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CaUC06G112100 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G112100
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionLow-density receptor-like protein
Genome locationCiama_Chr06:6619893..6629916
RNA-Seq ExpressionCaUC06G112100
SyntenyCaUC06G112100
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458514.1 PREDICTED: uncharacterized protein LOC103497900 isoform X1 [Cucumis melo]7.0e-4193.75Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQLQM
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV D NDGKKAGSVAIRRLLHQ+++
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQLQM
XP_011656652.1 uncharacterized protein LOC101217077 isoform X2 [Cucumis sativus]9.1e-4192.78Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQLQMD
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHD NDGKKAGS AIRRLLHQ + +
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQLQMD
XP_011656653.1 uncharacterized protein LOC101217077 isoform X3 [Cucumis sativus]9.1e-4195.74Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQL
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHD NDGKKAGS AIRRLLHQ+
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQL
XP_038875265.1 uncharacterized protein LOC120067764 isoform X1 [Benincasa hispida]7.0e-4195.74Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQL
        MASSTARITFRVIMVV LLLV FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHD NDGKKAGSVAIRRLLHQ+
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQL
XP_038875268.1 uncharacterized protein LOC120067764 isoform X2 [Benincasa hispida]3.1e-4196.81Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQL
        MASSTARITFRVIMVV LLLV FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHD NDGKKAGSVAIRRLLHQL
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQL
TrEMBL top hitse value%identityAlignment
A0A0A0KBE9 Uncharacterized protein5.7e-4195.74Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQL
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHD NDGKKAGS AIRRLLHQ+
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQL
A0A1S3C7I8 uncharacterized protein LOC103497900 isoform X25.7e-4195.74Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQL
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV D NDGKKAGSVAIRRLLHQ+
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQL
A0A1S3C994 uncharacterized protein LOC103497900 isoform X13.4e-4193.75Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQLQM
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV D NDGKKAGSVAIRRLLHQ+++
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQLQM
A0A6J1ER65 uncharacterized protein LOC111436812 isoform X42.2e-4090.62Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQLQM
        MASS ARITFRV+MVV+LLLV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSGVHD  DGKKAGSVA RRLLHQ QM
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQLQM
A0A6J1EUV5 uncharacterized protein LOC111436812 isoform X33.7e-4089.58Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQLQM
        MASS ARITFRV+MVV+LLLV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSGVHD  DGKKAGSVA RRLLHQ+Q+
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQLQM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18850.1 unknown protein3.2e-2865.56Show/hide
Query:  ASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLL
        +S T RI FR ++++ L++VLFYVGRPLYWKISAT+HDIR NKQ+V+EG+SQIV EAQ+SVGWYHDESDSG  + ++ KK+G    RRLL
Subjt:  ASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGTCGACGGCAAGGATTACGTTTCGCGTTATCATGGTGGTGATCCTCCTCCTCGTCTTATTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCCACTGT
ACATGATATTCGTCAGAACAAACAGACCGTCAAGGAAGGCCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCC
ATGACGCAAATGATGGAAAGAAGGCCGGATCGGTTGCTATTCGGAGGCTTCTTCATCAGTTACAGATGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATTTAAACTACAATACAACTGGCATAAGTGACAAAAATGAAATAGAAACAAATATAAATACCAAGGAGGAAACGCCGAGCTTCCCTTCTTCTTGCCTGATCTAAACATTT
CAACTCCATCGCGGGAATCTCTGAGCTCTCTCTATCTCTCTCTATCTCTCTCTCTGTTTCTCTCTTCCAGACATAGCCACCGGAAACAATGGCGTCGTCGACGGCAAGGA
TTACGTTTCGCGTTATCATGGTGGTGATCCTCCTCCTCGTCTTATTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCCACTGTACATGATATTCGTCAGAACAAA
CAGACCGTCAAGGAAGGCCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCCATGACGCAAATGATGGAAAGAA
GGCCGGATCGGTTGCTATTCGGAGGCTTCTTCATCAGTTACAGATGGATTGAAATCATCACATCTGAGTAATTCCTTTGAATTTGCTGAATTCATCACATCTGAATTATT
TACAAACAGCCAAACATAGTGCTAAAGAAGATGAGCAGAACCAAGGCAACAAGCCAACAACCACCTATCAAATTAGGTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDANDGKKAGSVAIRRLLHQLQMD