; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC06G108100 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G108100
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description10 kDa chaperonin-like
Genome locationCiama_Chr06:1747467..1753446
RNA-Seq ExpressionCaUC06G108100
SyntenyCaUC06G108100
Gene Ontology termsGO:0051085 - chaperone cofactor-dependent protein refolding (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR011032 - GroES-like superfamily
IPR020818 - GroES chaperonin family
IPR037124 - GroES chaperonin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574824.1 10 kDa chaperonin 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.8e-6295.49Show/hide
Query:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
        MASMFLTVKP+VNKID PT SN+RIQSTRRTSLKVCAVSKKLE  KVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
Subjt:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

XP_004145027.1 10 kDa chaperonin 1, chloroplastic [Cucumis sativus]6.4e-6193.23Show/hide
Query:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
        MASMFLTVKPFVNK + PTFSNQR+ STRR SLKVCAV KKLEP KVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG+LGQGK
Subjt:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

XP_022958987.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata]4.4e-6296.24Show/hide
Query:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
        MASMFLTVKPFVNKID  T SN+RIQSTRRTSLKVCAVSKKLEP KVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
Subjt:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

XP_023006781.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita maxima]5.2e-6396.99Show/hide
Query:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
        MASMFLTVKPFVNKID PT SN+RIQSTRRTSLKVCAVSKKLEP KVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
Subjt:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

XP_038906447.1 10 kDa chaperonin 1, chloroplastic-like [Benincasa hispida]5.2e-6396.24Show/hide
Query:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
        MASMFLTVKPFVNKIDAPTFSNQR+ STRRTSLKVCAV+KKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILS GADAGELG+GK
Subjt:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

TrEMBL top hitse value%identityAlignment
A0A0A0KET7 Uncharacterized protein3.1e-6193.23Show/hide
Query:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
        MASMFLTVKPFVNK + PTFSNQR+ STRR SLKVCAV KKLEP KVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG+LGQGK
Subjt:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

A0A1S4E2Q1 10 kDa chaperonin-like3.1e-6193.23Show/hide
Query:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
        MASMFLTVKPFVNK + PTFSNQR+ STRR SLKVCAV KKLEP KVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG+LGQGK
Subjt:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

A0A5D3DLT2 Chloroplast chaperonin3.1e-6193.23Show/hide
Query:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
        MASMFLTVKPFVNK + PTFSNQR+ STRR SLKVCAV KKLEP KVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG+LGQGK
Subjt:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

A0A6J1H3B8 10 kDa chaperonin 1, chloroplastic-like2.1e-6296.24Show/hide
Query:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
        MASMFLTVKPFVNKID  T SN+RIQSTRRTSLKVCAVSKKLEP KVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
Subjt:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

A0A6J1KWR7 10 kDa chaperonin 1, chloroplastic-like2.5e-6396.99Show/hide
Query:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
        MASMFLTVKPFVNKID PT SN+RIQSTRRTSLKVCAVSKKLEP KVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK
Subjt:  MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

SwissProt top hitse value%identityAlignment
A5GNB0 10 kDa chaperonin7.7e-0938Show/hide
Query:  LEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV
        L  + V P GDRV +++ E  EK+AGG+LLP +A   E+  +GE++  G           A E+G G KVL+S  +  ++ LG+D ++V     D+LAVV
Subjt:  LEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV

O80504 10 kDa chaperonin 2, chloroplastic4.2e-3961.15Show/hide
Query:  MASMFLTVKP-----FVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG-
        MAS F+   P     F  K   P+ +N  +  +RR  L++ A+S K EPTKVVPQ DRVL+RLE+LP KS+GGVLLPK+AVKFERYL GEI+S G++ G 
Subjt:  MASMFLTVKP-----FVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG-

Query:  ELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        ++G GK+VLFSD+SAYEVDLGTDA+H FCK SDLLA+VE
Subjt:  ELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

Q0I7U2 10 kDa chaperonin7.7e-0938Show/hide
Query:  LEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV
        L  + V P GDRV +++ E  EK+AGG+LLP +A   E+  +GE++  G           A E+G G KVL+S  +  ++ LG+D ++V     D+LAVV
Subjt:  LEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV

Q7TV92 10 kDa chaperonin1.0e-0839Show/hide
Query:  LEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV
        L  + V P GDRV I++ E  EK+AGG+LLP +A   E+  +GE+   G           A E+G G KVL+S  +  ++ LG+D ++V     D+LAVV
Subjt:  LEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV

Q9M1C2 10 kDa chaperonin 1, chloroplastic1.2e-4165.94Show/hide
Query:  MASMFLTV-KPFVN---KIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGEL
        MAS F+TV KPF++   K +APT   Q +   RR S ++ AVS K EP KVVPQ DRVL+RLE LPEKS+GGVLLPKSAVKFERYL GE++S G++ GE+
Subjt:  MASMFLTV-KPFVN---KIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGEL

Query:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLLAVVE
          GKKVLFSD+SAYEVD GT DAKH FCK SDLLA+V+
Subjt:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLLAVVE

Arabidopsis top hitse value%identityAlignment
AT2G44650.1 chloroplast chaperonin 103.0e-4061.15Show/hide
Query:  MASMFLTVKP-----FVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG-
        MAS F+   P     F  K   P+ +N  +  +RR  L++ A+S K EPTKVVPQ DRVL+RLE+LP KS+GGVLLPK+AVKFERYL GEI+S G++ G 
Subjt:  MASMFLTVKP-----FVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG-

Query:  ELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        ++G GK+VLFSD+SAYEVDLGTDA+H FCK SDLLA+VE
Subjt:  ELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

AT3G60210.1 GroES-like family protein8.3e-4365.94Show/hide
Query:  MASMFLTV-KPFVN---KIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGEL
        MAS F+TV KPF++   K +APT   Q +   RR S ++ AVS K EP KVVPQ DRVL+RLE LPEKS+GGVLLPKSAVKFERYL GE++S G++ GE+
Subjt:  MASMFLTV-KPFVN---KIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGEL

Query:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLLAVVE
          GKKVLFSD+SAYEVD GT DAKH FCK SDLLA+V+
Subjt:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLLAVVE

AT5G20720.1 chaperonin 201.9e-0730.61Show/hide
Query:  TKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        T + P GDRVL++++E  EK+ GG+LLP +A    +   GE+++ G +   +G+         G ++++S  +  EV+   D KH+  K  D++ ++E
Subjt:  TKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

AT5G20720.2 chaperonin 201.9e-0730.61Show/hide
Query:  TKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        T + P GDRVL++++E  EK+ GG+LLP +A    +   GE+++ G +   +G+         G ++++S  +  EV+   D KH+  K  D++ ++E
Subjt:  TKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

AT5G20720.3 chaperonin 201.9e-0730.61Show/hide
Query:  TKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        T + P GDRVL++++E  EK+ GG+LLP +A    +   GE+++ G +   +G+         G ++++S  +  EV+   D KH+  K  D++ ++E
Subjt:  TKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTATGTTCTTGACTGTGAAGCCCTTTGTAAACAAAATTGACGCACCCACTTTCTCCAATCAGAGAATACAGAGCACTCGGAGAACTTCCCTTAAAGTCTGTGC
AGTGTCGAAGAAATTGGAACCCACCAAGGTTGTTCCACAAGGGGATAGAGTCCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTTCTACTTCCCAAGT
CAGCCGTTAAATTCGAGCGTTATCTGTTAGGAGAGATCCTCTCTACAGGTGCTGATGCCGGTGAACTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGACATTAGTGCTTAT
GAGGTGGATTTAGGCACAGATGCAAAACATGTCTTCTGCAAAGCAAGTGATTTACTGGCTGTAGTTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ACAAGCCACAATTTGGCCGGTTATTGTGTCAAAAGTTGGCAACTCGACACCGCAATCTGGAGCGAAGATTTCAGTGAAGTTGTCGGAGGATGGATTGCAATTTACAGTGT
TGTTACTAGTACAGTTTCCTTTGCAGAAGTTCACGAATTGCAACGCCATGCACCCAAGACCTGCACTGTCACTCAGCATACTCCAAAGCTCTTGCCTTGGCCGTTTAGCT
CACTACCTTATCCATGGCGTCTATGTTCTTGACTGTGAAGCCCTTTGTAAACAAAATTGACGCACCCACTTTCTCCAATCAGAGAATACAGAGCACTCGGAGAACTTCCC
TTAAAGTCTGTGCAGTGTCGAAGAAATTGGAACCCACCAAGGTTGTTCCACAAGGGGATAGAGTCCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTT
CTACTTCCCAAGTCAGCCGTTAAATTCGAGCGTTATCTGTTAGGAGAGATCCTCTCTACAGGTGCTGATGCCGGTGAACTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGA
CATTAGTGCTTATGAGGTGGATTTAGGCACAGATGCAAAACATGTCTTCTGCAAAGCAAGTGATTTACTGGCTGTAGTTGAGTAAGTTTCAGGAAGGGGAAAAAAAAAAA
AAGCCACAACTCTGGTTGTATTAGGTTCCTTCTTTTTTGTAAGGCAGAGGGATTTTTCATTGTTGTAGCTACAAATGTAGTTGAATATGTTATATTGAAGTCTCTGACTC
AGTTCTTTGGATTAATATTTCACTCTGTGCCATTTCTGCTACGCTCTCTTCTCCAACATTCTTGAGAACTCGGAAACTGATGGAAGTCATGAGAGAGAGACCATTGGAAG
ATGTTAGTATAGGTCTAATTGTTTCAATTTCCATTCTTGTCACTGTTGAATTAAAAGAAGAAAAATTAGTTGACCTAAAATCAATATTTAAACAACTGCTAATTTGGTTT
ACGTATATGATTCTCAGTTTGCAAAATGGATCCAAGATGGGGAGGGG
Protein sequenceShow/hide protein sequence
MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGKKVLFSDISAY
EVDLGTDAKHVFCKASDLLAVVE