; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC06G110690 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G110690
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptiontRNA pseudouridine synthase
Genome locationCiama_Chr06:4996564..4999137
RNA-Seq ExpressionCaUC06G110690
SyntenyCaUC06G110690
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0034196 - acylglycerol transport (biological process)
GO:1990052 - ER to chloroplast lipid transport (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0070300 - phosphatidic acid binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsIPR001406 - Pseudouridine synthase I, TruA
IPR020095 - Pseudouridine synthase I, TruA, C-terminal
IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138518.2 uncharacterized protein LOC101205797 [Cucumis sativus]7.5e-11385Show/hide
Query:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN
        QVAHF+TPFNYDSLESVHAALNGLLPVDIRVRE+SPAVPDFHARFSTLSKVYHYKIY+  I+DPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTN
Subjt:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP
        AAHNDRVVNPVK I RFDVIEMG LVQ+EVEGSGFLYRQVRNM                   VGLLVQIGKEA+PP+VVPKILASRDRRELAKYASGVPP
Subjt:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP

Query:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY
        QGLCLVS+NYKEDHLKLPSDCPGTS GR+RSVSKCK+PFY
Subjt:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY

XP_008458279.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X1 [Cucumis melo]6.4e-11284.17Show/hide
Query:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN
        QVAHF+TPFNYDSLESVHAALNGLLPVDIRVRE+SPA PDFHARFSTLSKVYHYKIYN  I+DPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTN
Subjt:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP
        AAHN+RVVNPVK I RFDVIEMG LVQ+EVEGSGFLYRQVRNM                   VGLLVQIGKEA+PP+VVPKILASRDR+ELAKYASGVPP
Subjt:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP

Query:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY
        QGLCLVS+NYKEDHLKLPSDCPGTS GRSRSV KCK+PFY
Subjt:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY

XP_008458280.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X2 [Cucumis melo]2.6e-12170.09Show/hide
Query:  MWRIPLISQSPLSPASNGDCSSLMTVPDTQVNSNSLWLKLLRLVVVACWMSFSSSLVQAEQIKEFMPGVRSDVLL--WSRVKK-THHWNTMLAVAYNKLR
        M RIPLISQSPLSPASNG CSSLMTV D Q +  +          + C +    +L+ A +++      R D+ L   SR  K  H W            
Subjt:  MWRIPLISQSPLSPASNGDCSSLMTVPDTQVNSNSLWLKLLRLVVVACWMSFSSSLVQAEQIKEFMPGVRSDVLL--WSRVKK-THHWNTMLAVAYNKLR

Query:  FQVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFT
         QVAHF+TPFNYDSLESVHAALNGLLPVDIRVRE+SPA PDFHARFSTLSKVYHYKIYN  I+DPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAFT
Subjt:  FQVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFT

Query:  NAAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVP
        NAAHN+RVVNPVK I RFDVIEMG LVQ+EVEGSGFLYRQVRNM                   VGLLVQIGKEA+PP+VVPKILASRDR+ELAKYASGVP
Subjt:  NAAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVP

Query:  PQGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY
        PQGLCLVS+NYKEDHLKLPSDCPGTS GRSRSV KCK+PFY
Subjt:  PQGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY

XP_038875516.1 tRNA pseudouridine synthase A 1 isoform X1 [Benincasa hispida]2.8e-11587.5Show/hide
Query:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN
        QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPA PDFHARFSTLSKVYHYKIYN AILDPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTN
Subjt:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP
        AAHNDRVVNPVK I RFDVI+MGPLVQ+EVEGSGFLYRQVRNM                   VGLLVQIGKEAIPPDVVPKILAS+DRRELAKYASGVPP
Subjt:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP

Query:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY
        QGLCLVS+NYKEDHLKLPSDCPGTS GR+RSVSKCKLPFY
Subjt:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY

XP_038875517.1 tRNA pseudouridine synthase A 1 isoform X2 [Benincasa hispida]3.9e-10984.58Show/hide
Query:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN
        QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPA PDFHARFSTLSKVYHYKIYN AILDPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTN
Subjt:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP
        AAHNDRVVNPVK          GPLVQ+EVEGSGFLYRQVRNM                   VGLLVQIGKEAIPPDVVPKILAS+DRRELAKYASGVPP
Subjt:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP

Query:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY
        QGLCLVS+NYKEDHLKLPSDCPGTS GR+RSVSKCKLPFY
Subjt:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY

TrEMBL top hitse value%identityAlignment
A0A1S3C7H4 tRNA pseudouridine synthase1.2e-12170.09Show/hide
Query:  MWRIPLISQSPLSPASNGDCSSLMTVPDTQVNSNSLWLKLLRLVVVACWMSFSSSLVQAEQIKEFMPGVRSDVLL--WSRVKK-THHWNTMLAVAYNKLR
        M RIPLISQSPLSPASNG CSSLMTV D Q +  +          + C +    +L+ A +++      R D+ L   SR  K  H W            
Subjt:  MWRIPLISQSPLSPASNGDCSSLMTVPDTQVNSNSLWLKLLRLVVVACWMSFSSSLVQAEQIKEFMPGVRSDVLL--WSRVKK-THHWNTMLAVAYNKLR

Query:  FQVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFT
         QVAHF+TPFNYDSLESVHAALNGLLPVDIRVRE+SPA PDFHARFSTLSKVYHYKIYN  I+DPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAFT
Subjt:  FQVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFT

Query:  NAAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVP
        NAAHN+RVVNPVK I RFDVIEMG LVQ+EVEGSGFLYRQVRNM                   VGLLVQIGKEA+PP+VVPKILASRDR+ELAKYASGVP
Subjt:  NAAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVP

Query:  PQGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY
        PQGLCLVS+NYKEDHLKLPSDCPGTS GRSRSV KCK+PFY
Subjt:  PQGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY

A0A1S3C7L6 tRNA pseudouridine synthase3.1e-11284.17Show/hide
Query:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN
        QVAHF+TPFNYDSLESVHAALNGLLPVDIRVRE+SPA PDFHARFSTLSKVYHYKIYN  I+DPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTN
Subjt:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP
        AAHN+RVVNPVK I RFDVIEMG LVQ+EVEGSGFLYRQVRNM                   VGLLVQIGKEA+PP+VVPKILASRDR+ELAKYASGVPP
Subjt:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP

Query:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY
        QGLCLVS+NYKEDHLKLPSDCPGTS GRSRSV KCK+PFY
Subjt:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY

A0A6J1H621 tRNA pseudouridine synthase2.7e-10880.83Show/hide
Query:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN
        QVAHFITPFNYDSL+ +HAALNGLLP DIRVRE+SPAVPDFHARFSTLSKVYHYKIYN AILDPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAF N
Subjt:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP
         AHNDRVVNPVK I RFDVIEMG L+Q+EVEGSGFLYRQVRNM                   V LL+QIGKEAIPPD+VPKILA+RDR+ELAKY + +PP
Subjt:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP

Query:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY
        QGLCLV +NYKEDHLKLPSDCPGTS GRS SVSKCKLPFY
Subjt:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY

A0A6J1L0L1 tRNA pseudouridine synthase2.7e-10881.67Show/hide
Query:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN
        QVAHFITPFNYDSL+ +HAALNGLLP DIRVREISPAVPDFHARFSTLSKVYHYKIYN AILDPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAF N
Subjt:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP
         AHNDRVVNPVK I RFDVIEMG L+Q+EVEGSGFLYRQVRNM                   V LL+QIGKEAIPPDVVPKILASRDR+ LAKY + +PP
Subjt:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP

Query:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY
        QGLCLV +NYKEDHLKLPSDCPGTS GRS SVSKCKLPFY
Subjt:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY

A0A6J1L2M8 tRNA pseudouridine synthase2.7e-10881.67Show/hide
Query:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN
        QVAHFITPFNYDSL+ +HAALNGLLP DIRVREISPAVPDFHARFSTLSKVYHYKIYN AILDPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAF N
Subjt:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP
         AHNDRVVNPVK I RFDVIEMG L+Q+EVEGSGFLYRQVRNM                   V LL+QIGKEAIPPDVVPKILASRDR+ LAKY + +PP
Subjt:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPP

Query:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY
        QGLCLV +NYKEDHLKLPSDCPGTS GRS SVSKCKLPFY
Subjt:  QGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY

SwissProt top hitse value%identityAlignment
A4J151 tRNA pseudouridine synthase A1.3e-2737.76Show/hide
Query:  ESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRVVNPVKDI
        E    ALN LLP DI+V +      DFHARFS ++K Y Y IY+  ++ PF R Y YH   +L+  AM+E A Y +G +DF +F   A    V + ++ I
Subjt:  ESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRVVNPVKDI

Query:  LRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPPQGLCLVSVNY
         R D+IE  P++ + + G+GFLY  VR +T                   G L+ IG   I P+ + KI+ S++R      A   PPQGLCL+ V Y
Subjt:  LRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPPQGLCLVSVNY

B1I1B5 tRNA pseudouridine synthase A2.2e-3037.74Show/hide
Query:  RFQVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAF
        R QV +F+T       E + AALNG+LP DI   +      DFHAR+S ++K Y Y +YN  +  PFQR Y+ H    L+  AMR AA + +G+HDFS F
Subjt:  RFQVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAF

Query:  TNAAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGV
          A     V + V+ + R D+    PLV++     GFLY  VR M                    G L+++G E + P+ +P I+AS DR   A+    V
Subjt:  TNAAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGV

Query:  PPQGLCLVSVNY
        PP GLCL  V Y
Subjt:  PPQGLCLVSVNY

Q3A3B5 tRNA pseudouridine synthase A2.1e-2534.67Show/hide
Query:  RFQVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAF
        R  VAHF+TP     + +    +N  LP  I VR+ +    DFHAR+S + K Y Y IY S +  P    +++H    L+  AMR+AA   VG+HDF+AF
Subjt:  RFQVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAF

Query:  TNAAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGV
          +    R    V+++   D+++    V ++V GSGFL   VR M                   VG LV++G+ A PP+ V  +LA   R++     SG+
Subjt:  TNAAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGV

Query:  --PPQGLCLVSVNYKEDHLKLPSDC
          P QGLCL+ V Y       P DC
Subjt:  --PPQGLCLVSVNYKEDHLKLPSDC

Q6MEE7 tRNA pseudouridine synthase A 14.0e-3234.88Show/hide
Query:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN
        QVAHF    +Y  L  +H +LNGLLP DIR++ + P  P FH+++S + K YHY ++ + ++DPFQR Y++H   K++   +++AA  F G HDF++F N
Subjt:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN

Query:  AAHNDRVV-NPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVP
         AH      NPV+ + R D+      +++E EG GFLY+ VRN+                   VG L+ +       + + +I A+++RR+ +  A   P
Subjt:  AAHNDRVV-NPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVP

Query:  PQGLCLVSVNYKEDH
        P+GL L+ V Y+ ++
Subjt:  PQGLCLVSVNYKEDH

Q8R7Y7 tRNA pseudouridine synthase A7.2e-2638.86Show/hide
Query:  FQVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFT
        +QVA+F T       E +  ALN +LP D+ V +       FHAR+S  SK Y Y I N     P  R Y +H  Y L+  AM++AA +F G HDFSAF 
Subjt:  FQVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFT

Query:  NAAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVP
          A  ++ VNPVK I    V + G L++IEVE  GFLY  VR +                   VG LV +G   I    +P I+ S+DR    K     P
Subjt:  NAAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYASGVP

Query:  PQGLCLVSVNY
        PQGL LV + Y
Subjt:  PQGLCLVSVNY

Arabidopsis top hitse value%identityAlignment
AT1G34150.1 Pseudouridine synthase family protein1.2e-0728.95Show/hide
Query:  LNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRVVNPVKDILRFDVI
        LN  LP DIRV   SPA  DFHARFS  ++ Y Y  +                   LN +AM  A   F+G+HDF  F        V N      R    
Subjt:  LNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRVVNPVKDILRFDVI

Query:  EMGP---------LVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKY--ASGVP
        E+ P         L    + GS FL+ Q+R M                   V +L  IG+     DV+  +L ++      +Y  AS +P
Subjt:  EMGP---------LVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKY--ASGVP

AT3G06950.1 Pseudouridine synthase family protein1.7e-8665.98Show/hide
Query:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN
        QVAHF+TPFNY SL+S HAALNGLLP DIRVRE+S AVP+FHARFS  SKVY Y+IYN   +DPFQR + YHC YKLN + MREAAN FVGKHDFSAF N
Subjt:  QVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHYKIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYAS-GVP
        A   D V +P+K I RFDVI+MG L+Q+EVEGSGFLYRQVRNM                   V LL+QIGKEA+  D+VP IL ++DRR LAKY S    
Subjt:  AAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVGLLVQIGKEAIPPDVVPKILASRDRRELAKYAS-GVP

Query:  PQGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY
        P GLCLVSV YKEDHLKLP DCP TSSGR  +++KCKLPFY
Subjt:  PQGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAGGGATGAGGTGCTGGGCGGTGGGTTCGCCTGTTCTTCCTCCCATTTCCCTTCCCCTTTCACCAAGCATTCCATTTCCCAATGGCGCTTCATCTTCCTCCAGTCGTG
GATTCCCGGTAACAACAATACTTCCCTAATCTCTCAGTTCCTCTTTTCATATTGGTGCTTTAATTTTGACGATGTTGATGAGGTCGTTGCCTTAATGTGGAGGATTCCTC
TTATATCACAGAGTCCCCTTTCCCCAGCTTCAAATGGCGATTGCTCATCGCTTATGACGGTACCCGATACGCAGGTTAACAGTAATTCTTTATGGCTTAAGCTTTTGAGG
TTAGTTGTTGTTGCATGCTGGATGTCTTTTTCATCATCATTGGTGCAAGCAGAACAGATAAAGGAGTTCATGCCTGGGGTCAGGTCTGATGTGCTTTTATGGAGTCGGGT
TAAAAAAACACATCATTGGAATACAATGCTTGCTGTTGCTTACAACAAGTTGAGGTTTCAGGTGGCTCACTTTATTACGCCATTTAACTACGATAGCTTGGAAAGCGTTC
ATGCTGCACTGAATGGTCTTCTTCCTGTGGATATAAGAGTTCGAGAGATCAGTCCCGCTGTGCCTGACTTTCATGCTCGGTTTTCTACATTAAGCAAGGTTTATCACTAC
AAGATATATAATAGTGCCATCTTGGATCCATTTCAGCGTTGCTACACTTACCATTGTGTTTATAAACTCAACTATGCAGCCATGAGAGAAGCTGCAAATTATTTCGTTGG
GAAGCATGATTTTTCTGCTTTTACAAATGCAGCACATAATGATCGAGTGGTAAATCCAGTGAAGGACATTTTGCGTTTTGATGTCATAGAAATGGGACCTCTTGTGCAGA
TAGAAGTTGAGGGTTCTGGGTTCTTATATAGACAAGTTCGGAATATGACTTCCTGGAAGCAGAGATATAAGTTTGTAAAATCGGTTTCATGCAACTCAGGAACTGTTGGC
TTGTTGGTTCAAATTGGAAAGGAAGCAATTCCTCCTGATGTTGTTCCTAAGATTTTGGCTTCTCGAGATCGCAGAGAGCTTGCGAAGTATGCTTCAGGTGTTCCTCCACA
GGGGCTCTGTCTTGTGAGTGTTAATTATAAAGAGGACCATTTAAAGCTTCCATCTGATTGCCCTGGGACTAGTTCTGGTAGGAGTCGCAGTGTGAGCAAATGTAAACTCC
CTTTTTATTGA
mRNA sequenceShow/hide mRNA sequence
AAGAGGGATGAGGTGCTGGGCGGTGGGTTCGCCTGTTCTTCCTCCCATTTCCCTTCCCCTTTCACCAAGCATTCCATTTCCCAATGGCGCTTCATCTTCCTCCAGTCGTG
GATTCCCGGTAACAACAATACTTCCCTAATCTCTCAGTTCCTCTTTTCATATTGGTGCTTTAATTTTGACGATGTTGATGAGGTCGTTGCCTTAATGTGGAGGATTCCTC
TTATATCACAGAGTCCCCTTTCCCCAGCTTCAAATGGCGATTGCTCATCGCTTATGACGGTACCCGATACGCAGGTTAACAGTAATTCTTTATGGCTTAAGCTTTTGAGG
TTAGTTGTTGTTGCATGCTGGATGTCTTTTTCATCATCATTGGTGCAAGCAGAACAGATAAAGGAGTTCATGCCTGGGGTCAGGTCTGATGTGCTTTTATGGAGTCGGGT
TAAAAAAACACATCATTGGAATACAATGCTTGCTGTTGCTTACAACAAGTTGAGGTTTCAGGTGGCTCACTTTATTACGCCATTTAACTACGATAGCTTGGAAAGCGTTC
ATGCTGCACTGAATGGTCTTCTTCCTGTGGATATAAGAGTTCGAGAGATCAGTCCCGCTGTGCCTGACTTTCATGCTCGGTTTTCTACATTAAGCAAGGTTTATCACTAC
AAGATATATAATAGTGCCATCTTGGATCCATTTCAGCGTTGCTACACTTACCATTGTGTTTATAAACTCAACTATGCAGCCATGAGAGAAGCTGCAAATTATTTCGTTGG
GAAGCATGATTTTTCTGCTTTTACAAATGCAGCACATAATGATCGAGTGGTAAATCCAGTGAAGGACATTTTGCGTTTTGATGTCATAGAAATGGGACCTCTTGTGCAGA
TAGAAGTTGAGGGTTCTGGGTTCTTATATAGACAAGTTCGGAATATGACTTCCTGGAAGCAGAGATATAAGTTTGTAAAATCGGTTTCATGCAACTCAGGAACTGTTGGC
TTGTTGGTTCAAATTGGAAAGGAAGCAATTCCTCCTGATGTTGTTCCTAAGATTTTGGCTTCTCGAGATCGCAGAGAGCTTGCGAAGTATGCTTCAGGTGTTCCTCCACA
GGGGCTCTGTCTTGTGAGTGTTAATTATAAAGAGGACCATTTAAAGCTTCCATCTGATTGCCCTGGGACTAGTTCTGGTAGGAGTCGCAGTGTGAGCAAATGTAAACTCC
CTTTTTATTGA
Protein sequenceShow/hide protein sequence
KRDEVLGGGFACSSSHFPSPFTKHSISQWRFIFLQSWIPGNNNTSLISQFLFSYWCFNFDDVDEVVALMWRIPLISQSPLSPASNGDCSSLMTVPDTQVNSNSLWLKLLR
LVVVACWMSFSSSLVQAEQIKEFMPGVRSDVLLWSRVKKTHHWNTMLAVAYNKLRFQVAHFITPFNYDSLESVHAALNGLLPVDIRVREISPAVPDFHARFSTLSKVYHY
KIYNSAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRVVNPVKDILRFDVIEMGPLVQIEVEGSGFLYRQVRNMTSWKQRYKFVKSVSCNSGTVG
LLVQIGKEAIPPDVVPKILASRDRRELAKYASGVPPQGLCLVSVNYKEDHLKLPSDCPGTSSGRSRSVSKCKLPFY