CuGenDBv2

Gene ID	CaUC05G100470
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ATP synthase subunit d, mitochondrial
Genome location	Ciama_Chr05:31347261..31349759
RNA-Seq Expression	CaUC05G100470
Synteny	CaUC05G100470
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0000274 - mitochondrial proton-transporting ATP synthase, stator stalk (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR008689 - ATP synthase, F0 complex, subunit D, mitochondrial IPR036228 - ATP synthase, F0 complex, subunit D superfamily, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022139222.1 ATP synthase subunit d, mitochondrial [Momordica charantia]

4.0e-84

96.43

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+VEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022945159.1 ATP synthase subunit d, mitochondrial [Cucurbita moschata]

2.0e-83

96.43

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022966719.1 ATP synthase subunit d, mitochondrial [Cucurbita maxima]

6.8e-84

97.02

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_023541261.1 ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]

3.0e-84

97.62

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_038893313.1 ATP synthase subunit d, mitochondrial [Benincasa hispida]

8.8e-84

97.02

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGT+KKV +VAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE+KSLKESERLEKEIVEVQEMKKKISTMTADEYF KHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

TrEMBL top hits

e value

%identity

Alignment

A0A5D3CDC0 ATP synthase subunit d, mitochondrial

2.1e-83

96.43

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEEKSLKESERLEKEI EV+EMK+KI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1CDD8 ATP synthase subunit d, mitochondrial

1.9e-84

96.43

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+VEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1G072 ATP synthase subunit d, mitochondrial

9.5e-84

96.43

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1HUL8 ATP synthase subunit d, mitochondrial

3.3e-84

97.02

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

E5GCK9 ATP synthase subunit d, mitochondrial

2.1e-83

96.43

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEEKSLKESERLEKEI EV+EMK+KI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

SwissProt top hits

e value

%identity

Alignment

Q9FT52 ATP synthase subunit d, mitochondrial

5.4e-76

83.33

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIEIPK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE+KSLKESERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

Arabidopsis top hits

e value

%identity

Alignment

AT3G52300.1 ATP synthase D chain, mitochondrial

3.8e-77

83.33

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIEIPK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE+KSLKESERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

AT3G52300.2 ATP synthase D chain, mitochondrial

3.2e-47

79.63

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIEIPK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLV
        PKFDAL++
Subjt:  PKFDALLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGCGGCACCGTTAAGAAAGTGGCCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTT
CTCGTCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAACCCTCCAGACTAAATTTAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCC
GCTTGGTGGACATGTACAAAGAGGCTTATGACAGCATTGAGATCCCCAAATTCGTAGACACAGTGACTCCACAGTACAAACCTAAATTTGATGCATTGCTGGTAGAATTG
AAGGAGGCCGAAGAAAAGTCTCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACTGCTGATGAATACTT
TGAGAAGCATCCTGAGCTGAGGAAGAAATTCGATGATGAAATCCGAAACGACTACTGGGGCTATTGA

mRNA sequence

Show/hide mRNA sequence

CAAAAAGCAGTAGAACAATAGACGCCGATATCTCTGTTTTGAGCTCTCAACGAATTGCCCTCTCACACATCCCATTGATTCTCTTCTTCTTTCCTCCGCCAAATCGAGAG
ATAACAACAAGAAAATGAGCGGCACCGTTAAGAAAGTGGCCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAG
GCTCGCAAGGAGTTCTCGTCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAACCCTCCAGACTAAATTTAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAA
GGGAATTGGATCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACAGCATTGAGATCCCCAAATTCGTAGACACAGTGACTCCACAGTACAAACCTAAATTTGATGCAT
TGCTGGTAGAATTGAAGGAGGCCGAAGAAAAGTCTCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACT
GCTGATGAATACTTTGAGAAGCATCCTGAGCTGAGGAAGAAATTCGATGATGAAATCCGAAACGACTACTGGGGCTATTGACTGGAAATTAAAGTTGAAGCACCAAAGTT
TCAGAATTTAATTTCATAAACCTCCCGGGACTTGTTTTGCTGCAGATGTTTGGTCAGTAATAAAACAAACCAGATAGTTCCTCTGAAATTTGGTTGCATTTGCTTTCGGG
ATTATGGTGACGAAATTGATTAGGGAAACTGAGTTTTTCCTTGAAATGATGTTGTGAGAGTTCCAAATAACTCTTAAGGTTACATTATCATGGAAAATGCATTTTTTTTT
AATGAGCTTATTCTGGCTTTCTTATCCTTCCAAGATCAATAAAGAGATGTTACAAGCTTTAAATTCA

Protein sequence

Show/hide protein sequence

MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYKPKFDALLVEL
KEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

CaUC05G100470 (gene) of Watermelon (USVL246-FR2) v1 genome