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CaUC06G108010 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G108010
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr06:1711881..1714387
RNA-Seq ExpressionCaUC06G108010
SyntenyCaUC06G108010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT05584.1 Os08g0434566 [Oryza sativa Japonica Group]2.6e-0560Show/hide
Query:  LTELPASLNKSNLRVVCEKWNGTPKKIRLWLEIGIENSDVIAKFN
        LT+ PASLNK +LRVV E+WNG  ++IRL LE+GIE+ +V+A F+
Subjt:  LTELPASLNKSNLRVVCEKWNGTPKKIRLWLEIGIENSDVIAKFN
KAB8108638.1 hypothetical protein EE612_044294 [Oryza sativa]2.6e-0560Show/hide
Query:  LTELPASLNKSNLRVVCEKWNGTPKKIRLWLEIGIENSDVIAKFN
        LT+ PASLNK +LRVV E+WNG  ++IRL LE+GIE+ +V+A F+
Subjt:  LTELPASLNKSNLRVVCEKWNGTPKKIRLWLEIGIENSDVIAKFN
TrEMBL top hitse value%identityAlignment
A0A0P0XGK1 Os08g0434566 protein1.2e-0560Show/hide
Query:  LTELPASLNKSNLRVVCEKWNGTPKKIRLWLEIGIENSDVIAKFN
        LT+ PASLNK +LRVV E+WNG  ++IRL LE+GIE+ +V+A F+
Subjt:  LTELPASLNKSNLRVVCEKWNGTPKKIRLWLEIGIENSDVIAKFN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAAGCATTTTTTCTCTGATTTGTGTATTATATCTAATATACTTTATATTCCAAACGAAGGCACTCGATCTCAGCATTTTTTCTCTGATTTGTGTATTATA
TCTAATATACTTTATATTCCAAACGAAGGCACTCGATCTCAGGGCTTTCTTCACCAACTTCAGCTTTCTTCTCCTTCAACCGAGCTTACCGAACTTCCAGCGAGC
TTGAACAAGAGCAATCTCAGGGTTGTTTGTGAGAAATGGAATGGTACGCCAAAGAAAATCAGGCTCTGGTTGGAAATCGGCATCGAAAATAGCGACGTAATCGCA
AAGTTTAACAAATTATGTTTTTTAGTTCAAGATTTTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTAAGCATTTTTTCTCTGATTTGTGTATTATATCTAATATACTTTATATTCCAAACGAAGGCACTCGATCTCAGCATTTTTTCTCTGATTTGTGTATTATA
TCTAATATACTTTATATTCCAAACGAAGGCACTCGATCTCAGGGCTTTCTTCACCAACTTCAGCTTTCTTCTCCTTCAACCGAGCTTACCGAACTTCCAGCGAGC
TTGAACAAGAGCAATCTCAGGGTTGTTTGTGAGAAATGGAATGGTACGCCAAAGAAAATCAGGCTCTGGTTGGAAATCGGCATCGAAAATAGCGACGTAATCGCA
AAGTTTAACAAATTATGTTTTTTAGTTCAAGATTTTAGTTAA
Protein sequenceShow/hide protein sequence
MIKHFFSDLCIISNILYIPNEGTRSQHFFSDLCIISNILYIPNEGTRSQGFLHQLQLSSPSTELTELPASLNKSNLRVVCEKWNGTPKKIRLWLEIGIENSDVIA
KFNKLCFLVQDFS