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CaUC06G116100 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G116100
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCholine-phosphate cytidylyltransferase
Genome locationCiama_Chr06:15680776..15685621
RNA-Seq ExpressionCaUC06G116100
SyntenyCaUC06G116100
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035255.1 choline-phosphate cytidylyltransferase [Cucumis melo var. makuwa]2.9e-0755.56Show/hide
Query:  QGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
        +GW I+Y+RN +E EFE W+ALM++L  V   + RDKW WN DKN
Subjt:  QGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
KAA0057629.1 retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]8.0e-1049.21Show/hide
Query:  YTLATHKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
        Y LAT+KLS V+N W++  GW    +RN +E+E E  +ALMN++  +   S RDKW WN DKN
Subjt:  YTLATHKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
KAE8649124.1 hypothetical protein Csa_014630 [Cucumis sativus]6.8e-0969.57Show/hide
Query:  TLATHKLSTVNNCWDEQQG--WTITYKRNFKEDEFEGWMALMNILD
        TLA +K STVNN WDEQ G  WTITY+RNFKEDEFE WMAL+ +++
Subjt:  TLATHKLSTVNNCWDEQQG--WTITYKRNFKEDEFEGWMALMNILD
KGN44355.1 hypothetical protein Csa_016666 [Cucumis sativus]3.3e-1152.54Show/hide
Query:  THKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
        T+ L+TV+N W+++ GW I+Y+RN KE+EFE W+ L N+L  V     RDKW WN DKN
Subjt:  THKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
TrEMBL top hitse value%identityAlignment
A0A0A0K3T0 Uncharacterized protein1.6e-1152.54Show/hide
Query:  THKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
        T+ L+TV+N W+++ GW I+Y+RN KE+EFE W+ L N+L  V     RDKW WN DKN
Subjt:  THKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
A0A5A7T1C2 Choline-phosphate cytidylyltransferase1.4e-0755.56Show/hide
Query:  QGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
        +GW I+Y+RN +E EFE W+ALM++L  V   + RDKW WN DKN
Subjt:  QGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
A0A5A7UVQ5 Retrotransposon protein, putative, unclassified3.9e-1049.21Show/hide
Query:  YTLATHKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
        Y LAT+KLS V+N W++  GW    +RN +E+E E  +ALMN++  +   S RDKW WN DKN
Subjt:  YTLATHKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTCTACTCCTACACATTGGCCACTCACAAGCTGTCCACCGTTAACAATTGTTGGGATGAACAACAAGGATGGACCATCACATACAAAAGGAACTTTAAAGAAGA
TGAATTTGAAGGTTGGATGGCTCTCATGAACATTCTTGATGGAGTTCGGCTGGCCTCCATAAGAGATAAATGGGTTTGGAATCCTGACAAAAATGTTTTTCTCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTCTACTCCTACACATTGGCCACTCACAAGCTGTCCACCGTTAACAATTGTTGGGATGAACAACAAGGATGGACCATCACATACAAAAGGAACTTTAAAGAAGA
TGAATTTGAAGGTTGGATGGCTCTCATGAACATTCTTGATGGAGTTCGGCTGGCCTCCATAAGAGATAAATGGGTTTGGAATCCTGACAAAAATGTTTTTCTCCACTAA
Protein sequenceShow/hide protein sequence
MKLYSYTLATHKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASIRDKWVWNPDKNVFLH