; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G097460 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G097460
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRRM domain-containing protein
Genome locationCiama_Chr05:28774205..28777394
RNA-Seq ExpressionCaUC05G097460
SyntenyCaUC05G097460
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141330.1 RNA-binding protein 2 isoform X1 [Cucumis sativus]5.3e-10770.27Show/hide
Query:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI--PPDYLQKDT
        MGDDAYTRYAAS DR                                          AGS ARSGLSTYSEAPPL SYPNSTSIDQWH   PPDY+ +DT
Subjt:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI--PPDYLQKDT

Query:  NSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSL-RTTECDPNSSRESNILFVGGLPTD
        NSLGPGAYGYTD+G     PEPVIGGVTSGGSA GY SPF DSLASQRQDI VGSSPGVMG ADIGHERANSL+L RT ECDP+  RESN+LFV GLPTD
Subjt:  NSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSL-RTTECDPNSSRESNILFVGGLPTD

Query:  CTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
        CTRREVGHLFRPF+GYKDIRVVHKEPRR+GDKAMVLCFVEFVEA++++AAME LQ        GYKFDDKKPDSP LKIQFAHFPF LPSN+DDRR
Subjt:  CTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

XP_008452748.1 PREDICTED: RNA-binding protein 2-like isoform X1 [Cucumis melo]5.3e-10771.19Show/hide
Query:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTN
        MGDDAYTRYAAS DR                                          AGS ARSGLSTYSEAPPL SYPNSTSIDQWH  PPDY+ +DTN
Subjt:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTN

Query:  SLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDC
        SLGPGAYGYTD+G     PEPVIGGVTSG SA GY SPF DSLASQRQDI VGSSPGVMG ADIGHERANSLS +RT ECDP S RESNILFV GLPTDC
Subjt:  SLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDC

Query:  TRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
        TRREVGHLFRPF+GYKDIRVVHKEPRRSGDKA VLCFVEFVEA++++AAME LQ        GYKFDDKKPDSPALKIQFAHFPFRLPSN+DDR+
Subjt:  TRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

XP_038896812.1 RNA-binding protein 2-like isoform X1 [Benincasa hispida]2.1e-11676.11Show/hide
Query:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNS
        MGDDAYTRYAAS DR                                          AGS ARSGLSTYSEAPPLTSYPNSTSIDQWHI PDYLQKDTNS
Subjt:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNS

Query:  LGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTR
        +GPGAYGYTDVG I N PEPVIG V SG SAKGYTSPFEDSLASQRQDI VGSSPGVMGMAD  HERANSLSLRT E DPNSSRESNILFV GLPTDCTR
Subjt:  LGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTR

Query:  REVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
        REVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEF+EARYAR AME LQ       AGYKFDDKKPDSP+LKIQFAHFPFRLPSN+DDRR
Subjt:  REVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

XP_038896813.1 RNA-binding protein 2-like isoform X2 [Benincasa hispida]8.1e-11675.77Show/hide
Query:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNS
        MGDDAYTRYAAS DR                                          AGS ARSGLSTYSEAPPLTSYPNSTSIDQWHI PDYLQKDTNS
Subjt:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNS

Query:  LGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTR
        +GPGAYGYTDVG I N PEPVIG V SG SAKGYTSPFEDSLASQRQDI VGSSPGVMGMAD  HERANSLSLRT E DPNSSRESNILFV GLPTDCTR
Subjt:  LGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTR

Query:  REVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
        REVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEF+EARYAR AME LQ        GYKFDDKKPDSP+LKIQFAHFPFRLPSN+DDRR
Subjt:  REVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

XP_038896814.1 nuclear speckle RNA-binding protein B-like isoform X3 [Benincasa hispida]8.1e-11675.77Show/hide
Query:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNS
        MGDDAYTRYAAS DR                                           GS ARSGLSTYSEAPPLTSYPNSTSIDQWHI PDYLQKDTNS
Subjt:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNS

Query:  LGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTR
        +GPGAYGYTDVG I N PEPVIG V SG SAKGYTSPFEDSLASQRQDI VGSSPGVMGMAD  HERANSLSLRT E DPNSSRESNILFV GLPTDCTR
Subjt:  LGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTR

Query:  REVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
        REVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEF+EARYAR AME LQ       AGYKFDDKKPDSP+LKIQFAHFPFRLPSN+DDRR
Subjt:  REVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

TrEMBL top hitse value%identityAlignment
A0A0A0L0S1 RRM domain-containing protein2.6e-10770.27Show/hide
Query:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI--PPDYLQKDT
        MGDDAYTRYAAS DR                                          AGS ARSGLSTYSEAPPL SYPNSTSIDQWH   PPDY+ +DT
Subjt:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI--PPDYLQKDT

Query:  NSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSL-RTTECDPNSSRESNILFVGGLPTD
        NSLGPGAYGYTD+G     PEPVIGGVTSGGSA GY SPF DSLASQRQDI VGSSPGVMG ADIGHERANSL+L RT ECDP+  RESN+LFV GLPTD
Subjt:  NSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSL-RTTECDPNSSRESNILFVGGLPTD

Query:  CTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
        CTRREVGHLFRPF+GYKDIRVVHKEPRR+GDKAMVLCFVEFVEA++++AAME LQ        GYKFDDKKPDSP LKIQFAHFPF LPSN+DDRR
Subjt:  CTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

A0A1S3BU06 RNA-binding protein 2-like isoform X12.6e-10771.19Show/hide
Query:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTN
        MGDDAYTRYAAS DR                                          AGS ARSGLSTYSEAPPL SYPNSTSIDQWH  PPDY+ +DTN
Subjt:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTN

Query:  SLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDC
        SLGPGAYGYTD+G     PEPVIGGVTSG SA GY SPF DSLASQRQDI VGSSPGVMG ADIGHERANSLS +RT ECDP S RESNILFV GLPTDC
Subjt:  SLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDC

Query:  TRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
        TRREVGHLFRPF+GYKDIRVVHKEPRRSGDKA VLCFVEFVEA++++AAME LQ        GYKFDDKKPDSPALKIQFAHFPFRLPSN+DDR+
Subjt:  TRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

A0A1S3BUL5 RNA-binding protein 2-like isoform X29.7e-10770.85Show/hide
Query:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTN
        MGDDAYTRYAAS DR                                           GS ARSGLSTYSEAPPL SYPNSTSIDQWH  PPDY+ +DTN
Subjt:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTN

Query:  SLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDC
        SLGPGAYGYTD+G     PEPVIGGVTSG SA GY SPF DSLASQRQDI VGSSPGVMG ADIGHERANSLS +RT ECDP S RESNILFV GLPTDC
Subjt:  SLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDC

Query:  TRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
        TRREVGHLFRPF+GYKDIRVVHKEPRRSGDKA VLCFVEFVEA++++AAME LQ        GYKFDDKKPDSPALKIQFAHFPFRLPSN+DDR+
Subjt:  TRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

A0A5D3D938 RNA-binding protein 2-like isoform X12.6e-10771.19Show/hide
Query:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTN
        MGDDAYTRYAAS DR                                          AGS ARSGLSTYSEAPPL SYPNSTSIDQWH  PPDY+ +DTN
Subjt:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTN

Query:  SLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDC
        SLGPGAYGYTD+G     PEPVIGGVTSG SA GY SPF DSLASQRQDI VGSSPGVMG ADIGHERANSLS +RT ECDP S RESNILFV GLPTDC
Subjt:  SLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDC

Query:  TRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
        TRREVGHLFRPF+GYKDIRVVHKEPRRSGDKA VLCFVEFVEA++++AAME LQ        GYKFDDKKPDSPALKIQFAHFPFRLPSN+DDR+
Subjt:  TRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

A0A6J1CBB3 uncharacterized protein LOC1110099332.5e-10268.37Show/hide
Query:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPL-TSYPNSTSIDQWHIPPDYLQKDTN
        MGDDAY+RYAAS DR                                           GS ARS  STYSEAPPL TSYPN+ SIDQWH PPDYLQKDTN
Subjt:  MGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSLALAAGSAARSGLSTYSEAPPL-TSYPNSTSIDQWHIPPDYLQKDTN

Query:  SLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCT
        S G GAYGY D+G+I N PEPVIGGVTSG +AKGYTSPFEDSLASQRQ+I VGSSPG++GMAD+GHERA+SL LR  EC P S+RESNILFV GLPTDCT
Subjt:  SLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCT

Query:  RREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
        RREVGHLFRPFIGYKDIRVVHKEPRRSGDKA VLCFVEFVEA+ A AAM  LQ        GYKFDDKKPDSPALK+ FAHFPFRLPSN++D R
Subjt:  RREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A1.1e-1741.35Show/hide
Query:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFP
        S  SN L+V GLP++C+RREV H+FRPF+GY+++R+V K+ +      +VLCFV+F     A  A+  LQ        GY+ D+ + DS  L++QF+  P
Subjt:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFP

Query:  FRLP
           P
Subjt:  FRLP

F4HWF9 Nuclear speckle RNA-binding protein B4.3e-1939.85Show/hide
Query:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSA
        D+G  + +S+     E  P     SN L+V GLP++C+RREV H+FRPF+GY+++R+V ++ + RSGD   VLCFV+F  +  A  A+  LQD       
Subjt:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSA

Query:  GYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
         Y+ D+ +PDS  L++QF   P   P     RR
Subjt:  GYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

G7ID19 RNA-binding protein 23.7e-1835.63Show/hide
Query:  VIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADI----------GHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPF
        VIGGV   G A+G       SL        +G   GV G  D+          G    +++S    E  P     S+ L+V GLP+D T+REV H+FRPF
Subjt:  VIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADI----------GHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPF

Query:  IGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFR
        +GY+++R+V KE +  G   ++LCFV+F     A  A+  LQ        GYK D+  P+S  L++QF+  P R
Subjt:  IGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFPFR

Q6JB11 Protein MATERNALLY EXPRESSED GENE 51.1e-1444.32Show/hide
Query:  SNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPA
        S+ L++ GLP +CTRREV H+FRPF+G++++R+V+KE R  G    VLCFV+F     A  A+E LQ        G+  DD    +PA
Subjt:  SNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPA

Q8H0P8 RNA-binding protein 14.3e-1945.36Show/hide
Query:  SNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFP
        S  L++ GLP+DCTRREV H+FRPF+GY+++R+V KE +  GD  ++LCFV+F     A  A+  LQ        GYK D+  P+S  L++QF+ +P
Subjt:  SNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFP

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding3.1e-2039.85Show/hide
Query:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSA
        D+G  + +S+     E  P     SN L+V GLP++C+RREV H+FRPF+GY+++R+V ++ + RSGD   VLCFV+F  +  A  A+  LQD       
Subjt:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSA

Query:  GYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
         Y+ D+ +PDS  L++QF   P   P     RR
Subjt:  GYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

AT1G21320.2 nucleotide binding;nucleic acid binding3.1e-2039.85Show/hide
Query:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSA
        D+G  + +S+     E  P     SN L+V GLP++C+RREV H+FRPF+GY+++R+V ++ + RSGD   VLCFV+F  +  A  A+  LQD       
Subjt:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSA

Query:  GYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR
         Y+ D+ +PDS  L++QF   P   P     RR
Subjt:  GYKFDDKKPDSPALKIQFAHFPFRLPSNYDDRR

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.6e-1941.35Show/hide
Query:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFP
        S  SN L+V GLP++C+RREV H+FRPF+GY+++R+V K+ +      +VLCFV+F     A  A+  LQ        GY+ D+ + DS  L++QF+  P
Subjt:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFP

Query:  FRLP
           P
Subjt:  FRLP

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.6e-1941.35Show/hide
Query:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFP
        S  SN L+V GLP++C+RREV H+FRPF+GY+++R+V K+ +      +VLCFV+F     A  A+  LQ        GY+ D+ + DS  L++QF+  P
Subjt:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFAHFP

Query:  FRLP
           P
Subjt:  FRLP

AT4G02430.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.3e-0433.66Show/hide
Query:  SSRESNILFVGGLPTDCTRREVGHLFRPF--IGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFA
        SSR S  ++VG LP D   REV  LF  +  +   D+++    PR  G       FVEF +AR A        D+ +Y   GY FD        L+++ A
Subjt:  SSRESNILFVGGLPTDCTRREVGHLFRPF--IGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPALKIQFA

Query:  H
        H
Subjt:  H


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAATTGGTGGAGGTGGCCACCGAAGCTGGCCATCCACGATGGTGGTCAAATGTGGCTAGAGTTGGACGTCAGCAGTGGTCACTGAAGCGTGGGAGAAGTGGAGA
AGAGACGAGGCCGGGGGAGGGTTGCGGTTGCAGCCGAAGCGGAGCAGGCGGCCAAGCCATGGGAGACGATGCTTATACCAGATACGCCGCCTCAGTAGATAGAGAAAAGG
ATGGGAAATGGAAGAGCCTCTCTTCTCCTTATGCAAATATTTTTCCTGTACATGGTTTGTGGAGAACCTATTCTGCAAACAGCGCACTTGAAACTGATGTTCAATCGTTG
GCTCTTGCAGCAGGAAGTGCAGCGAGGTCTGGCCTTTCAACCTACTCTGAAGCACCTCCTTTGACATCTTATCCTAATTCGACCTCTATTGATCAGTGGCACATCCCTCC
TGATTATTTGCAAAAAGATACCAATTCGTTAGGACCTGGAGCTTATGGATATACTGACGTAGGAAACATTGGTAATTGTCCGGAACCAGTTATTGGCGGTGTGACATCCG
GAGGGAGTGCAAAAGGGTACACATCTCCTTTCGAAGATTCGTTAGCAAGTCAAAGACAAGATATTGTAGTGGGCAGTAGTCCAGGAGTGATGGGTATGGCCGACATAGGT
CATGAAAGGGCCAATTCTCTCAGTCTCAGAACTACTGAATGTGATCCAAATTCATCTCGGGAATCAAACATCCTTTTCGTTGGTGGACTTCCTACAGATTGTACTAGGAG
AGAAGTAGGCCATCTTTTCCGCCCCTTTATTGGCTACAAAGATATCAGAGTTGTTCACAAGGAGCCCAGACGAAGTGGAGATAAAGCTATGGTATTATGCTTTGTTGAGT
TCGTTGAAGCAAGATATGCCCGGGCAGCAATGGAAACTCTTCAAGATAATCTGATGTATAAATCTGCAGGTTACAAGTTCGATGACAAAAAACCTGATTCCCCTGCTTTG
AAGATTCAATTTGCACATTTTCCTTTCCGTTTACCATCTAACTACGATGACAGGCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAATTGGTGGAGGTGGCCACCGAAGCTGGCCATCCACGATGGTGGTCAAATGTGGCTAGAGTTGGACGTCAGCAGTGGTCACTGAAGCGTGGGAGAAGTGGAGA
AGAGACGAGGCCGGGGGAGGGTTGCGGTTGCAGCCGAAGCGGAGCAGGCGGCCAAGCCATGGGAGACGATGCTTATACCAGATACGCCGCCTCAGTAGATAGAGAAAAGG
ATGGGAAATGGAAGAGCCTCTCTTCTCCTTATGCAAATATTTTTCCTGTACATGGTTTGTGGAGAACCTATTCTGCAAACAGCGCACTTGAAACTGATGTTCAATCGTTG
GCTCTTGCAGCAGGAAGTGCAGCGAGGTCTGGCCTTTCAACCTACTCTGAAGCACCTCCTTTGACATCTTATCCTAATTCGACCTCTATTGATCAGTGGCACATCCCTCC
TGATTATTTGCAAAAAGATACCAATTCGTTAGGACCTGGAGCTTATGGATATACTGACGTAGGAAACATTGGTAATTGTCCGGAACCAGTTATTGGCGGTGTGACATCCG
GAGGGAGTGCAAAAGGGTACACATCTCCTTTCGAAGATTCGTTAGCAAGTCAAAGACAAGATATTGTAGTGGGCAGTAGTCCAGGAGTGATGGGTATGGCCGACATAGGT
CATGAAAGGGCCAATTCTCTCAGTCTCAGAACTACTGAATGTGATCCAAATTCATCTCGGGAATCAAACATCCTTTTCGTTGGTGGACTTCCTACAGATTGTACTAGGAG
AGAAGTAGGCCATCTTTTCCGCCCCTTTATTGGCTACAAAGATATCAGAGTTGTTCACAAGGAGCCCAGACGAAGTGGAGATAAAGCTATGGTATTATGCTTTGTTGAGT
TCGTTGAAGCAAGATATGCCCGGGCAGCAATGGAAACTCTTCAAGATAATCTGATGTATAAATCTGCAGGTTACAAGTTCGATGACAAAAAACCTGATTCCCCTGCTTTG
AAGATTCAATTTGCACATTTTCCTTTCCGTTTACCATCTAACTACGATGACAGGCGATGA
Protein sequenceShow/hide protein sequence
MSQLVEVATEAGHPRWWSNVARVGRQQWSLKRGRSGEETRPGEGCGCSRSGAGGQAMGDDAYTRYAASVDREKDGKWKSLSSPYANIFPVHGLWRTYSANSALETDVQSL
ALAAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIG
HERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFVEARYARAAMETLQDNLMYKSAGYKFDDKKPDSPAL
KIQFAHFPFRLPSNYDDRR