; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G098300 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G098300
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Genome locationCiama_Chr05:29541661..29544885
RNA-Seq ExpressionCaUC05G098300
SyntenyCaUC05G098300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147861.1 uncharacterized protein LOC101222738 [Cucumis sativus]8.6e-6486.81Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEK-KMEYGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEK K   G NLQRSASMPPFNT+KGL  +M+SET LEKP+KN 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEK-KMEYGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGG+SA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

XP_008466545.1 PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo]2.3e-6486.81Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEK+ E  G NLQRSASMPPFNT+KGLL +++SET LEKP+KN 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGG+SA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

XP_022940046.1 uncharacterized protein LOC111445795 [Cucurbita moschata]1.1e-5882.19Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLSDMESETKLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAIL P++S EE KK+E+GG NLQRS+S+PPFNT+KG L DMESE  L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLSDMESETKLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGG+ A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

XP_022982140.1 uncharacterized protein LOC111481065 [Cucurbita maxima]3.8e-5982.88Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLSDMESETKLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAIL P++S EE KK+E+GG NLQRS+S+PPFNT+KGLL DMESE  L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLSDMESETKLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGG+ A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

XP_038898962.1 uncharacterized protein LOC120086405 [Benincasa hispida]1.6e-6590.21Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKMEYGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNAW
        MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEKKME GGNLQRSAS+PPF T KGLL +MESE  LEKPKKNAW
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKMEYGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNAW

Query:  WRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLG GG+SA
Subjt:  WRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

TrEMBL top hitse value%identityAlignment
A0A0A0LDC2 Uncharacterized protein4.2e-6486.81Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEK-KMEYGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEK K   G NLQRSASMPPFNT+KGL  +M+SET LEKP+KN 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEK-KMEYGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGG+SA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

A0A1S3CST6 uncharacterized protein LOC1035039301.1e-6486.81Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEK+ E  G NLQRSASMPPFNT+KGLL +++SET LEKP+KN 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGG+SA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

A0A5D3D820 Putative DNA polymerase epsilon catalytic subunit A1.1e-6486.81Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEK+ E  G NLQRSASMPPFNT+KGLL +++SET LEKP+KN 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGG+SA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

A0A6J1FHE8 uncharacterized protein LOC1114457955.3e-5982.19Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLSDMESETKLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAIL P++S EE KK+E+GG NLQRS+S+PPFNT+KG L DMESE  L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLSDMESETKLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGG+ A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

A0A6J1J1T2 uncharacterized protein LOC1114810651.8e-5982.88Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLSDMESETKLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAIL P++S EE KK+E+GG NLQRS+S+PPFNT+KGLL DMESE  L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLSDMESETKLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGG+ A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein3.7e-2042.86Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQ-VHEEHLRAILRPYESYEEKKMEYGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA
        MGSLM+GWDS   DP+ V  RR KSLT+EEI+ FWKTKK+   EEH++A              +   + +  +      KK +    E+++     K + 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQ-VHEEHLRAILRPYESYEEKKMEYGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA
        WWR++ WAFLNEP E EG  N+YVSQF VA++A
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTCTAATGGCTGGTTGGGACTCCCCGGCGACTGACCCCCAAGAAGTGAGTCACCGGAGGAATAAATCGTTGACAAAAGAAGAGATTGAAGCGTTCTGGAAAAC
GAAGAAACAAGTGCATGAAGAACATCTAAGAGCCATTTTAAGGCCATATGAGAGCTATGAGGAAAAGAAAATGGAATATGGTGGAAATCTTCAGAGATCAGCCTCTATGC
CACCATTCAATACAAAGAAGGGTTTATTATCGGACATGGAATCTGAAACTAAGCTAGAAAAGCCGAAGAAAAACGCCTGGTGGAGAAGAAGCAACTGGGCGTTTCTAAAC
GAACCGCCGGAGACGGAAGGATCTGGTAACAGCTACGTGTCGCAGTTCCACGTGGCAAACATGGCGGCTTCCAGACTTGGTCGTGGTGGCATCAGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ACACAAAACCACGATATTGAAAGTTAATAAATTAATTAACATATCGTTATCAATCAATAAAATGGCCACCAAAGCCATTACTTCATTAAAATCAACATACTAAAGGCTAC
AAAAATAAATTTTAATATAATGTTTTAGATAAGATCGGAGCCAAGAGATAAAGACACACTGCTCGCCAGACGCCATCTTTTTATTTATATATATTGTTTGCTCTTCGTAC
TAAGAAACCATTACATATTATCATACATCTGATTTATCACCATTAATATTTTGAACCAAAAGTTTTGTTTTTGAGAGATGGGTTCTCTAATGGCTGGTTGGGACTCCCCG
GCGACTGACCCCCAAGAAGTGAGTCACCGGAGGAATAAATCGTTGACAAAAGAAGAGATTGAAGCGTTCTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTAAGAGC
CATTTTAAGGCCATATGAGAGCTATGAGGAAAAGAAAATGGAATATGGTGGAAATCTTCAGAGATCAGCCTCTATGCCACCATTCAATACAAAGAAGGGTTTATTATCGG
ACATGGAATCTGAAACTAAGCTAGAAAAGCCGAAGAAAAACGCCTGGTGGAGAAGAAGCAACTGGGCGTTTCTAAACGAACCGCCGGAGACGGAAGGATCTGGTAACAGC
TACGTGTCGCAGTTCCACGTGGCAAACATGGCGGCTTCCAGACTTGGTCGTGGTGGCATCAGTGCTTGAGAAAGCTTTTTATCGTTTGTAAATTAATTAGTTGCATTAGA
ATTGTTCTGAATTTCAGTGGACAGTTTGTAAATGGATAATGGGTATTTTTCTTTTTTTCTTCTTTGAAATCAATTTAGAGTGAATTTGGTTGGAGTTATTTTTCAATTAT
TTAATCAGAGGAGTGTATTTGCAGTGGTAGTGGGTGTGTTGTGTACATCATGAGAAAAGGAGAAGATAAGGTCCAAAATATCAATGCTTCCCCCAAAATCCAAAGGGGGA
TAACATTCCAATTATTGACCCAATAAAAAATATATATATTACGAAAGACACACCAAACCCATTTCCCAATTCTTTGTTTCTCTCTTTACATTACATTCAGATTCTTCATT
CCATGTCTACACCTGAAATTGAAGCATTTCCCTCACTCTCTCTCTCTCTGTTCCTCCTAATAAACCCTATTAGTACGAAATGAGATCTTGAGATTTCTTAATCAAAATGA
GAGGAAGAGAGAGCGCGAGAGAGATGAGAGTTATTGTGAAGGAGAGGAAGAGAGAGGGCGTGCATCATCATGAGACCACTTAGTTGTATTTTTAAACGGTCATTTCATTC
CCTCCTAAGACCTCTCGCGACTCGTTTTCGTTCCATCTTAAAAAAGAATATTTTATGTACCACCATATCGAATGAAAAACTGATTCTCTTGAAAAAAAAATTAAACATAA
AATTGTAAATCACAAATCTATTAAAATCTTGTTTCTCTCTCCTCTCTCGCTGGTCTTTCTCGTTCTCTCTCGTTCTTGTTAGTCTTTCTCACTCTTGCTCTTGCTTACTT
TCTTCGCTCACAATAATTCTTATCTATTTTCCTCTCTTGCTCTTCACGGAAAAAGTTTTGATCACTGTCATTTTTTCTTGCATCTAACTGCAAAGCACTTATTCTGATTT
CAAGAAAACCTCATTGGGAAGATG
Protein sequenceShow/hide protein sequence
MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKMEYGGNLQRSASMPPFNTKKGLLSDMESETKLEKPKKNAWWRRSNWAFLN
EPPETEGSGNSYVSQFHVANMAASRLGRGGISA