; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC06G111480 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G111480
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRibosomal protein L19e family protein isoform 1
Genome locationCiama_Chr06:5890989..5891597
RNA-Seq ExpressionCaUC06G111480
SyntenyCaUC06G111480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458406.1 PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo]4.7e-9292.57Show/hide
Query:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCISATDSITDQIP SS A +L+LSAALFPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS
        GRE+DGFGGGDFDGPYGGD  GGGGGGGRGWNFD+FGGNDWDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEA GNSERGKLSMR IS
Subjt:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS

Query:  VC
        VC
Subjt:  VC

XP_011657286.1 uncharacterized protein LOC105435841 [Cucumis sativus]4.3e-9393.07Show/hide
Query:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPSS A AL+LSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS
        GRE+DGFGGGDFDGP GGD  GGG GGGRGWNFD+FGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKL+MR IS
Subjt:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS

Query:  VC
        VC
Subjt:  VC

XP_022138602.1 uncharacterized protein LOC111009719 [Momordica charantia]9.9e-9089.6Show/hide
Query:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSM ANNG+GFAKFLNRLDFVSNYC+SA+DSIT+QIPPSSAAGALQLSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS
        G E+DGFGG +FDG Y    GGGGGG GRGWNFD+FGGNDWDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+AIGNSERGKLSMR IS
Subjt:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS

Query:  VC
        VC
Subjt:  VC

XP_023548774.1 uncharacterized protein LOC111807330 [Cucurbita pepo subsp. pepo]3.0e-8687.68Show/hide
Query:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDS
        MD+SLVAGTLSMVANNG+GFAKFLNRLD +SNY ISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKS+S RS+SRTFLRRKRRTKRRLY SDDS
Subjt:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDS

Query:  EGRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFI
        EG E++GF GGDFDGPYGGD   GGGGGGRGWNFD+FGG+DWDESSSSS+S NPAYYFVYEV+CWIALSNCVHFAFKKVVRFAAEAIGNSER KL  R I
Subjt:  EGRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFI

Query:  SVC
        SVC
Subjt:  SVC

XP_038874866.1 uncharacterized protein LOC120067363 [Benincasa hispida]4.3e-9392.08Show/hide
Query:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDS+TDQI PSSAAGALQLSAALFP+ATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS DSE
Subjt:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS
        GRE+DGF GGDFDGPYGGD   G  GGGRGWNFD+FGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA EA+GNSERGK+SMR IS
Subjt:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS

Query:  VC
        VC
Subjt:  VC

TrEMBL top hitse value%identityAlignment
A0A0A0KG90 Uncharacterized protein2.1e-9393.07Show/hide
Query:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPSS A AL+LSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS
        GRE+DGFGGGDFDGP GGD  GGG GGGRGWNFD+FGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKL+MR IS
Subjt:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS

Query:  VC
        VC
Subjt:  VC

A0A1S3C7S8 uncharacterized protein LOC1034978282.3e-9292.57Show/hide
Query:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCISATDSITDQIP SS A +L+LSAALFPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS
        GRE+DGFGGGDFDGPYGGD  GGGGGGGRGWNFD+FGGNDWDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEA GNSERGKLSMR IS
Subjt:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS

Query:  VC
        VC
Subjt:  VC

A0A6J1CBL0 uncharacterized protein LOC1110097194.8e-9089.6Show/hide
Query:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSM ANNG+GFAKFLNRLDFVSNYC+SA+DSIT+QIPPSSAAGALQLSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS
        G E+DGFGG +FDG Y    GGGGGG GRGWNFD+FGGNDWDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+AIGNSERGKLSMR IS
Subjt:  GRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFIS

Query:  VC
        VC
Subjt:  VC

A0A6J1H560 uncharacterized protein LOC1114602366.1e-8586.7Show/hide
Query:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS-DDS
        MD+SLVAGTLSMVANNG+GFAKFLNRLD +SNY  SATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKS+S RS+SR FLRRKRRTKRRLYS DDS
Subjt:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS-DDS

Query:  EGRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFI
        EG E++GF GGDFDGPYGGD   GGGGGGRGWNFD+F G+DWDESSSSS+S NPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSER KL +R I
Subjt:  EGRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFI

Query:  SVC
        SVC
Subjt:  SVC

A0A6J1KZI4 uncharacterized protein LOC1114990055.5e-8687.68Show/hide
Query:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDS
        MD+SLVAGTLS+VANNG+GFAKFLNRLD +SNY ISATDSITDQIPPSSAAGALQLS ALFPVATIAPPPVKS+S RS+SRTFLRRKRRTKRRLY SDDS
Subjt:  MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDS

Query:  EGRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFI
        EG E++GF  GDFDGPYGGD   GGGGGGRGWNFD+FGGNDWDESSSSS+S NPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSER KL MR I
Subjt:  EGRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFI

Query:  SVC
        SVC
Subjt:  SVC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G06780.1 glycine-rich protein7.2e-3046.51Show/hide
Query:  MDSSLVAGTLSM-VANNGIGFAK-FLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDD
        M+ SL+A T+++  A  GI F K  L RLD  ++  IS  DS+ D   P    G +Q SA +FPV  IAPPPV+S SY++  R  +R+KRRT+R  +  D
Subjt:  MDSSLVAGTLSM-VANNGIGFAK-FLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDD

Query:  SEGRENDG-------FGGGDFDGPYGGDGGGGGGGGGRGWNF----DKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIG
         +   + G       FGG   DGP+ G GGGG  GGG+GWN+      FG ++WD  SS SS S+PA  FVYEV+CWIALSNCVHFAFK++VR     + 
Subjt:  SEGRENDG-------FGGGDFDGPYGGDGGGGGGGGGRGWNF----DKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIG

Query:  NSERGKLSMRFISVC
        + ER KL++    VC
Subjt:  NSERGKLSMRFISVC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTCGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGC
CACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCGCCGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCG
TTTCGTACCGATCGGCCTCTCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAGAACGATGGATTCGGTGGCGGC
GATTTTGACGGACCGTATGGTGGAGATGGCGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAAATTTGGGGGAAATGATTGGGATGAATCATCCTCTTC
TTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTG
AAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTCGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGC
CACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCGCCGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCG
TTTCGTACCGATCGGCCTCTCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAGAACGATGGATTCGGTGGCGGC
GATTTTGACGGACCGTATGGTGGAGATGGCGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAAATTTGGGGGAAATGATTGGGATGAATCATCCTCTTC
TTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTG
AAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA
Protein sequenceShow/hide protein sequence
MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGG
DFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFISVC