; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC06G110940 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G110940
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description30S ribosomal protein S6
Genome locationCiama_Chr06:5291220..5294155
RNA-Seq ExpressionCaUC06G110940
SyntenyCaUC06G110940
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR000529 - Ribosomal protein S6
IPR014717 - Translation elongation factor EF1B/ribosomal protein S6
IPR020814 - Ribosomal protein S6, plastid/chloroplast
IPR020815 - Ribosomal protein S6, conserved site
IPR035980 - Ribosomal protein S6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575140.1 hypothetical protein SDJN03_25779, partial [Cucurbita argyrosperma subsp. sororia]2.5e-12880.88Show/hide
Query:  MDTLLFSPSSSSSAYHSLKAHNLFLRRN--GSRS-FSDFPNLCSSFCTLNPPTGFPRKSAILAAKK--TNKDDGHRSVPKPDESTGFFPEAVLLKESEKF
        MDTLLFSPS SSSAY SLKA  L  R    GSRS FSDFPN+CSSF TLN PTGF RKS ++AAKK  +NKDDGHRSVPKPDE+TGFFPEAVLLKE    
Subjt:  MDTLLFSPSSSSSAYHSLKAHNLFLRRN--GSRS-FSDFPNLCSSFCTLNPPTGFPRKSAILAAKK--TNKDDGHRSVPKPDESTGFFPEAVLLKESEKF

Query:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK
                  K+VAEDGQFLPEFADAEEEKLYEYLNLQLESE+KV QMRHYEVVFLIHEKNAEEVESVNEKVQGF+REKKGKIWRLSDWGMRRLAYKIKK
Subjt:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK

Query:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVD-DDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGII
        A YAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAG D  ++ EE+DMDDYDSEDE+DWDG+DELDDYGD+ EDGII
Subjt:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVD-DDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGII

Query:  IVDSDNDDDDNKIKSLEVL
        IVD D+DDDD+  K   +L
Subjt:  IVDSDNDDDDNKIKSLEVL

TYK02967.1 putative dual specificity protein phosphatase [Cucumis melo var. makuwa]1.1e-12883.44Show/hide
Query:  MDTL-LFSPSSSSSAY-----HSLKAH-NLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT----NKDDGHRSVPKPDESTGFFPEAVLL
        MD L LFSPSSSSS++      SLK+H NLFL RNGSRSFSDFPN+CSSF TLN PT F RKS ILAAKKT    NKDDGHRS+PKPDES GFFPEAVLL
Subjt:  MDTL-LFSPSSSSSAY-----HSLKAH-NLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT----NKDDGHRSVPKPDESTGFFPEAVLL

Query:  KESEKFLEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRL
        KE              KKVAEDGQFLPEFADAEEEKLYEYLNLQLESE+KV+QMRHYEVVFLIHEKNAEEVESV EKVQGFLREKKGK+WRLSDWGMRRL
Subjt:  KESEKFLEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRL

Query:  AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGV-DDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDE
        AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRD AITEDCPPPPEFHTLRAGV DDDD+EEDDMDDY+S DEMDWD EDELDDY D 
Subjt:  AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGV-DDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDE

Query:  FEDGIIIVDSDNDD
        F+DGIIIVDSDNDD
Subjt:  FEDGIIIVDSDNDD

XP_008458328.1 PREDICTED: probable dual specificity protein phosphatase DDB_G0281963 [Cucumis melo]1.9e-12881.93Show/hide
Query:  MDTL-LFSPSSSSSAY-----HSLKAH-NLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT----NKDDGHRSVPKPDESTGFFPEAVLL
        MD L LFSPSSSSS++      SLK+H NLFL RNGSRSFSDFPN+CSSF TLN PT F RKS ILAAKKT    NKDDGHRS+PKPDES GFFPEAVLL
Subjt:  MDTL-LFSPSSSSSAY-----HSLKAH-NLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT----NKDDGHRSVPKPDESTGFFPEAVLL

Query:  KESEKFLEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRL
        KE              KKVAEDGQFLPEFADAEEEKLYEYLNLQLESE+KV+QMRHYEVVFLIHEKNAEEVESV EKVQGFLREKKGK+WRLSDWGMRRL
Subjt:  KESEKFLEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRL

Query:  AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGV-DDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDE
        AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRD AITEDCPPPPEFHTLRAGV DDDD+EEDDMDDY+S DEMDWD EDELDDY D 
Subjt:  AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGV-DDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDE

Query:  FEDGIIIVDSDNDDDDNKIKS
        F+DGIIIVDSDNDD      S
Subjt:  FEDGIIIVDSDNDDDDNKIKS

XP_023548157.1 coiled-coil domain-containing protein 1 [Cucurbita pepo subsp. pepo]3.9e-12982.96Show/hide
Query:  MDTLLFSPSSSSSAYHSLKAHNLFLRRN--GSRS-FSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT--NKDDGHRSVPKPDESTGFFPEAVLLKESEKF
        MDTLLFSP SSSSAY SLKA +L  R    GSR+ FSDFPN+CSSFCTLNPPTGF RKS ++AAKKT  NKDDGHRSVPKPDE+TGFFPEAVLLKE    
Subjt:  MDTLLFSPSSSSSAYHSLKAHNLFLRRN--GSRS-FSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT--NKDDGHRSVPKPDESTGFFPEAVLLKESEKF

Query:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK
                  K+VAEDGQFLPEFADAEEEKLYEYLNLQLESE+KV QMRHYEVVFLIHEKNAEEVESVNEKVQGF+REKKGKIWRLSDWGMRRLAYKIKK
Subjt:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK

Query:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVD-DDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGII
        A YAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFH+LRAG D  ++ EE+DMDDYDSEDE+DWDGEDELDDYGD+ EDGII
Subjt:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVD-DDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGII

Query:  IVDSDNDDDDN
        IVD D+DDDD+
Subjt:  IVDSDNDDDDN

XP_038906527.1 uncharacterized protein LOC120092503 [Benincasa hispida]1.7e-13283.8Show/hide
Query:  MDTLLFSP------SSSSSAYHSLKAHNLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKTN----KDDGHRSVPKPDESTGFFPEAVLLK
        MDTLLFSP      SSSSS Y SLKA+ L LRRNGSRSFSDFPN+CSSF TL+ PTGFPRKSAILA KKTN    KDDGHRS+PKPDESTGFFPEAVLLK
Subjt:  MDTLLFSP------SSSSSAYHSLKAHNLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKTN----KDDGHRSVPKPDESTGFFPEAVLLK

Query:  ESEKFLEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLA
        E              KKVAEDGQFLPEFADAEEEKLYEYLNLQLESE+KV+QMRHYEVVFLIHEKNAEEVESV  KVQGFLREKKGKIWRLSDWGMRRLA
Subjt:  ESEKFLEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLA

Query:  YKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVDDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFE
        YKIKKAKYAHYILMNFELEAKWINEFKSMLDMDER+IRHLVIKRDAAITEDCPPPPEFHTLRAGVDD DSE+DDM DYDS DEM WDGEDELDD GD+ E
Subjt:  YKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVDDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFE

Query:  DGIIIVDSDND--DDDNKIKS
        DGIIIVDSDND  DDDN  KS
Subjt:  DGIIIVDSDND--DDDNKIKS

TrEMBL top hitse value%identityAlignment
A0A1S3C7Q7 probable dual specificity protein phosphatase DDB_G02819639.3e-12981.93Show/hide
Query:  MDTL-LFSPSSSSSAY-----HSLKAH-NLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT----NKDDGHRSVPKPDESTGFFPEAVLL
        MD L LFSPSSSSS++      SLK+H NLFL RNGSRSFSDFPN+CSSF TLN PT F RKS ILAAKKT    NKDDGHRS+PKPDES GFFPEAVLL
Subjt:  MDTL-LFSPSSSSSAY-----HSLKAH-NLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT----NKDDGHRSVPKPDESTGFFPEAVLL

Query:  KESEKFLEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRL
        KE              KKVAEDGQFLPEFADAEEEKLYEYLNLQLESE+KV+QMRHYEVVFLIHEKNAEEVESV EKVQGFLREKKGK+WRLSDWGMRRL
Subjt:  KESEKFLEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRL

Query:  AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGV-DDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDE
        AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRD AITEDCPPPPEFHTLRAGV DDDD+EEDDMDDY+S DEMDWD EDELDDY D 
Subjt:  AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGV-DDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDE

Query:  FEDGIIIVDSDNDDDDNKIKS
        F+DGIIIVDSDNDD      S
Subjt:  FEDGIIIVDSDNDDDDNKIKS

A0A5D3BU03 Putative dual specificity protein phosphatase5.5e-12983.44Show/hide
Query:  MDTL-LFSPSSSSSAY-----HSLKAH-NLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT----NKDDGHRSVPKPDESTGFFPEAVLL
        MD L LFSPSSSSS++      SLK+H NLFL RNGSRSFSDFPN+CSSF TLN PT F RKS ILAAKKT    NKDDGHRS+PKPDES GFFPEAVLL
Subjt:  MDTL-LFSPSSSSSAY-----HSLKAH-NLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT----NKDDGHRSVPKPDESTGFFPEAVLL

Query:  KESEKFLEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRL
        KE              KKVAEDGQFLPEFADAEEEKLYEYLNLQLESE+KV+QMRHYEVVFLIHEKNAEEVESV EKVQGFLREKKGK+WRLSDWGMRRL
Subjt:  KESEKFLEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRL

Query:  AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGV-DDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDE
        AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRD AITEDCPPPPEFHTLRAGV DDDD+EEDDMDDY+S DEMDWD EDELDDY D 
Subjt:  AYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGV-DDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDE

Query:  FEDGIIIVDSDNDD
        F+DGIIIVDSDNDD
Subjt:  FEDGIIIVDSDNDD

A0A6J1H5G0 putative vacuolar protein sorting-associated protein 13F2.7e-12881.07Show/hide
Query:  MDTLLFSPSSSSSAYHSLKAHNLFLRRN--GSR-SFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT--NKDDGHRSVPKPDESTGFFPEAVLLKESEKF
        MDTLLFSPS SSSAY SLKA  L  R    GSR  FSDFPN+CSSF TLN PTGF RKS ++AAKKT  NKDDGHRSVPKPDE+TGFFPEAVLLKE    
Subjt:  MDTLLFSPSSSSSAYHSLKAHNLFLRRN--GSR-SFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKT--NKDDGHRSVPKPDESTGFFPEAVLLKESEKF

Query:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK
                  K+VAEDGQFLPEFADAEEEKLYEYLNLQLESE+KV QMRHYEVVFLIHEKNAEEVESVNEKV GF+REKKGKIWRLSDWGMRRLAYKIKK
Subjt:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK

Query:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVD-DDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGII
        A YAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAG D  ++ EE+DMDDYDSEDE+DWDGEDELDDYGD+ EDGII
Subjt:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVD-DDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGII

Query:  IVDSDNDDDDNKIKSLE
        IVD D+DDDD+  K+++
Subjt:  IVDSDNDDDDNKIKSLE

A0A6J1KWC1 uncharacterized protein LOC111499293 isoform X14.3e-12681.9Show/hide
Query:  MDTLLFSPSSSSSAYHSLKAHNLFLRRN--GSRS-FSDFPNLCSSFCTLNPPTGFPRKSAILAAKK--TNKDDGHRSVPKPDESTGFFPEAVLLKESEKF
        MDTLLFSP SSSSAY SLKA  L  R    GSRS FSDFPN+CSSF TLN PTGF RKSAI+AAKK  TNKDD HRSVPKPDE+TGFFPEAVLLKE    
Subjt:  MDTLLFSPSSSSSAYHSLKAHNLFLRRN--GSRS-FSDFPNLCSSFCTLNPPTGFPRKSAILAAKK--TNKDDGHRSVPKPDESTGFFPEAVLLKESEKF

Query:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK
                  K+VAEDGQFLPEFADAEEEKLYEYLNLQLESE+KV QMRHYEVVFLIHEKNAEEVESVNEKVQGF+REKKGKIWRLSDWGMRRLAYKIKK
Subjt:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK

Query:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVD-DDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGII
        A YAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAG D  ++ EE+DMDDYDSED +DWDGEDELDDYGD+ EDGII
Subjt:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVD-DDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGII

Query:  IVDSDNDDDDNKIKS
        IVD D+D     IKS
Subjt:  IVDSDNDDDDNKIKS

A0A6J1L5G1 uncharacterized protein LOC111499293 isoform X24.3e-12681.9Show/hide
Query:  MDTLLFSPSSSSSAYHSLKAHNLFLRRN--GSRS-FSDFPNLCSSFCTLNPPTGFPRKSAILAAKK--TNKDDGHRSVPKPDESTGFFPEAVLLKESEKF
        MDTLLFSP SSSSAY SLKA  L  R    GSRS FSDFPN+CSSF TLN PTGF RKSAI+AAKK  TNKDD HRSVPKPDE+TGFFPEAVLLKE    
Subjt:  MDTLLFSPSSSSSAYHSLKAHNLFLRRN--GSRS-FSDFPNLCSSFCTLNPPTGFPRKSAILAAKK--TNKDDGHRSVPKPDESTGFFPEAVLLKESEKF

Query:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK
                  K+VAEDGQFLPEFADAEEEKLYEYLNLQLESE+KV QMRHYEVVFLIHEKNAEEVESVNEKVQGF+REKKGKIWRLSDWGMRRLAYKIKK
Subjt:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK

Query:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVD-DDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGII
        A YAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAG D  ++ EE+DMDDYDSED +DWDGEDELDDYGD+ EDGII
Subjt:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVD-DDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGII

Query:  IVDSDNDDDDNKIKS
        IVD D+D     IKS
Subjt:  IVDSDNDDDDNKIKS

SwissProt top hitse value%identityAlignment
A6VD48 30S ribosomal protein S68.7e-1538.13Show/hide
Query:  MRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDC
        MRHYE+VFL+H   +E+V  + E+    + E  GKI RL DWG R+LAY I     AHY+LMN E  AK + E +     ++ VIR+LV++RD A+TE  
Subjt:  MRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDC

Query:  PPPPEFHTLRAGVDDDDSEEDDMDDYDSEDEMDWDGEDE
               +     +  +   D+ +  D +D  D D  DE
Subjt:  PPPPEFHTLRAGVDDDDSEEDDMDDYDSEDEMDWDGEDE

B8GNS2 30S ribosomal protein S66.0e-1640.14Show/hide
Query:  MRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDC
        MRHYE+VF++H   +E+V ++ E+ +G +    GKI RL DWG R+LAY I K   AHY+LMN E     + E  S    ++ VIRH+V+  + A TE  
Subjt:  MRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDC

Query:  PPPPEFHTLRAGVDDDDSEEDDMDDYDSEDEMDWDGEDELDD
        P       L  G ++DDS   D     + D+ D DG+D+ DD
Subjt:  PPPPEFHTLRAGVDDDDSEEDDMDDYDSEDEMDWDGEDELDD

Q0VMF9 30S ribosomal protein S64.4e-1945.54Show/hide
Query:  MRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDC
        MRHYEVVFL+H   +E+V ++ E+    + + KG I R+ DWG R+LAY I K   AHY+++N E + + + E ++    ++ VIRHLVI+RD AITE  
Subjt:  MRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDC

Query:  P
        P
Subjt:  P

Q2SLB5 30S ribosomal protein S63.5e-1638.03Show/hide
Query:  MRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDC
        MRHYE+V ++H   +E+V ++ E+    +    GK+ RL DWG R +AY I K   AHY+LMN E   + I+E       ++ ++R LVI+R  A+TE  
Subjt:  MRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDC

Query:  P-----------PPPEFHTLRAGVDDDDSEEDDMDDYDSEDE
        P           P  E    R   DD D  +DD DD DS DE
Subjt:  P-----------PPPEFHTLRAGVDDDDSEEDDMDDYDSEDE

Q82XQ6 30S ribosomal protein S68.4e-1838.66Show/hide
Query:  MRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDC
        MRHYE+VF++H   +E+V ++ E+    +  + GKI RL DWG R+L Y I+K   AHY+LMN E + + +NE +     ++ ++RHLVI+ +  IT   
Subjt:  MRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDC

Query:  PPPPEFHTLRAGVDDDDSE
        P   E  +      D+DSE
Subjt:  PPPPEFHTLRAGVDDDDSE

Arabidopsis top hitse value%identityAlignment
AT3G17170.1 Translation elongation factor EF1B/ribosomal protein S6 family protein6.7e-7152.13Show/hide
Query:  MDTLLFSPSSSSSAYHSLKAHNLFLRRNGSRSFSDFPNLCSSFCTLNPPTG--FPRKSAILAA---KKTNKDDGHRSVPKPDESTGFFPEAVLLKESEKF
        M++LL + SS  S         L  R +G  SF +   +C     LNP  G    +   ++AA   KK+ KDD H    +PDE+TG FPE++LLKE    
Subjt:  MDTLLFSPSSSSSAYHSLKAHNLFLRRNGSRSFSDFPNLCSSFCTLNPPTG--FPRKSAILAA---KKTNKDDGHRSVPKPDESTGFFPEAVLLKESEKF

Query:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK
                  KK+ E+G  LPEFADAEE++LY++L+LQL+S+   ++MRHYEVV+LIHEK+AEEVES+N+KVQ +L+EKKGK+WR SDWGMRRLAYKI+K
Subjt:  LEWTFGSNWQKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKK

Query:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAG---VDDDDSE--EDDMDDYDSEDEMDWDG-EDELDD-----
        A+ AHYILMNFE+EAK++NEFK +LD DERVIRHLV+KRD AITEDCPPPPEFH++RAG    DDD+ E  E+D D+ + EDE D D  E E+DD     
Subjt:  AKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAG---VDDDDSE--EDDMDDYDSEDEMDWDG-EDELDD-----

Query:  ---YGDEFEDGIIIVDSDNDDDDNKIKS
           YGDE E+G    D  ++ ++ + KS
Subjt:  ---YGDEFEDGIIIVDSDNDDDDNKIKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACGCTTCTCTTCTCCCCTTCTTCTTCTTCTTCAGCTTATCATTCTCTGAAGGCTCACAATCTGTTTCTTCGTCGAAATGGCTCACGCTCTTTCTCTGATTTTCC
GAATCTTTGCTCTTCGTTTTGCACTCTCAATCCACCAACTGGATTCCCAAGAAAATCCGCCATTCTCGCAGCAAAGAAGACCAACAAGGACGACGGTCACCGCTCCGTAC
CCAAGCCTGACGAGTCCACCGGCTTCTTCCCTGAAGCTGTTCTGCTAAAGGAGTCTGAGAAATTTCTTGAGTGGACTTTTGGTTCTAATTGGCAGAAAAAGGTTGCAGAA
GATGGTCAATTTCTTCCCGAATTTGCTGATGCGGAAGAAGAAAAGCTTTATGAATATTTGAACCTTCAGTTGGAAAGTGAAACGAAAGTTGATCAAATGCGTCACTACGA
GGTAGTCTTCCTAATTCACGAGAAGAATGCAGAAGAGGTTGAGAGTGTAAATGAGAAAGTTCAAGGTTTTCTAAGGGAGAAGAAAGGGAAGATATGGAGACTGAGTGACT
GGGGAATGCGAAGATTGGCATACAAGATAAAGAAAGCCAAGTATGCACATTACATATTGATGAATTTTGAACTGGAGGCCAAATGGATCAATGAATTTAAGAGCATGTTA
GATATGGATGAAAGAGTAATTCGACATCTCGTGATTAAGAGGGATGCTGCTATCACCGAAGATTGCCCTCCCCCTCCTGAGTTTCACACGCTTCGTGCAGGAGTAGATGA
TGATGACAGTGAAGAAGATGACATGGATGATTATGATAGTGAGGATGAAATGGATTGGGATGGTGAGGATGAGTTGGATGATTATGGTGATGAGTTTGAAGATGGGATCA
TCATTGTTGACAGTGACAACGATGATGATGACAACAAAATTAAAAGCTTGGAGGTTTTAGGGCATGTCAACGAACCATGTGACGATTTTGAAGTCGTTTTCATCACCAAC
GTTTCTCCACAGGAGCCAAGAGTTAGACTGATGATTGATCTTATGGATGACACACTAGCCATTGTAGTGACAAAATATGGATGGAAGTAA
mRNA sequenceShow/hide mRNA sequence
TTCTGTTTCTGGTTCTGCCATTTCCGTACTTCGGATAAAGAGTCCATAAACCTCTATTCTCAACGTCGAAATTTCGCACCATGGATACGCTTCTCTTCTCCCCTTCTTCT
TCTTCTTCAGCTTATCATTCTCTGAAGGCTCACAATCTGTTTCTTCGTCGAAATGGCTCACGCTCTTTCTCTGATTTTCCGAATCTTTGCTCTTCGTTTTGCACTCTCAA
TCCACCAACTGGATTCCCAAGAAAATCCGCCATTCTCGCAGCAAAGAAGACCAACAAGGACGACGGTCACCGCTCCGTACCCAAGCCTGACGAGTCCACCGGCTTCTTCC
CTGAAGCTGTTCTGCTAAAGGAGTCTGAGAAATTTCTTGAGTGGACTTTTGGTTCTAATTGGCAGAAAAAGGTTGCAGAAGATGGTCAATTTCTTCCCGAATTTGCTGAT
GCGGAAGAAGAAAAGCTTTATGAATATTTGAACCTTCAGTTGGAAAGTGAAACGAAAGTTGATCAAATGCGTCACTACGAGGTAGTCTTCCTAATTCACGAGAAGAATGC
AGAAGAGGTTGAGAGTGTAAATGAGAAAGTTCAAGGTTTTCTAAGGGAGAAGAAAGGGAAGATATGGAGACTGAGTGACTGGGGAATGCGAAGATTGGCATACAAGATAA
AGAAAGCCAAGTATGCACATTACATATTGATGAATTTTGAACTGGAGGCCAAATGGATCAATGAATTTAAGAGCATGTTAGATATGGATGAAAGAGTAATTCGACATCTC
GTGATTAAGAGGGATGCTGCTATCACCGAAGATTGCCCTCCCCCTCCTGAGTTTCACACGCTTCGTGCAGGAGTAGATGATGATGACAGTGAAGAAGATGACATGGATGA
TTATGATAGTGAGGATGAAATGGATTGGGATGGTGAGGATGAGTTGGATGATTATGGTGATGAGTTTGAAGATGGGATCATCATTGTTGACAGTGACAACGATGATGATG
ACAACAAAATTAAAAGCTTGGAGGTTTTAGGGCATGTCAACGAACCATGTGACGATTTTGAAGTCGTTTTCATCACCAACGTTTCTCCACAGGAGCCAAGAGTTAGACTG
ATGATTGATCTTATGGATGACACACTAGCCATTGTAGTGACAAAATATGGATGGAAGTAA
Protein sequenceShow/hide protein sequence
MDTLLFSPSSSSSAYHSLKAHNLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKTNKDDGHRSVPKPDESTGFFPEAVLLKESEKFLEWTFGSNWQKKVAE
DGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGKIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSML
DMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVDDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGIIIVDSDNDDDDNKIKSLEVLGHVNEPCDDFEVVFITN
VSPQEPRVRLMIDLMDDTLAIVVTKYGWK