRFVVA