; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G097730 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G097730
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionGibberellin regulated protein
Genome locationCiama_Chr05:28976821..28983412
RNA-Seq ExpressionCaUC05G097730
SyntenyCaUC05G097730
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3476318.1 gibberellin-regulated protein 11-like [Gossypium australe]5.5e-4639.94Show/hide
Query:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MAI K  + + L    LL L  AD+   + ++  R  T P K   IDCGGACA+RC+LSSRP+LCKRACGTCCARC+CVPPGT+G  E CPCYA++TTHG
Subjt:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRK----------------------------------------------------------------------STKGL---------------------
        GRRK                                                                      S  G+                     
Subjt:  GRRK----------------------------------------------------------------------STKGL---------------------

Query:  ---------------------VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPHE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNY
                             + A LLI+  +LL  +ES    MVIT  V+     + IDC EAC  RC+LSSRP +CKRACGTCC RC CVPPGTSGNY
Subjt:  ---------------------VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPHE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNY

Query:  DVCPCYANMTTHGGRHKC
        DVCPCY +MTTHGG+HKC
Subjt:  DVCPCYANMTTHGGRHKC

KAG8492134.1 hypothetical protein CXB51_015749 [Gossypium anomalum]2.2e-4742.57Show/hide
Query:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDR-VATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTH
        MAI K   IA L IS LLL   A   +++V S  +   T P K   IDCGGACA+RC+LSSRP+LCKRACGTCCARC+CVPPGT+G  E CPCYA++TTH
Subjt:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDR-VATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTH

Query:  GGRRKSTKGL------------------------------------------------------------------------------------------
        GGRRK+ + +                                                                                          
Subjt:  GGRRKSTKGL------------------------------------------------------------------------------------------

Query:  ------VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPHE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGR
              + A LLI+  +LL  +ES    MVIT  V+     + IDC EAC  RC+LSSRP +CKRACGTCC RC CVPPGTSGNYDVCPCY +MTTHGG+
Subjt:  ------VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPHE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGR

Query:  HKC
        HKC
Subjt:  HKC

KAG8494278.1 hypothetical protein CXB51_011657 [Gossypium anomalum]5.0e-5553.04Show/hide
Query:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MAI    LIA L I SLLL    +  +++V    R  T+P K   IDCGGACA+RC+LSSRP+LCKRACGTCCARC+CVPPGT+G  E CPCYA++TTHG
Subjt:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRKS--------------------------TKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPL--PHEIDCGEACDARCRLSSRPKVCKRACGTCCGR
        G+RK                            K L+ ++LL  F +     S  +VI   V+       +IDCG AC  RC+LSSRP +CKRACGTCC R
Subjt:  GRRKS--------------------------TKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPL--PHEIDCGEACDARCRLSSRPKVCKRACGTCCGR

Query:  CQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        C CVPPGT  NYDVCPCY +MTTHGGRHKC
Subjt:  CQCVPPGTSGNYDVCPCYANMTTHGGRHKC

RYR00948.1 hypothetical protein Ahy_B06g079823 [Arachis hypogaea]2.6e-4849.3Show/hide
Query:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MA+ K LL + L    ++ L  AD                  +Q IDC GACA+RC+LSSRPNLC+RACGTCC RC+CVPPGT+G  E CPCYA++TTHG
Subjt:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRK-------------STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVC
        GRRK             +    + A +LI+  +L ++ES                IDC   C  RC LSSRP +C+RACGTCC RC CVP GTSG+Y+ C
Subjt:  GRRK-------------STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVC

Query:  PCYANMTTHGGRHKC
        PCYAN TTHGG HKC
Subjt:  PCYANMTTHGGRHKC

XP_038900123.1 gibberellin-regulated protein 1-like [Benincasa hispida]2.1e-4590.82Show/hide
Query:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        +T GLVFAML IAF MLLLMESGQMVITTQVDNPLPHEIDC +ACDARCRLSSR K+CKRACGTCC RCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
Subjt:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

TrEMBL top hitse value%identityAlignment
A0A1S3CRE3 gibberellin-regulated protein 1-like3.8e-4590.82Show/hide
Query:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        +TKGLVF MLLIAFAM LLMESGQM+ITTQVDNPLP EIDCG+ACDARCRLSSR K+CKRACGTCC RCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
Subjt:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

A0A444YG93 Uncharacterized protein1.3e-4849.3Show/hide
Query:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MA+ K LL + L    ++ L  AD                  +Q IDC GACA+RC+LSSRPNLC+RACGTCC RC+CVPPGT+G  E CPCYA++TTHG
Subjt:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRK-------------STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVC
        GRRK             +    + A +LI+  +L ++ES                IDC   C  RC LSSRP +C+RACGTCC RC CVP GTSG+Y+ C
Subjt:  GRRK-------------STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVC

Query:  PCYANMTTHGGRHKC
        PCYAN TTHGG HKC
Subjt:  PCYANMTTHGGRHKC

A0A5A7V5C1 Gibberellin-regulated protein 1-like3.8e-4590.82Show/hide
Query:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        +TKGLVF MLLIAFAM LLMESGQM+ITTQVDNPLP EIDCG+ACDARCRLSSR K+CKRACGTCC RCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
Subjt:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

A0A5B6W509 Gibberellin-regulated protein 11-like2.7e-4639.94Show/hide
Query:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MAI K  + + L    LL L  AD+   + ++  R  T P K   IDCGGACA+RC+LSSRP+LCKRACGTCCARC+CVPPGT+G  E CPCYA++TTHG
Subjt:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRK----------------------------------------------------------------------STKGL---------------------
        GRRK                                                                      S  G+                     
Subjt:  GRRK----------------------------------------------------------------------STKGL---------------------

Query:  ---------------------VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPHE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNY
                             + A LLI+  +LL  +ES    MVIT  V+     + IDC EAC  RC+LSSRP +CKRACGTCC RC CVPPGTSGNY
Subjt:  ---------------------VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPHE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNY

Query:  DVCPCYANMTTHGGRHKC
        DVCPCY +MTTHGG+HKC
Subjt:  DVCPCYANMTTHGGRHKC

A0A803QWJ7 Uncharacterized protein2.2e-4850.99Show/hide
Query:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MA+ K L+I+ LF   +L +  AD+T     ++  VA   +K ++IDCGG+CA+RC+LSSRP LCKRACGTCC RC+CVPPGT+G  E        +T  
Subjt:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRKSTKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRH
                                        + + +PLP +IDC  ACDARC  SSRP++CKRACGTCC RC CVPPGTSGNYD CPCYANMTTHGGRH
Subjt:  GRRKSTKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRH

Query:  KC
        KC
Subjt:  KC

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 112.2e-2158.16Show/hide
Query:  LLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK
        +L+A L I SLL+L F      MV S D           IDC   C  RC LSSRPNLC RACGTCCARC+CV PGTSG Y+ CPCY ++TTHGGRRK
Subjt:  LLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK

P46687 Gibberellin-regulated protein 36.0e-1964.52Show/hide
Query:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK
        +  IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA++TT GGR K
Subjt:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK

P46688 Gibberellin-regulated protein 22.7e-1967.21Show/hide
Query:  EIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        +IDCG  C  RC  SSR K+C RAC +CC RC CVPPGTSGN  +CPCYA++TTHGGR KC
Subjt:  EIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

P46689 Gibberellin-regulated protein 19.5e-2559.14Show/hide
Query:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        + A LLI+  +L L+++   V  +Q  N    +IDCG AC ARCRLS RP++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KC
Subjt:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

Q93X17 Snakin-21.5e-2555.96Show/hide
Query:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPV-----KIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MAI K      LF S LL L   ++   +    D+V +N +       + IDCGGACA+RC+LSSRP LC RACGTCCARC+CVPPGTSG  ETCPCYA+
Subjt:  MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPV-----KIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRK
        +TTHG +RK
Subjt:  MTTHGGRRK

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 16.7e-2659.14Show/hide
Query:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        + A LLI+  +L L+++   V  +Q  N    +IDCG AC ARCRLS RP++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KC
Subjt:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

AT1G75750.2 GAST1 protein homolog 14.0e-2658.06Show/hide
Query:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        + A LLI+  +L L+++ +    +Q  N    +IDCG AC ARCRLS RP++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KC
Subjt:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

AT2G18420.1 Gibberellin-regulated family protein1.6e-2258.16Show/hide
Query:  LLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK
        +L+A L I SLL+L F      MV S D           IDC   C  RC LSSRPNLC RACGTCCARC+CV PGTSG Y+ CPCY ++TTHGGRRK
Subjt:  LLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK

AT4G09600.1 GAST1 protein homolog 34.2e-2064.52Show/hide
Query:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK
        +  IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA++TT GGR K
Subjt:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK

AT4G09610.1 GAST1 protein homolog 21.9e-2067.21Show/hide
Query:  EIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        +IDCG  C  RC  SSR K+C RAC +CC RC CVPPGTSGN  +CPCYA++TTHGGR KC
Subjt:  EIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTCCTAAACCTCTACTTATCGCTTGTCTTTTCATCTCATCCCTTCTCCTTCTTTGTTTTGCTGATGAAACAAATAAGATGGTAAACTCAATGGATCGTGTTGC
GACTAACCCTGTTAAGATTCAAAACATTGATTGTGGAGGAGCTTGTGCGTCAAGGTGCAAATTATCGTCAAGGCCGAACCTATGCAAGAGGGCATGCGGCACGTGCTGTG
CACGTTGCAGCTGCGTGCCTCCGGGCACTTCTGGCGGCTACGAAACCTGCCCTTGCTATGCCAACATGACCACTCACGGCGGCCGGAGAAAGTCAACTAAAGGTCTTGTG
TTTGCTATGCTTCTCATTGCTTTTGCTATGCTGCTCCTTATGGAATCAGGCCAAATGGTTATCACAACTCAGGTGGATAACCCTCTTCCTCACGAGATAGATTGTGGGGA
GGCTTGTGATGCGAGGTGCCGATTATCGTCGAGGCCGAAGGTCTGCAAGAGGGCATGTGGAACCTGTTGTGGTCGCTGTCAATGTGTTCCACCAGGCACTTCAGGCAACT
ACGATGTTTGTCCCTGCTATGCCAATATGACCACACATGGTGGCAGGCACAAATGTTCTGAAATGTTCAAAAACTATGCAAGAGAGATGCAGGGGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATTCATTCTACGTCCCCCAAACACTCCTGATTTCTAACTTCTCTCTCCATCTTCAATCCCATGGCCATTCCTAAACCTCTACTTATCGCTTGTCTTTTCATCTCATCCCT
TCTCCTTCTTTGTTTTGCTGATGAAACAAATAAGATGGTAAACTCAATGGATCGTGTTGCGACTAACCCTGTTAAGATTCAAAACATTGATTGTGGAGGAGCTTGTGCGT
CAAGGTGCAAATTATCGTCAAGGCCGAACCTATGCAAGAGGGCATGCGGCACGTGCTGTGCACGTTGCAGCTGCGTGCCTCCGGGCACTTCTGGCGGCTACGAAACCTGC
CCTTGCTATGCCAACATGACCACTCACGGCGGCCGGAGAAAGTCAACTAAAGGTCTTGTGTTTGCTATGCTTCTCATTGCTTTTGCTATGCTGCTCCTTATGGAATCAGG
CCAAATGGTTATCACAACTCAGGTGGATAACCCTCTTCCTCACGAGATAGATTGTGGGGAGGCTTGTGATGCGAGGTGCCGATTATCGTCGAGGCCGAAGGTCTGCAAGA
GGGCATGTGGAACCTGTTGTGGTCGCTGTCAATGTGTTCCACCAGGCACTTCAGGCAACTACGATGTTTGTCCCTGCTATGCCAATATGACCACACATGGTGGCAGGCAC
AAATGTTCTGAAATGTTCAAAAACTATGCAAGAGAGATGCAGGGGACTTAA
Protein sequenceShow/hide protein sequence
MAIPKPLLIACLFISSLLLLCFADETNKMVNSMDRVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKSTKGLV
FAMLLIAFAMLLLMESGQMVITTQVDNPLPHEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKCSEMFKNYAREMQGT