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CaUC06G118570 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G118570
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRING-type domain-containing protein
Genome locationCiama_Chr06:23434238..23434802
RNA-Seq ExpressionCaUC06G118570
SyntenyCaUC06G118570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022921934.1 uncharacterized protein LOC111430042 isoform X1 [Cucurbita moschata]5.1e-4984.3Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRS+LCLYTSNHETLLASNPSL+RSLL+EA+EDDKL+G AREAKRRLDERLRTQRKS   R+    
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR

Query:  KFNWTKLNWNGVEEDTCGQCW
        K NWTKLNW GVE+D CGQCW
Subjt:  KFNWTKLNWNGVEEDTCGQCW

XP_022921935.1 uncharacterized protein LOC111430042 isoform X2 [Cucurbita moschata]3.0e-4984.3Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRS+LCLYTSNHETLLASNPSL+RSLL+EA+EDDKL+G AREAKRRLDERLRTQRKS        R
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR

Query:  KFNWTKLNWNGVEEDTCGQCW
        K NWTKLNW GVE+D CGQCW
Subjt:  KFNWTKLNWNGVEEDTCGQCW

XP_022988483.1 uncharacterized protein LOC111485711 isoform X1 [Cucurbita maxima]2.5e-4883.47Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRS+LCLYTSNHETLLASNPSL+RSLL+EA+EDDKL G AREAKRRLDERLRTQ KS        R
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR

Query:  KFNWTKLNWNGVEEDTCGQCW
        KFNWTK NW GVE+D CGQCW
Subjt:  KFNWTKLNWNGVEEDTCGQCW

XP_023515554.1 uncharacterized protein LOC111779678 [Cucurbita pepo subsp. pepo]3.9e-4983.47Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR
        MAGMLPGVECARRRRCHQNKVWSDSP +AAQALTRRS+LCLYTSNHETLLASNPSL+RSLL+EA+EDDKL+G AREAKRRLDERLRTQRKS        R
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR

Query:  KFNWTKLNWNGVEEDTCGQCW
        KFNWTKLNW  VE+D CGQCW
Subjt:  KFNWTKLNWNGVEEDTCGQCW

XP_038876903.1 uncharacterized protein LOC120069257 [Benincasa hispida]6.2e-5589.26Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR
        MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRS+LCLYTSNHE+LLASNPSLQRSLL+EA ED++L+G AREAKRRLD+RLRTQRKSEDGREM RR
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR

Query:  KFNWTKLNWNGVEEDTCGQCW
        KF+WTKLNW+GVEED CGQCW
Subjt:  KFNWTKLNWNGVEEDTCGQCW

TrEMBL top hitse value%identityAlignment
A0A1S3B9W3 uncharacterized protein LOC103487385 isoform X12.7e-4882.11Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERL-RTQRKSED-GREMR
        MAGMLPGVECARRRRCHQNK+WSDSP + AQ LTRRS+LCLYTSNHE LL SNPS+QR LLMEA  +D+L+GIAREAKRRLDERL RTQRKSED GREM 
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERL-RTQRKSED-GREMR

Query:  RRKFNWTKLNWNGVEEDTCGQCW
        RRKF+W KLNW GVEED CGQCW
Subjt:  RRKFNWTKLNWNGVEEDTCGQCW

A0A5A7U973 Putative E3 ubiquitin-protein ligase RHY1A3.9e-4781.3Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERL-RTQRKSED-GREMR
        MAGMLPGVECARRRRCHQNK+WSDSP + AQ LTRRS+LCLYTSNHE LL SNPS+QR LLMEA  +D+L+GIAREAKRRLDERL RTQRKSED GREM 
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERL-RTQRKSED-GREMR

Query:  RRKFNWTKLNWNGVEEDTCGQCW
        RRKF+W KLNW GVEED  GQCW
Subjt:  RRKFNWTKLNWNGVEEDTCGQCW

A0A6J1E1Y4 uncharacterized protein LOC111430042 isoform X12.5e-4984.3Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRS+LCLYTSNHETLLASNPSL+RSLL+EA+EDDKL+G AREAKRRLDERLRTQRKS   R+    
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR

Query:  KFNWTKLNWNGVEEDTCGQCW
        K NWTKLNW GVE+D CGQCW
Subjt:  KFNWTKLNWNGVEEDTCGQCW

A0A6J1E765 uncharacterized protein LOC111430042 isoform X21.4e-4984.3Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRS+LCLYTSNHETLLASNPSL+RSLL+EA+EDDKL+G AREAKRRLDERLRTQRKS        R
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR

Query:  KFNWTKLNWNGVEEDTCGQCW
        K NWTKLNW GVE+D CGQCW
Subjt:  KFNWTKLNWNGVEEDTCGQCW

A0A6J1JME7 uncharacterized protein LOC111485711 isoform X11.2e-4883.47Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRS+LCLYTSNHETLLASNPSL+RSLL+EA+EDDKL G AREAKRRLDERLRTQ KS        R
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRR

Query:  KFNWTKLNWNGVEEDTCGQCW
        KFNWTK NW GVE+D CGQCW
Subjt:  KFNWTKLNWNGVEEDTCGQCW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15580.1 RING/U-box superfamily protein2.6e-1142.34Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPI-----------AAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEA---EEDDKLEGIAREAKRRLDERLR
        MAGMLPGVECARRRR H       +PPI           A    TRR    LYT+NHE+  A     +RS+  ++   + D+KL+G A+EAK+RL++RLR
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPI-----------AAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEA---EEDDKLEGIAREAKRRLDERLR

Query:  -TQRKSEDGRE
           R  ++G++
Subjt:  -TQRKSEDGRE

AT2G15580.2 RING/U-box superfamily protein4.3e-1440.83Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPPI-----------AAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEA---EEDDKLEGIAREAKRRLDERLR
        MAGMLPGVECARRRR H       +PPI           A    TRR    LYT+NHE+  A     +RS+  ++   + D+KL+G A+EAK+RL++RLR
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPPI-----------AAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEA---EEDDKLEGIAREAKRRLDERLR

Query:  TQRKSEDGREMRRRKFNWTK
           ++  G+ ++ +  NW+K
Subjt:  TQRKSEDGREMRRRKFNWTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGGTGTCATCAAAACAAAGTATGGTCAGATTCACCGCCAATCGCCGCTCAGGCCTTAACCAGAAGATC
CCTTCTCTGCTTGTACACAAGTAACCACGAAACGCTTCTCGCTTCAAATCCTTCTCTGCAAAGAAGCCTGTTAATGGAGGCAGAAGAAGACGATAAGTTGGAGGGAATTG
CGAGAGAAGCGAAGAGGAGATTGGATGAGCGATTGAGAACGCAGAGGAAATCGGAGGATGGAAGAGAAATGAGGAGGAGAAAGTTCAATTGGACGAAGTTGAATTGGAAT
GGCGTAGAGGAAGATACGTGCGGTCAGTGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGGTGTCATCAAAACAAAGTATGGTCAGATTCACCGCCAATCGCCGCTCAGGCCTTAACCAGAAGATC
CCTTCTCTGCTTGTACACAAGTAACCACGAAACGCTTCTCGCTTCAAATCCTTCTCTGCAAAGAAGCCTGTTAATGGAGGCAGAAGAAGACGATAAGTTGGAGGGAATTG
CGAGAGAAGCGAAGAGGAGATTGGATGAGCGATTGAGAACGCAGAGGAAATCGGAGGATGGAAGAGAAATGAGGAGGAGAAAGTTCAATTGGACGAAGTTGAATTGGAAT
GGCGTAGAGGAAGATACGTGCGGTCAGTGTTGGTGA
Protein sequenceShow/hide protein sequence
MAGMLPGVECARRRRCHQNKVWSDSPPIAAQALTRRSLLCLYTSNHETLLASNPSLQRSLLMEAEEDDKLEGIAREAKRRLDERLRTQRKSEDGREMRRRKFNWTKLNWN
GVEEDTCGQCW