; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC06G110620 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G110620
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionMannan endo-1,4-beta-mannosidase
Genome locationCiama_Chr06:4897038..4900374
RNA-Seq ExpressionCaUC06G110620
SyntenyCaUC06G110620
Gene Ontology termsGO:0071704 - organic substance metabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domainsIPR035992 - Ricin B-like lectins


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055143.1 endoglucanase-like [Cucumis melo var. makuwa]6.5e-5679.71Show/hide
Query:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM
        L Q    DPSSNLTTSFIMYH LSG CVRMNKKYQLG+SS KTSN WSHE+DGAPI+LAGSILCLK +G GLPPILS+DCSSQQS WKY SNAKLQLAT+
Subjt:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM

Query:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ
        DEQGQALCLQ+A HSHQI+T+KC+  NDS CQE PQSQ
Subjt:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ

KAE8648503.1 hypothetical protein Csa_009407 [Cucumis sativus]3.5e-5781.16Show/hide
Query:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM
        L Q    DPSSNLTTSFIMYH LSGECV++NKKYQLGVSS KTSN WSHE+DG PI+L GSILCL+ VGDGLPPILSKDCSSQQSAWKYASNAKLQLAT+
Subjt:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM

Query:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ
        DE+GQALCLQ+A HSHQILT+KC+ PNDS CQ  PQSQ
Subjt:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ

KAE8648505.1 hypothetical protein Csa_007897 [Cucumis sativus]4.1e-5882.61Show/hide
Query:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM
        L Q    DPSSNLTTSFIMYH LSGECVRMNKKYQLGVSS KTSN WSHE+DG PI+L GSILCL+ VGDGLPPILSKDCSSQQSAWKYASNAKLQLAT+
Subjt:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM

Query:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ
        DE+GQALCLQ+A HSHQILT+KC+ PNDS CQ  PQSQ
Subjt:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ

XP_008459280.1 PREDICTED: uncharacterized protein LOC103498458 [Cucumis melo]3.2e-5581.06Show/hide
Query:  TDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATMDEQGQA
        TDPSSN TTSFIMYH LSG C+RMNKKYQLG+SS KTSN WSHE+DGAPI+LAGSILCLK +G GLPPILS+DCSSQQS WKY SNAKLQLAT+DEQGQA
Subjt:  TDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATMDEQGQA

Query:  LCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ
        LCLQ+A HSHQI+T+KC+  NDS CQE PQSQ
Subjt:  LCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ

XP_031739082.1 glycosyl hydrolase 5 family protein [Cucumis sativus]4.1e-5883.33Show/hide
Query:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM
        L Q    DPSSNLTTSFIMYH LSGECVRMNKKYQLGVSS KTSN WSHE+D  PI+LAGSILCL+ VGDGLPPILSKDCSSQQSAWKYASNAKLQLAT+
Subjt:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM

Query:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ
        DEQGQALCLQ+A HSHQILT+KC+ PNDS CQ  PQSQ
Subjt:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ

TrEMBL top hitse value%identityAlignment
A0A0A0L6S7 Mannan endo-1,4-beta-mannosidase1.9e-5684.73Show/hide
Query:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM
        L Q    DPSSNLTTSFIMYH LSGECVRMNKKYQLGVSS KTSN WSHE+D  PI+LAGSILCL+ VGDGLPPILSKDCSSQQSAWKYASNAKLQLAT+
Subjt:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM

Query:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPC
        DEQGQALCLQ+A HSHQILT+KCI PNDS C
Subjt:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPC

A0A1S3C9U1 Mannan endo-1,4-beta-mannosidase1.6e-5581.06Show/hide
Query:  TDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATMDEQGQA
        TDPSSN TTSFIMYH LSG C+RMNKKYQLG+SS KTSN WSHE+DGAPI+LAGSILCLK +G GLPPILS+DCSSQQS WKY SNAKLQLAT+DEQGQA
Subjt:  TDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATMDEQGQA

Query:  LCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ
        LCLQ+A HSHQI+T+KC+  NDS CQE PQSQ
Subjt:  LCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ

A0A5A7TI19 Mannan endo-1,4-beta-mannosidase2.0e-5578.26Show/hide
Query:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM
        L Q    DPSSN TTSFIMYH LSG C+RMNKKYQLG+SS KTSN WSHE+DGAPI+LAGSILCLK +G GLPPILS+DCSSQQS WKY SNAKLQLAT+
Subjt:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM

Query:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ
        DEQGQALCLQ+A HSHQI+T+KC+  NDS CQE PQSQ
Subjt:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ

A0A5A7UE15 Mannan endo-1,4-beta-mannosidase2.7e-5578.99Show/hide
Query:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM
        L Q    DPSSNLTTSFIMYH LSG CVRMNKKYQLG+SS KTSN WSHE+DGAPI+LAGSILCLK +G GLP ILS+DCSSQQS WKY SNAKLQLAT+
Subjt:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM

Query:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ
        DEQGQALCLQ+A HSHQI+T+KC+  NDS CQE PQSQ
Subjt:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ

A0A5A7UGS0 Mannan endo-1,4-beta-mannosidase3.2e-5679.71Show/hide
Query:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM
        L Q    DPSSNLTTSFIMYH LSG CVRMNKKYQLG+SS KTSN WSHE+DGAPI+LAGSILCLK +G GLPPILS+DCSSQQS WKY SNAKLQLAT+
Subjt:  LQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATM

Query:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ
        DEQGQALCLQ+A HSHQI+T+KC+  NDS CQE PQSQ
Subjt:  DEQGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ

SwissProt top hitse value%identityAlignment
C0HLA0 Glycosyl hydrolase 5 family protein9.0e-0834.43Show/hide
Query:  IMYHFLSGECVR--MNKKYQLGVSSGKTSNHWSHEED-GAPIQLAGSILCLKVVGDGLPPILSKDCSS-QQSAWKYASNAKLQLAT----MDEQGQALCL
        I+YH  SG CV   +     LG S     + W+++     PI L GS  C+   G+GLP I++++CS+   + W   S+A+LQL T     D + + +CL
Subjt:  IMYHFLSGECVR--MNKKYQLGVSSGKTSNHWSHEED-GAPIQLAGSILCLKVVGDGLPPILSKDCSS-QQSAWKYASNAKLQLAT----MDEQGQALCL

Query:  QKAFHSHQILTDKCIRPNDSPC
          +  S  I T++CI   DS C
Subjt:  QKAFHSHQILTDKCIRPNDSPC

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCTCTTCAACAAAGATCCAACACAGATCCAAGCTCAAATCTCACAACATCATTCATAATGTATCATTTTCTTAGTGGCGAATGTGTGAGAATGAACAAA
AAGTATCAATTAGGAGTCAGTAGCGGTAAAACCTCTAATCATTGGAGCCATGAAGAAGATGGTGCTCCAATTCAGTTGGCAGGATCTATATTGTGCTTGAAAGTT
GTTGGAGATGGGCTCCCTCCAATTCTCTCTAAAGATTGCTCGAGCCAACAAAGTGCTTGGAAATATGCTTCAAATGCCAAGCTTCAACTAGCCACCATGGATGAA
CAAGGACAAGCCTTGTGCTTGCAAAAGGCTTTTCATTCCCATCAAATTTTGACTGACAAGTGCATACGTCCAAATGATTCTCCGTGCCAAGAAGTTCCACAAAGC
CAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCTCTTCAACAAAGATCCAACACAGATCCAAGCTCAAATCTCACAACATCATTCATAATGTATCATTTTCTTAGTGGCGAATGTGTGAGAATGAACAAA
AAGTATCAATTAGGAGTCAGTAGCGGTAAAACCTCTAATCATTGGAGCCATGAAGAAGATGGTGCTCCAATTCAGTTGGCAGGATCTATATTGTGCTTGAAAGTT
GTTGGAGATGGGCTCCCTCCAATTCTCTCTAAAGATTGCTCGAGCCAACAAAGTGCTTGGAAATATGCTTCAAATGCCAAGCTTCAACTAGCCACCATGGATGAA
CAAGGACAAGCCTTGTGCTTGCAAAAGGCTTTTCATTCCCATCAAATTTTGACTGACAAGTGCATACGTCCAAATGATTCTCCGTGCCAAGAAGTTCCACAAAGC
CAATGATTAATTAAGTTATTTTTCCAAAGATCCTTTCTATTTCGTAATATTGCTGATGAAGCCGACGTTAAAGTCACATACAAGCGGTTCTCGTTAGTCACCTCC
AGCCGTCATACGCCCTTTCGCTTCGTAGCAGAACTCCATATTTTGCCCCATTTTTTCGCCCACTATTCTATTGGTATCCATCGGAATATCAATTCAAGCATTTCT
CTCCCACTTTTCCATACATTTATTCGGAACGCTAGAAATTATTATTCTCAATTGACCATCCTTATGGAACCACAAGTCATGGCCCTTAAATTTCGTAATTTCAGT
TAG
Protein sequenceShow/hide protein sequence
MVALQQRSNTDPSSNLTTSFIMYHFLSGECVRMNKKYQLGVSSGKTSNHWSHEEDGAPIQLAGSILCLKVVGDGLPPILSKDCSSQQSAWKYASNAKLQLATMDE
QGQALCLQKAFHSHQILTDKCIRPNDSPCQEVPQSQ