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CaUC05G100120 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G100120
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionElongation factor
Genome locationCiama_Chr05:31040323..31044610
RNA-Seq ExpressionCaUC05G100120
SyntenyCaUC05G100120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY15758.1 Uncharacterized protein TCM_034727 [Theobroma cacao]1.3e-1062.3Show/hide
Query:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIGGGF
        L+KL +DV++CEYEDVHVMWEML+RNET+  +G S RR K+R L N F WAR AP +  GF
Subjt:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIGGGF

KAE8649878.1 hypothetical protein Csa_012522 [Cucumis sativus]2.2e-1360.44Show/hide
Query:  NQRNGRIGIGERRIWRMRLGGKRLIFRITFRCEFYVPSDLRDLSVSSLFKLFSHWSRSR-EFENGMVEEDDFSVAKFYLQSRRSSRISQTR
        +QRNG +GIGERR  R+RLGGKR  F I              L+  SLF LFSHWSRSR E +NGMV++D+ SV KFYLQSR SSRISQTR
Subjt:  NQRNGRIGIGERRIWRMRLGGKRLIFRITFRCEFYVPSDLRDLSVSSLFKLFSHWSRSR-EFENGMVEEDDFSVAKFYLQSRRSSRISQTR

KAG6591414.1 hypothetical protein SDJN03_13760, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1155.84Show/hide
Query:  SSRISQTRIYAIRI-----LNSKRLVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARS
        S   S  R ++ RI        + L+KLGRDV+ACEY DV VMWEM+KRNE  +V+G+ ERRRKRRSL NI WW  S
Subjt:  SSRISQTRIYAIRI-----LNSKRLVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARS

KAG6608437.1 hypothetical protein SDJN03_01779, partial [Cucurbita argyrosperma subsp. sororia]7.8e-1979.03Show/hide
Query:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSE-RRRKRRSLWNIFWWARSAPCIGGGF
        L+KLGRDVKACEYEDVHVMWEMLKRNET + +G+ E RRRK+R +WNIFWWARSAPCIG  F
Subjt:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSE-RRRKRRSLWNIFWWARSAPCIGGGF

KAG7024293.1 hypothetical protein SDJN02_13107, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-1455.29Show/hide
Query:  SSRISQTRIYAIRI-----LNSKRLVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIGGGF
        S   S  R ++ RI        + L+KLGRDV+ACEY DV VMWEM+KRNE  +V+G+ ERRRKRRSL NI WW  S  CIG  F
Subjt:  SSRISQTRIYAIRI-----LNSKRLVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIGGGF

TrEMBL top hitse value%identityAlignment
A0A059BJK4 Uncharacterized protein1.1e-1060Show/hide
Query:  VKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIGGGF
        +KL  DV+ CEY+DVHVMWEML+RNE +  I  S RR K RS W+IF WAR APC+   F
Subjt:  VKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIGGGF

A0A061FFT5 Uncharacterized protein6.4e-1162.3Show/hide
Query:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIGGGF
        L+KL +DV++CEYEDVHVMWEML+RNET+  +G S RR K+R L N F WAR AP +  GF
Subjt:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIGGGF

A0A0A0L522 Uncharacterized protein8.6e-2491.38Show/hide
Query:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIG
        LVKLGRDVKACEYEDVHVMWEMLKRNETDQ+IG SERR+KR+SLWNIFWWARSAPC+G
Subjt:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIG

A0A218WD46 uncharacterized protein LOC1162151542.4e-1056.67Show/hide
Query:  LNSKRLVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAP
        + ++ L+KL +DV+ CEY+DVHVMW MLK+NET +   LS +RRK+RS W+ F WAR AP
Subjt:  LNSKRLVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAP

A0A7N2RF01 Uncharacterized protein1.1e-1060Show/hide
Query:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIGGG
        L+KL  DV  CEYEDV VMWEMLKR+ET+QV+     + K+RS WNIF WAR  PC+  G
Subjt:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43150.1 unknown protein1.4e-0537.5Show/hide
Query:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRS-LWNI
        L++L  DV +CEYED+H+MW +L +NE    + + +++++R+   WN+
Subjt:  LVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRS-LWNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCTTTTATCTCGTAAATGGAGAATATGGAGTGGTTTTTTGAAACAGAATTCCATGGACCAAGAAATTAGAGTGGACCAAACCATCGCATATTTCTACTTT
GCAGACCAAGTGTTTGATAAAATGTCTCACTACAGTAATCCACTCTTCCAAGCTTTCTATTATGCCCATCGCGCCATGTGTTGTTGGGAGGTGTCACGACATGAA
CAAAACTCTCACCGCTTACTTGCCACATGTGCTCACTTCATAGGGCGAAAAGCAGAGGATGAGACAACTTTGAGTGTTTCGTTTTCCAACTTCCATAATAATCGC
TTTGGCCGTACAGTGTTTTTCCACTTTTATTCGTGCTATCATCACTGGCTCCCATTTTATCCGACGGCGAAGAAACTCCTATATATATGCAAAGAGTTCTGCTCT
GGGGCGACCTGGTTGATTCTGAATTTGGAACCCTTCCTTGGGAAATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAACCTGGAGAAACAAA
AGTCCTCCAGAGATGCCAAATATGATAACTGAGATGATTATTACTGTAACCGCTTTCGTGTTTCTTTCTTCCTTGAAGTCAGCTGGAAACAAACAAGAAAGCCAT
GACAATACAGGTCCCAAGTGGATCTTCATAAATCAACGCAACGGTCGCATTGGAATCGGTGAAAGGCGGATCTGGAGAATGAGATTGGGCGGAAAGCGGTTAATA
TTTCGAATTACGTTCCGCTGTGAATTTTATGTTCCTTCAGATTTGAGAGATCTTAGCGTCTCTTCTCTCTTTAAACTCTTCTCTCACTGGAGTAGAAGCAGAGAA
TTCGAGAATGGAATGGTGGAGGAAGATGACTTCTCCGTTGCGAAGTTTTACCTTCAGAGTCGCCGCTCGTCTCGGATTTCGCAAACGCGAATATATGCTATACGG
ATTCTCAATTCCAAGCGGCTAGTGAAACTTGGGCGAGATGTGAAGGCATGTGAATACGAGGACGTGCACGTGATGTGGGAGATGTTGAAGAGAAACGAAACAGAT
CAGGTAATTGGACTGTCGGAAAGGCGCCGAAAAAGGAGATCGTTATGGAATATATTTTGGTGGGCTCGATCGGCTCCATGCATTGGCGGAGGATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCTTTTATCTCGTAAATGGAGAATATGGAGTGGTTTTTTGAAACAGAATTCCATGGACCAAGAAATTAGAGTGGACCAAACCATCGCATATTTCTACTTT
GCAGACCAAGTGTTTGATAAAATGTCTCACTACAGTAATCCACTCTTCCAAGCTTTCTATTATGCCCATCGCGCCATGTGTTGTTGGGAGGTGTCACGACATGAA
CAAAACTCTCACCGCTTACTTGCCACATGTGCTCACTTCATAGGGCGAAAAGCAGAGGATGAGACAACTTTGAGTGTTTCGTTTTCCAACTTCCATAATAATCGC
TTTGGCCGTACAGTGTTTTTCCACTTTTATTCGTGCTATCATCACTGGCTCCCATTTTATCCGACGGCGAAGAAACTCCTATATATATGCAAAGAGTTCTGCTCT
GGGGCGACCTGGTTGATTCTGAATTTGGAACCCTTCCTTGGGAAATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAACCTGGAGAAACAAA
AGTCCTCCAGAGATGCCAAATATGATAACTGAGATGATTATTACTGTAACCGCTTTCGTGTTTCTTTCTTCCTTGAAGTCAGCTGGAAACAAACAAGAAAGCCAT
GACAATACAGGTCCCAAGTGGATCTTCATAAATCAACGCAACGGTCGCATTGGAATCGGTGAAAGGCGGATCTGGAGAATGAGATTGGGCGGAAAGCGGTTAATA
TTTCGAATTACGTTCCGCTGTGAATTTTATGTTCCTTCAGATTTGAGAGATCTTAGCGTCTCTTCTCTCTTTAAACTCTTCTCTCACTGGAGTAGAAGCAGAGAA
TTCGAGAATGGAATGGTGGAGGAAGATGACTTCTCCGTTGCGAAGTTTTACCTTCAGAGTCGCCGCTCGTCTCGGATTTCGCAAACGCGAATATATGCTATACGG
ATTCTCAATTCCAAGCGGCTAGTGAAACTTGGGCGAGATGTGAAGGCATGTGAATACGAGGACGTGCACGTGATGTGGGAGATGTTGAAGAGAAACGAAACAGAT
CAGGTAATTGGACTGTCGGAAAGGCGCCGAAAAAGGAGATCGTTATGGAATATATTTTGGTGGGCTCGATCGGCTCCATGCATTGGCGGAGGATTCTGA
Protein sequenceShow/hide protein sequence
MILLSRKWRIWSGFLKQNSMDQEIRVDQTIAYFYFADQVFDKMSHYSNPLFQAFYYAHRAMCCWEVSRHEQNSHRLLATCAHFIGRKAEDETTLSVSFSNFHNNR
FGRTVFFHFYSCYHHWLPFYPTAKKLLYICKEFCSGATWLILNLEPFLGKWAEAMARRLKWLGRETWRNKSPPEMPNMITEMIITVTAFVFLSSLKSAGNKQESH
DNTGPKWIFINQRNGRIGIGERRIWRMRLGGKRLIFRITFRCEFYVPSDLRDLSVSSLFKLFSHWSRSREFENGMVEEDDFSVAKFYLQSRRSSRISQTRIYAIR
ILNSKRLVKLGRDVKACEYEDVHVMWEMLKRNETDQVIGLSERRRKRRSLWNIFWWARSAPCIGGGF