| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032332.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.5e-33 | 35.53 | Show/hide |
Query: RTGIRDVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------------------------------
RT D S++NKFK +EM VF G DP +WLFRA+RYFQIH+LTE+EK++V ISF
Subjt: RTGIRDVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------------------------------
Query: ---EESSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM----------------------------
+E SVEEYINLFDK+V P+ L + ++E+TFMNGL+PW A ++ A + +N E + M
Subjt: ---EESSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM----------------------------
Query: -----------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
RTITL++ A REG +KRL +AEF++ KEKGLCFRC+E+Y+ H+ ++K+QRELR+ ++
Subjt: -----------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
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| KAA0040882.1 transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | 7.6e-34 | 40.93 | Show/hide |
Query: EKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------EESSVEEYINLFDKLVVPLPHLSDEILENTFMN
++NKFK ++MLVF DP +WLFRA+RYFQ HKL+E+EK++V ++F +ES+VEEY NLFDK+V PL L + ++E+TFMN
Subjt: EKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------EESSVEEYINLFDKLVVPLPHLSDEILENTFMN
Query: GLVPW----------------ANVIVAKETAKNAEAIS--------------MRTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGH
GL+PW ++ V ++ N +A+S +RTITL++ REG +KRL + EF+ KEKGLCFRC+E+Y+ H
Subjt: GLVPW----------------ANVIVAKETAKNAEAIS--------------MRTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGH
Query: RRKIKDQRELRVLLV
+ K+K+QRELR+ +V
Subjt: RRKIKDQRELRVLLV
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| KAA0044242.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa] | 5.8e-34 | 39.13 | Show/hide |
Query: DVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF-----------------------------------------------EE
D S++NKFK +EM VF G DP +WLFRA+RYFQIH+LTE+EK++V ISF +E
Subjt: DVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF-----------------------------------------------EE
Query: SSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISMRT-ITLQNIAPAGVHREGVFKRLKNAEFKS-KE
SVEEYINLFDK+V P+ L + ++E+TFMNGL+PW A ++ A + +N E + M ++ + A REG +KRL +AEF++ KE
Subjt: SSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISMRT-ITLQNIAPAGVHREGVFKRLKNAEFKS-KE
Query: KGLCFRCDERYTVGHRRKIKDQRELRVLLV
KGLCFRC+E+Y+ H+ ++K+QRELR+ ++
Subjt: KGLCFRCDERYTVGHRRKIKDQRELRVLLV
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| KAA0063978.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.1e-32 | 35.82 | Show/hide |
Query: DVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF-----------------------------------------------EE
D S++ KFK +EM VF G DP +WLFRA+RYFQIH+LTE+EK++V+ ISF +E
Subjt: DVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF-----------------------------------------------EE
Query: SSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM---------------------------------
SVEEYINLFDK+V P+ L + ++E+TFMNGL+PW A ++ A + +N E + M
Subjt: SSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM---------------------------------
Query: ------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
RTITL++ A REG +KRL +AEF++ KEKGLCFRC+E+Y+ HR ++K+QRELR+ +V
Subjt: ------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
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| TYK03866.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.5e-33 | 35.53 | Show/hide |
Query: RTGIRDVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------------------------------
RT D S++NKFK +EM VF G DP +WLFRA+RYFQIH+LTE+EK++V ISF
Subjt: RTGIRDVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------------------------------
Query: ---EESSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM----------------------------
+E SVEEYINLFDK+V P+ L + ++E+TFMNGL+PW A ++ A + +N E + M
Subjt: ---EESSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM----------------------------
Query: -----------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
RTITL++ A REG +KRL +AEF++ KEKGLCFRC+E+Y+ H+ ++K+QRELR+ ++
Subjt: -----------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMR6 Ty3/gypsy retrotransposon protein | 3.1e-33 | 35.53 | Show/hide |
Query: RTGIRDVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------------------------------
RT D S++NKFK +EM VF G DP +WLFRA+RYFQIH+LTE+EK++V ISF
Subjt: RTGIRDVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------------------------------
Query: ---EESSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM----------------------------
+E SVEEYINLFDK+V P+ L + ++E+TFMNGL+PW A ++ A + +N E + M
Subjt: ---EESSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM----------------------------
Query: -----------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
RTITL++ A REG +KRL +AEF++ KEKGLCFRC+E+Y+ H+ ++K+QRELR+ ++
Subjt: -----------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
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| A0A5A7TBP9 Transposon Ty3-G Gag-Pol polyprotein | 3.7e-34 | 40.93 | Show/hide |
Query: EKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------EESSVEEYINLFDKLVVPLPHLSDEILENTFMN
++NKFK ++MLVF DP +WLFRA+RYFQ HKL+E+EK++V ++F +ES+VEEY NLFDK+V PL L + ++E+TFMN
Subjt: EKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------EESSVEEYINLFDKLVVPLPHLSDEILENTFMN
Query: GLVPW----------------ANVIVAKETAKNAEAIS--------------MRTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGH
GL+PW ++ V ++ N +A+S +RTITL++ REG +KRL + EF+ KEKGLCFRC+E+Y+ H
Subjt: GLVPW----------------ANVIVAKETAKNAEAIS--------------MRTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGH
Query: RRKIKDQRELRVLLV
+ K+K+QRELR+ +V
Subjt: RRKIKDQRELRVLLV
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| A0A5A7TLN3 Transposon Tf2-9 polyprotein | 2.8e-34 | 39.13 | Show/hide |
Query: DVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF-----------------------------------------------EE
D S++NKFK +EM VF G DP +WLFRA+RYFQIH+LTE+EK++V ISF +E
Subjt: DVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF-----------------------------------------------EE
Query: SSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISMRT-ITLQNIAPAGVHREGVFKRLKNAEFKS-KE
SVEEYINLFDK+V P+ L + ++E+TFMNGL+PW A ++ A + +N E + M ++ + A REG +KRL +AEF++ KE
Subjt: SSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISMRT-ITLQNIAPAGVHREGVFKRLKNAEFKS-KE
Query: KGLCFRCDERYTVGHRRKIKDQRELRVLLV
KGLCFRC+E+Y+ H+ ++K+QRELR+ ++
Subjt: KGLCFRCDERYTVGHRRKIKDQRELRVLLV
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| A0A5D3BZJ8 Ty3/gypsy retrotransposon protein | 5.3e-33 | 35.82 | Show/hide |
Query: DVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF-----------------------------------------------EE
D S++ KFK +EM VF G DP +WLFRA+RYFQIH+LTE+EK++V+ ISF +E
Subjt: DVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF-----------------------------------------------EE
Query: SSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM---------------------------------
SVEEYINLFDK+V P+ L + ++E+TFMNGL+PW A ++ A + +N E + M
Subjt: SSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM---------------------------------
Query: ------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
RTITL++ A REG +KRL +AEF++ KEKGLCFRC+E+Y+ HR ++K+QRELR+ +V
Subjt: ------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
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| A0A5D3C091 Ty3/gypsy retrotransposon protein | 3.1e-33 | 35.53 | Show/hide |
Query: RTGIRDVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------------------------------
RT D S++NKFK +EM VF G DP +WLFRA+RYFQIH+LTE+EK++V ISF
Subjt: RTGIRDVESEKNKFKMVEMLVFNGTDPYTWLFRAKRYFQIHKLTEAEKLIVVVISF--------------------------------------------
Query: ---EESSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM----------------------------
+E SVEEYINLFDK+V P+ L + ++E+TFMNGL+PW A ++ A + +N E + M
Subjt: ---EESSVEEYINLFDKLVVPLPHLSDEILENTFMNGLVPW-------------ANVIVAKETAKNAEAISM----------------------------
Query: -----------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
RTITL++ A REG +KRL +AEF++ KEKGLCFRC+E+Y+ H+ ++K+QRELR+ ++
Subjt: -----------RTITLQNIAPAGVHREGVFKRLKNAEFKS-KEKGLCFRCDERYTVGHRRKIKDQRELRVLLV
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