; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC06G116540 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G116540
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionAuxin-regulated gene involved in organ size
Genome locationCiama_Chr06:17583612..17584052
RNA-Seq ExpressionCaUC06G116540
SyntenyCaUC06G116540
Gene Ontology termsGO:0009725 - response to hormone (biological process)
GO:0046622 - positive regulation of organ growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR037468 - ARGOS/ARL/OSR1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601768.1 hypothetical protein SDJN03_07001, partial [Cucurbita argyrosperma subsp. sororia]3.6e-3361.04Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLHQP--------TQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLA
        M+LG  + +  GVPN DDF+++H            HH YF+    S  +  SS++T     Y AA Q +R +EYTRSLSQG+ RRLVPAA+YL VL+ LA
Subjt:  MTLGFQEAEKRGVPNRDDFLNLHQP--------TQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLA

Query:  ASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM
        ASLLILPL+LPPLP PPLMLLLLLPIGILGMLMVLAFMPSND K  I SSHTYM
Subjt:  ASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM

KGN61450.1 hypothetical protein Csa_006551 [Cucumis sativus]1.2e-5786.99Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLHQPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILPL
        MTLGFQEAEKRGVPN + FL+LHQP+Q+H Y MDG +SNNSN+ SDSTNRI+YYAAAAQ RRK+EY RSLSQG+PRRLVPAASYLGVLLCLAASLLILPL
Subjt:  MTLGFQEAEKRGVPNRDDFLNLHQPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILPL

Query:  VLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM
        VLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTK I SSSHTYM
Subjt:  VLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM

XP_022974015.1 ARGOS-like protein [Cucurbita maxima]1.1e-3463.09Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLHQPTQ---HHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLI
        M+LG  +A+  GVPN DDF ++H       HH YF+    S  +  SS++T     Y AA Q +R +EYTRSLSQG+ RRLVPAA+YL VL+CLAASLLI
Subjt:  MTLGFQEAEKRGVPNRDDFLNLHQPTQ---HHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLI

Query:  LPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM
        LPL+LPPLPPPPLMLLLLLPIGI+GMLMVLAFMPSN  K I SS  TYM
Subjt:  LPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM

XP_023514167.1 ARGOS-like protein [Cucurbita pepo subsp. pepo]8.0e-3359.49Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLH------------QPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVL
        M+LG  + +  GVPN DDF+++              P  HH YF+    S  +  SS +        AA Q +R +EYTRSLSQG+ RRLVPAA+YL VL
Subjt:  MTLGFQEAEKRGVPNRDDFLNLH------------QPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVL

Query:  LCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM
        +CLAASLLILPL+LPPLP PPLMLLLLLPIGILGMLMVLAFMPSND K  ISSSHTYM
Subjt:  LCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM

XP_038875191.1 ARGOS-like protein [Benincasa hispida]2.8e-5486.49Show/hide
Query:  MTLGFQE-AEKRGVPNRDDFLNLHQPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILP
        M+LGFQE AEK+GVPN DDFLNL Q TQH+ + MDG T NNSN+SSDSTNRISYY AAAQHRRK+EY+RSLSQG+PRRLVPAASYLGVLLCLAASLLILP
Subjt:  MTLGFQE-AEKRGVPNRDDFLNLHQPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILP

Query:  LVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGII-SSSHTYM
        LVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTK I  SSSHTYM
Subjt:  LVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGII-SSSHTYM

TrEMBL top hitse value%identityAlignment
A0A061ERG1 Auxin-regulated gene involved in organ size2.0e-1361.11Show/hide
Query:  RRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM
        R+K+EY RS SQG  RRL+P + +    L +L+CL ASLLILPL+LPPLPPPP  LLLLLPIGIL +LM+LAFMPSN    +   ++TYM
Subjt:  RRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM

A0A0A0LHQ4 Uncharacterized protein6.0e-5886.99Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLHQPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILPL
        MTLGFQEAEKRGVPN + FL+LHQP+Q+H Y MDG +SNNSN+ SDSTNRI+YYAAAAQ RRK+EY RSLSQG+PRRLVPAASYLGVLLCLAASLLILPL
Subjt:  MTLGFQEAEKRGVPNRDDFLNLHQPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILPL

Query:  VLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM
        VLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTK I SSSHTYM
Subjt:  VLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM

A0A2C9VY78 Uncharacterized protein3.4e-1355.88Show/hide
Query:  NSNYSSDSTNRISYYAAAAQHRR----KIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMP
        +SN     + ++S  + +  H R    K+EY RSLSQGS R+L PA+ +    L +L+CL ASLLILPL+LPPLPPPP  LLLLLPIGIL +LM+LAFMP
Subjt:  NSNYSSDSTNRISYYAAAAQHRR----KIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMP

Query:  SN
        +N
Subjt:  SN

A0A6J1EU41 ARGOS-like protein1.5e-3259.87Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLH------QPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAAS
        M+LG  + +  GVPN DDF+++H       P  HH YF+                    + AA Q +R +EYTRSLSQG+ RRLVPAA+YL VL+CLAAS
Subjt:  MTLGFQEAEKRGVPNRDDFLNLH------QPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAAS

Query:  LLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM
        LLILPL+LPPLP PPLMLLLLLPIGILGMLMVLAFMPSND K  ISSSHT M
Subjt:  LLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM

A0A6J1ICV1 ARGOS-like protein5.4e-3563.09Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLHQPTQ---HHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLI
        M+LG  +A+  GVPN DDF ++H       HH YF+    S  +  SS++T     Y AA Q +R +EYTRSLSQG+ RRLVPAA+YL VL+CLAASLLI
Subjt:  MTLGFQEAEKRGVPNRDDFLNLHQPTQ---HHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLI

Query:  LPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM
        LPL+LPPLPPPPLMLLLLLPIGI+GMLMVLAFMPSN  K I SS  TYM
Subjt:  LPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE9.3e-0840.91Show/hide
Query:  RGVPN-RDDFLNLHQPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASY-----LGVLLCLAASLLILPLVLPP
        R  PN ++D +N+ +   ++     G   N    S  + N      A      K E  R+ S  S +RL+  A+Y     L +L+ L ASLLILPLVLPP
Subjt:  RGVPN-RDDFLNLHQPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASY-----LGVLLCLAASLLILPLVLPP

Query:  LPPPPLMLLLLLPIGILGMLMVLAFMPSNDTK
        LPPPP M LLL+PIGI+ +L++LAFMPS+ ++
Subjt:  LPPPPLMLLLLLPIGILGMLMVLAFMPSNDTK

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE7.1e-0849Show/hide
Query:  SNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSN
        SNN        NR +    ++  + K E  RS S    R ++PA  +    L +L+ L ASLLILPLVLPPLPPPP M LLL+PIGI+ +L+VLAFMPS+
Subjt:  SNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSN

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE5.6e-0563.04Show/hide
Query:  VLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPS
        +L+C+ ASL+ILPLVLPPLPPPP M L+L+P+ +L +L+ LAFMP+
Subjt:  VLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPS

Q8RXL7 ARGOS-like protein1.6e-1250.86Show/hide
Query:  SNNSNYSSDSTNRISYY--AAAAQHRRKIEYTRSL-SQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFM
        +NN +   D   + + +  +A A    K E  R+L SQ SPRRL+ A+ +    + VL+ L ASLLILPL+LPPLPPPP M LLL+PIGI+ +LMVLAFM
Subjt:  SNNSNYSSDSTNRISYY--AAAAQHRRKIEYTRSL-SQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFM

Query:  PSNDTKGIISSSHTYM
        PS+++K  +SSS T+M
Subjt:  PSNDTKGIISSSHTYM

Arabidopsis top hitse value%identityAlignment
AT2G44080.1 ARGOS-like1.2e-1350.86Show/hide
Query:  SNNSNYSSDSTNRISYY--AAAAQHRRKIEYTRSL-SQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFM
        +NN +   D   + + +  +A A    K E  R+L SQ SPRRL+ A+ +    + VL+ L ASLLILPL+LPPLPPPP M LLL+PIGI+ +LMVLAFM
Subjt:  SNNSNYSSDSTNRISYY--AAAAQHRRKIEYTRSL-SQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFM

Query:  PSNDTKGIISSSHTYM
        PS+++K  +SSS T+M
Subjt:  PSNDTKGIISSSHTYM

AT3G59900.1 auxin-regulated gene involved in organ size5.1e-0949Show/hide
Query:  SNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSN
        SNN        NR +    ++  + K E  RS S    R ++PA  +    L +L+ L ASLLILPLVLPPLPPPP M LLL+PIGI+ +L+VLAFMPS+
Subjt:  SNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTTGGATTTCAAGAAGCCGAGAAGAGGGGAGTTCCGAATCGCGACGATTTCCTCAATTTGCACCAACCGACTCAACACCATTGTTATTTCATGGATGGAACAAC
CTCTAATAATTCCAATTACAGTTCCGATTCCACCAATAGGATTTCCTATTACGCCGCCGCCGCACAACATCGCCGGAAGATCGAGTACACGCGGTCTCTATCGCAGGGGT
CACCGCGACGGTTGGTGCCGGCGGCGAGTTATTTAGGGGTGCTGCTGTGCTTGGCGGCGTCGTTGTTGATTCTTCCGTTGGTTCTTCCGCCTCTGCCGCCGCCGCCGTTG
ATGCTGTTGCTGCTTCTGCCGATTGGGATTTTGGGAATGCTTATGGTGTTGGCGTTTATGCCTTCTAATGATACCAAGGGTATCATTTCCTCTTCTCATACATATATGTA
A
mRNA sequenceShow/hide mRNA sequence
ATGACTCTTGGATTTCAAGAAGCCGAGAAGAGGGGAGTTCCGAATCGCGACGATTTCCTCAATTTGCACCAACCGACTCAACACCATTGTTATTTCATGGATGGAACAAC
CTCTAATAATTCCAATTACAGTTCCGATTCCACCAATAGGATTTCCTATTACGCCGCCGCCGCACAACATCGCCGGAAGATCGAGTACACGCGGTCTCTATCGCAGGGGT
CACCGCGACGGTTGGTGCCGGCGGCGAGTTATTTAGGGGTGCTGCTGTGCTTGGCGGCGTCGTTGTTGATTCTTCCGTTGGTTCTTCCGCCTCTGCCGCCGCCGCCGTTG
ATGCTGTTGCTGCTTCTGCCGATTGGGATTTTGGGAATGCTTATGGTGTTGGCGTTTATGCCTTCTAATGATACCAAGGGTATCATTTCCTCTTCTCATACATATATGTA
A
Protein sequenceShow/hide protein sequence
MTLGFQEAEKRGVPNRDDFLNLHQPTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPL
MLLLLLPIGILGMLMVLAFMPSNDTKGIISSSHTYM