; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC06G111490 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G111490
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionethylene-responsive transcription factor RAP2-3-like
Genome locationCiama_Chr06:5896939..5898654
RNA-Seq ExpressionCaUC06G111490
SyntenyCaUC06G111490
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647095.1 hypothetical protein Csa_021726 [Cucumis sativus]4.4e-9382.03Show/hide
Query:  LSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA--AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRI
        L+NESLWSHIDP SDLLGLNYS VK+E PKKR+R+TA  AVAVEKT KARKN+YRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRI
Subjt:  LSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA--AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRI

Query:  RGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDSEEQQASQFGGNGEFERVDVDL
        RGEKAKLNFAPAPPS     AAQ Q+P K +CV+PE T  G N TG PPC R D+SCDS+E YYGEELASLRSFLGLDSEEQQAS+ GGNGEFERVD+D+
Subjt:  RGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDSEEQQASQFGGNGEFERVDVDL

Query:  WMMDDMSLNEQKLSQLV
        WMMDDMSLNEQK SQ+V
Subjt:  WMMDDMSLNEQKLSQLV

KGN47418.1 hypothetical protein Csa_023005 [Cucumis sativus]4.7e-10382.55Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA--AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGT
        MCGGAIISDFIE+KRT KL+NESLWSHIDP SDLLGLNYS VK+E PKKR+R+TA  AVAVEKT KARKN+YRGIRQRPWGKWAAEIRDPRKGVRVWLGT
Subjt:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA--AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGT

Query:  FNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDSEEQ
        FNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPS     AAQ Q+P K +CV+PE T  G N TG PPC R D+SCDS+E YYGEELASLRSFLGLDSEEQ
Subjt:  FNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDSEEQ

Query:  QASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV
        QAS+ GGNGEFERVD+D+WMMDDMSLNEQK SQ+V
Subjt:  QASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV

XP_004153075.3 ethylene-responsive transcription factor RAP2-3 [Cucumis sativus]3.6e-10382.2Show/hide
Query:  RMCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA--AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLG
        +MCGGAIISDFIE+KRT KL+NESLWSHIDP SDLLGLNYS VK+E PKKR+R+TA  AVAVEKT KARKN+YRGIRQRPWGKWAAEIRDPRKGVRVWLG
Subjt:  RMCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA--AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLG

Query:  TFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDSEE
        TFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPS     AAQ Q+P K +CV+PE T  G N TG PPC R D+SCDS+E YYGEELASLRSFLGLDSEE
Subjt:  TFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDSEE

Query:  QQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV
        QQAS+ GGNGEFERVD+D+WMMDDMSLNEQK SQ+V
Subjt:  QQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV

XP_008458405.1 PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis melo]2.9e-10583.19Show/hide
Query:  RMCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA----AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVW
        +MCGGAIISDFIE++RT KL+NESLWSHIDP SDLLGLNYS VK+EKPKKRDR+TA    AVAVEKT K RKNLYRGIRQRPWGKWAAEIRDPRKGVRVW
Subjt:  RMCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA----AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVW

Query:  LGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDS
        LGTFNTAEEAARAYDEAAKRIRG KAKLNFAPAPPS    P AQPQ+P KK+CVLPELT GG N T  PPC R D+SCDS+E YYGEELASLRSFLGLD 
Subjt:  LGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDS

Query:  EEQQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV
        EEQQ SQ GGNGEFERVD+DLWMMDDMSLNE+K SQLV
Subjt:  EEQQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV

XP_038876065.1 ethylene-responsive transcription factor RAP2-3-like [Benincasa hispida]8.5e-10583.61Show/hide
Query:  RMCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATAA----VAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVW
        +MCGGAIISDFIE+KRTRKL+NESLWSHIDP SDLL LNYSPVK+E+PKKRDRATAA    VAVEKTPK RKNLYRGIRQRPWGKWAAEIRDP+KGVRVW
Subjt:  RMCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATAA----VAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVW

Query:  LGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDS
        LGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSS PLPAAQ QSP KKRCV+PE TRGG N TGPPP       CDSDEFYYG+ELASLRSFLGLD 
Subjt:  LGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDS

Query:  EEQQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV
        EEQQ  Q  GNGE E VDV  WMMDDMS+NEQK SQLV
Subjt:  EEQQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV

TrEMBL top hitse value%identityAlignment
A0A0A0KD18 AP2/ERF domain-containing protein2.3e-10382.55Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA--AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGT
        MCGGAIISDFIE+KRT KL+NESLWSHIDP SDLLGLNYS VK+E PKKR+R+TA  AVAVEKT KARKN+YRGIRQRPWGKWAAEIRDPRKGVRVWLGT
Subjt:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA--AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGT

Query:  FNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDSEEQ
        FNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPS     AAQ Q+P K +CV+PE T  G N TG PPC R D+SCDS+E YYGEELASLRSFLGLDSEEQ
Subjt:  FNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDSEEQ

Query:  QASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV
        QAS+ GGNGEFERVD+D+WMMDDMSLNEQK SQ+V
Subjt:  QASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV

A0A1S3C7W9 ethylene-responsive transcription factor RAP2-3-like1.4e-10583.19Show/hide
Query:  RMCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA----AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVW
        +MCGGAIISDFIE++RT KL+NESLWSHIDP SDLLGLNYS VK+EKPKKRDR+TA    AVAVEKT K RKNLYRGIRQRPWGKWAAEIRDPRKGVRVW
Subjt:  RMCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATA----AVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVW

Query:  LGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDS
        LGTFNTAEEAARAYDEAAKRIRG KAKLNFAPAPPS    P AQPQ+P KK+CVLPELT GG N T  PPC R D+SCDS+E YYGEELASLRSFLGLD 
Subjt:  LGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLDS

Query:  EEQQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV
        EEQQ SQ GGNGEFERVD+DLWMMDDMSLNE+K SQLV
Subjt:  EEQQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV

A0A6J1CA63 ethylene-responsive transcription factor RAP2-3-like2.3e-8471.14Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDR--ATAAVAVEKTP-KARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLG
        MCGGAIISDFIE+KR+RK SN  LWS IDP SDLLGL++S VKSEKP+KR+R  A AA  +E  P K RKNLYRGIRQRPWGKWAAEIRDP+KGVRVWLG
Subjt:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDR--ATAAVAVEKTP-KARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLG

Query:  TFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELAS----------L
        TF+TAEEAARAYDEAAKRIRGEKAKLNFA         PAAQPQ+PAKKRCVLPELTR G N TGPP   R  NS  +D  YYG+ELAS          L
Subjt:  TFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEELAS----------L

Query:  RSFLGLDSEEQQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV
         SFLGLD E+QQ SQ GG+ EF+RV VDLWMMDD SLN Q+L QLV
Subjt:  RSFLGLDSEEQQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV

A0A6J1ER95 ethylene-responsive transcription factor RAP2-34.4e-7567.66Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATAAVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFN
        MCGG++IS  IE+KR RKL N SLW   D  SDLLGL+Y  +K+E  +K  RATA    EKT KARKN+YRGIRQRPWGKWAAEIRDP+KGVRVWLGTFN
Subjt:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATAAVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFN

Query:  TAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPC-RRVDNSCDSDEFYYGEELASLRSFLGLD-SEEQ
        TAEEAARAYDEAAKRIRGEKAKLNFAP P    PLP +QP  PAKKRCV  ELT    ++T P P   RV+NSC+ D  YYGEELASLRSFL LD  EEQ
Subjt:  TAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPC-RRVDNSCDSDEFYYGEELASLRSFLGLD-SEEQ

Query:  QASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV
        + SQ GG+ EF +  V+LWMMDD SLNE+K  ++V
Subjt:  QASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV

A0A6J1KF31 ethylene-responsive transcription factor RAP2-36.9e-7668.62Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATAAVAV----EKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWL
        MCGGA+IS  IE+KR RKLSN SLW   D  SDLLGL+Y  +K+E P+K+ RATA  A     EKT KARKN+YRGIRQRPWGKWAAEIRDP+KGVRVWL
Subjt:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATAAVAV----EKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWL

Query:  GTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRG-GSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLD-
        GTFNTAEEAARAYDEAAKRIRGEKAKLNFAP P    PLP +QP  PAKKRCV  ELT    S+ +  P   RV+NSC+ D  YYGEELASLRSFL LD 
Subjt:  GTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRG-GSNATGPPPCRRVDNSCDSDEFYYGEELASLRSFLGLD-

Query:  SEEQQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV
         EEQQ SQ GG+ EF +  V+LWMMDD SLNE+K S +V
Subjt:  SEEQQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV

SwissProt top hitse value%identityAlignment
O22259 Ethylene-responsive transcription factor ERF0713.0e-2859.52Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATAAVAVEKTPK-ARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTF
        MCGGAIISDFI             WS  +     LG     V S K +K      +V+ E+  K  RKNLYRGIRQRPWGKWAAEIRDP KGVRVWLGTF
Subjt:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATAAVAVEKTPK-ARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTF

Query:  NTAEEAARAYDEAAKRIRGEKAKLNF
         TA+EAARAYD AA +IRG KAKLNF
Subjt:  NTAEEAARAYDEAAKRIRGEKAKLNF

P42736 Ethylene-responsive transcription factor RAP2-31.1e-4145.56Show/hide
Query:  MCGGAIISDF---IERKRTRKLSNESLWSHID--PCSDLLGLNYSPVKSEKPKKRDRATAAVAVEKTP-----KARKNLYRGIRQRPWGKWAAEIRDPRK
        MCGGAIISD+   + + + RKL+ E LWS +D     D  G  YS  K     + +    AV  E+       + RKN+YRGIR+RPWGKWAAEIRDPRK
Subjt:  MCGGAIISDF---IERKRTRKLSNESLWSHID--PCSDLLGLNYSPVKSEKPKKRDRATAAVAVEKTP-----KARKNLYRGIRQRPWGKWAAEIRDPRK

Query:  GVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFA----PAPPS---SPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYG--
        GVRVWLGTFNTAEEAA AYD AAK+IRG+KAKLNF     P PP+    P  P +  Q PAKK CV+ +     S  + P  C    N  +     YG  
Subjt:  GVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFA----PAPPS---SPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYG--

Query:  ------EELASLRSFLGLD-SEEQQASQFGGNGEFERVDVDLWMMDDM
              ++++SL SFL LD +  +Q SQ   +      +VD+WM+DD+
Subjt:  ------EELASLRSFLGLD-SEEQQASQFGGNGEFERVDVDLWMMDDM

Q6K7E6 Ethylene-responsive transcription factor 15.3e-2564.13Show/hide
Query:  AVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCV
        A +   + RKN +RGIRQRPWGKWAAEIRDPRKGVRVWLGTFN+AEEAARAYD  A+RIRG+KAK+NF  AP ++    A    + A K  V
Subjt:  AVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCV

Q8H0T5 Ethylene-responsive transcription factor ERF0737.9e-2953.03Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLW--SHIDPCS--DLLGLNYSPVKSEKP---KKRDRATAAVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVR
        MCGGA+ISD+I  ++  + S +S W  + +  CS  D  G N+  ++S++P       +  A+ +     K + + Y+GIR+RPWG+WAAEIRDP KGVR
Subjt:  MCGGAIISDFIERKRTRKLSNESLW--SHIDPCS--DLLGLNYSPVKSEKP---KKRDRATAAVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVR

Query:  VWLGTFNTAEEAARAYDEAAKRIRGEKAKLNF
        VWLGTFNTAEEAARAYD  AKRIRG KAKLNF
Subjt:  VWLGTFNTAEEAARAYDEAAKRIRGEKAKLNF

Q9SSA8 Ethylene-responsive transcription factor RAP2-125.7e-2738.33Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLW-------------------------------------SHIDPCSDL-LGLNYSPVK------SEKPKKRDRATAA
        MCGGAIISDFI   R+R++++E +W                                     S ID   D  +G  ++ VK      + KP     A  +
Subjt:  MCGGAIISDFIERKRTRKLSNESLW-------------------------------------SHIDPCSDL-LGLNYSPVK------SEKPKKRDRATAA

Query:  V-----------AVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAK
        V           A +   + RKN YRGIRQRPWGKWAAEIRDPR+G R+WLGTF TAEEAARAYD AA+RIRG KAK+NF          P    ++ ++
Subjt:  V-----------AVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAK

Query:  KRCVLPELTRGGSNATGPPPCRRVDNS
        KR V   L +  +     P    V NS
Subjt:  KRCVLPELTRGGSNATGPPPCRRVDNS

Arabidopsis top hitse value%identityAlignment
AT1G53910.3 related to AP2 128.1e-2939.11Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLW-------------------------------------SHIDPCSDL-LGLNYSPVK----SEKPKKRDRATAAV-
        MCGGAIISDFI   R+R++++E +W                                     S ID   D  +G  ++ VK    +  PK    A A V 
Subjt:  MCGGAIISDFIERKRTRKLSNESLW-------------------------------------SHIDPCSDL-LGLNYSPVK----SEKPKKRDRATAAV-

Query:  ----------AVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKR
                  A +   + RKN YRGIRQRPWGKWAAEIRDPR+G R+WLGTF TAEEAARAYD AA+RIRG KAK+NF          P    ++ ++KR
Subjt:  ----------AVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKR

Query:  CVLPELTRGGSNATGPPPCRRVDNS
         V   L +  +     P    V NS
Subjt:  CVLPELTRGGSNATGPPPCRRVDNS

AT1G72360.2 Integrase-type DNA-binding superfamily protein5.6e-3053.03Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLW--SHIDPCS--DLLGLNYSPVKSEKP---KKRDRATAAVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVR
        MCGGA+ISD+I  ++  + S +S W  + +  CS  D  G N+  ++S++P       +  A+ +     K + + Y+GIR+RPWG+WAAEIRDP KGVR
Subjt:  MCGGAIISDFIERKRTRKLSNESLW--SHIDPCS--DLLGLNYSPVKSEKP---KKRDRATAAVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVR

Query:  VWLGTFNTAEEAARAYDEAAKRIRGEKAKLNF
        VWLGTFNTAEEAARAYD  AKRIRG KAKLNF
Subjt:  VWLGTFNTAEEAARAYDEAAKRIRGEKAKLNF

AT1G72360.3 Integrase-type DNA-binding superfamily protein2.8e-2953.79Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLW--SHIDPCS--DLLGLNYSPVKSEKP---KKRDRATAAVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVR
        MCGGA+ISD+I  ++  + S +S W  + +  CS  D  G N+  ++S++P       +  A+ +  K  K + + Y+GIR+RPWG+WAAEIRDP KGVR
Subjt:  MCGGAIISDFIERKRTRKLSNESLW--SHIDPCS--DLLGLNYSPVKSEKP---KKRDRATAAVAVEKTPKARKNLYRGIRQRPWGKWAAEIRDPRKGVR

Query:  VWLGTFNTAEEAARAYDEAAKRIRGEKAKLNF
        VWLGTFNTAEEAARAYD  AKRIRG KAKLNF
Subjt:  VWLGTFNTAEEAARAYDEAAKRIRGEKAKLNF

AT2G47520.1 Integrase-type DNA-binding superfamily protein2.1e-2959.52Show/hide
Query:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATAAVAVEKTPK-ARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTF
        MCGGAIISDFI             WS  +     LG     V S K +K      +V+ E+  K  RKNLYRGIRQRPWGKWAAEIRDP KGVRVWLGTF
Subjt:  MCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATAAVAVEKTPK-ARKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTF

Query:  NTAEEAARAYDEAAKRIRGEKAKLNF
         TA+EAARAYD AA +IRG KAKLNF
Subjt:  NTAEEAARAYDEAAKRIRGEKAKLNF

AT3G16770.1 ethylene-responsive element binding protein7.6e-4345.56Show/hide
Query:  MCGGAIISDF---IERKRTRKLSNESLWSHID--PCSDLLGLNYSPVKSEKPKKRDRATAAVAVEKTP-----KARKNLYRGIRQRPWGKWAAEIRDPRK
        MCGGAIISD+   + + + RKL+ E LWS +D     D  G  YS  K     + +    AV  E+       + RKN+YRGIR+RPWGKWAAEIRDPRK
Subjt:  MCGGAIISDF---IERKRTRKLSNESLWSHID--PCSDLLGLNYSPVKSEKPKKRDRATAAVAVEKTP-----KARKNLYRGIRQRPWGKWAAEIRDPRK

Query:  GVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFA----PAPPS---SPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYG--
        GVRVWLGTFNTAEEAA AYD AAK+IRG+KAKLNF     P PP+    P  P +  Q PAKK CV+ +     S  + P  C    N  +     YG  
Subjt:  GVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFA----PAPPS---SPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYG--

Query:  ------EELASLRSFLGLD-SEEQQASQFGGNGEFERVDVDLWMMDDM
              ++++SL SFL LD +  +Q SQ   +      +VD+WM+DD+
Subjt:  ------EELASLRSFLGLD-SEEQQASQFGGNGEFERVDVDLWMMDDM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAAGGTGAGAAAAGTAAATGTGATTTGTCAGACTCTTAGTGGATATGCTAAAAGCCCAATCCCTAGTCTCCATTTTAGGGCCCAAATTGAAGGCCCATTTAGAAT
GTGCGGTGGTGCCATCATCTCTGATTTCATTGAAAGAAAGCGAACTCGGAAACTTAGCAATGAATCTCTCTGGTCCCACATCGACCCTTGCTCCGACCTCCTCGGCCTCA
ATTATTCCCCTGTGAAAAGCGAGAAGCCTAAGAAAAGAGATCGAGCTACGGCGGCGGTGGCGGTGGAGAAGACTCCAAAAGCTCGGAAGAATTTGTACAGAGGAATCCGG
CAACGGCCGTGGGGAAAATGGGCGGCGGAGATCCGGGACCCACGTAAAGGAGTTCGTGTTTGGCTCGGCACTTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGATGA
AGCAGCCAAACGGATCCGAGGAGAAAAGGCCAAGCTCAACTTTGCTCCGGCGCCGCCGTCTTCGCCGCCGTTACCAGCGGCTCAGCCTCAATCCCCGGCGAAAAAGCGGT
GCGTTCTCCCCGAGTTGACTCGGGGTGGCTCTAACGCCACCGGTCCGCCTCCGTGCAGACGTGTGGATAACTCGTGTGACAGCGACGAGTTCTACTACGGCGAGGAATTA
GCGAGTTTGAGATCCTTCTTGGGATTGGATAGCGAGGAGCAACAGGCGAGTCAATTCGGTGGAAATGGCGAGTTTGAGCGAGTTGATGTAGACCTTTGGATGATGGACGA
CATGTCGTTGAATGAGCAGAAATTGAGTCAGCTGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAAGGTGAGAAAAGTAAATGTGATTTGTCAGACTCTTAGTGGATATGCTAAAAGCCCAATCCCTAGTCTCCATTTTAGGGCCCAAATTGAAGGCCCATTTAGAAT
GTGCGGTGGTGCCATCATCTCTGATTTCATTGAAAGAAAGCGAACTCGGAAACTTAGCAATGAATCTCTCTGGTCCCACATCGACCCTTGCTCCGACCTCCTCGGCCTCA
ATTATTCCCCTGTGAAAAGCGAGAAGCCTAAGAAAAGAGATCGAGCTACGGCGGCGGTGGCGGTGGAGAAGACTCCAAAAGCTCGGAAGAATTTGTACAGAGGAATCCGG
CAACGGCCGTGGGGAAAATGGGCGGCGGAGATCCGGGACCCACGTAAAGGAGTTCGTGTTTGGCTCGGCACTTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGATGA
AGCAGCCAAACGGATCCGAGGAGAAAAGGCCAAGCTCAACTTTGCTCCGGCGCCGCCGTCTTCGCCGCCGTTACCAGCGGCTCAGCCTCAATCCCCGGCGAAAAAGCGGT
GCGTTCTCCCCGAGTTGACTCGGGGTGGCTCTAACGCCACCGGTCCGCCTCCGTGCAGACGTGTGGATAACTCGTGTGACAGCGACGAGTTCTACTACGGCGAGGAATTA
GCGAGTTTGAGATCCTTCTTGGGATTGGATAGCGAGGAGCAACAGGCGAGTCAATTCGGTGGAAATGGCGAGTTTGAGCGAGTTGATGTAGACCTTTGGATGATGGACGA
CATGTCGTTGAATGAGCAGAAATTGAGTCAGCTGGTGTAAGTGTAAAAGTCAGATTGACTGTTTAGTCCGACATGTCGTTTATTGCTATGTAGGTTTGTAATATTTTAAT
GTTTTTGTATGAACTTTGGAGTGTGTAGCTTGTAGATATAATGGAGGATATTCAATAAAGGCTTGCGATATGATGCTGTGTTTGGAACGACATGTCGGTTCGTGTATCAG
ATCGGACTTGCTTATCTATTTATTTTTAATATTCACCGCTTTGTAGTTGTTTTATTATTATT
Protein sequenceShow/hide protein sequence
MIKVRKVNVICQTLSGYAKSPIPSLHFRAQIEGPFRMCGGAIISDFIERKRTRKLSNESLWSHIDPCSDLLGLNYSPVKSEKPKKRDRATAAVAVEKTPKARKNLYRGIR
QRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSPPLPAAQPQSPAKKRCVLPELTRGGSNATGPPPCRRVDNSCDSDEFYYGEEL
ASLRSFLGLDSEEQQASQFGGNGEFERVDVDLWMMDDMSLNEQKLSQLV