; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC06G123280 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC06G123280
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRING-type domain-containing protein
Genome locationCiama_Chr06:28305634..28308684
RNA-Seq ExpressionCaUC06G123280
SyntenyCaUC06G123280
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039515 - NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 - CCR4-NOT transcription complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057903.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]3.2e-18694.81Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI +ENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

TYJ98591.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]1.1e-18694.83Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI +ENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISS

XP_004138290.2 uncharacterized protein LOC101211244 [Cucumis sativus]3.6e-18594.24Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DD+LSS+KINMREI +ENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNV+SQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLP TDRRFGCGG+ WACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPYDRDPADNETNV  GSPT PLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

XP_008453149.1 PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo]3.2e-18694.81Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI +ENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

XP_038878939.1 uncharacterized protein LOC120071026 [Benincasa hispida]3.6e-18594.83Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMR+I +ENDRSVH HSDF
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGC-GGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCL
        NELGVGDGDSGV RGRI QRASMNCRAWRPDDAFRPQSLP LSKQLSLPNTDRRFGC GGIPW CGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCL
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGC-GGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCL

Query:  FCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        FCHKRI+EEDGRCPGCRKPYDRDPAD+ETNV GGSP F LARSCSMIS
Subjt:  FCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

TrEMBL top hitse value%identityAlignment
A0A1S3BVJ1 uncharacterized protein LOC1034939471.6e-18694.81Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI +ENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

A0A5A7UPV5 Suppressor protein SRP40 isoform X21.6e-18694.81Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI +ENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

A0A5D3BIS7 Suppressor protein SRP40 isoform X25.4e-18794.83Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI +ENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISS

A0A6J1C357 uncharacterized protein LOC1110070163.6e-17590.78Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF
        MVTDSI NASISLAP+ARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKT +DDNLSSKKINMREI  +N  SVHH SDF
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        S+SPSNSPPS+ SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDKQHDQCSESSPRG+ VSQLDSCGDSR
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS ++ GRIAQRA M+CRAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPY+ DPAD+ETNVHGGSPT PLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

A0A6J1JM47 uncharacterized protein LOC1114856372.2e-17289.05Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKWNEEDNRLDS V+KT EDDNLSSKKIN REI +E+DRSVHHHSD 
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        S+SPSNSPPS+GSSILGGNDSG HFTGSSSSSSCRSSSSGCRSGSITEEEE+EE DDDCL+DWEA AD L ATDKQHDQCSESSPRG+VVSQL SCGDSR
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS ++ GRIA+RASMN RAWRPDDA RPQSLPTLSKQLSLPNTDRRFGCG +PWACGGV+ VPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPYDRDPADNETN H GSPTFPLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

SwissProt top hitse value%identityAlignment
O95628 CCR4-NOT transcription complex subunit 42.2e-1252.73Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

P34909 General negative regulator of transcription subunit 44.6e-1050Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD
        CP+C E +D+TD +F PC CG+++C FC+  I    E +GRCP CR+ YD
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD

Q09818 Putative general negative regulator of transcription C16C9.04c1.8e-0948Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD
        CP+C E++D++D +F PC CG+R+C FC   I E+ +GRCP CR+ Y  +
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD

Q8BT14 CCR4-NOT transcription complex subunit 42.2e-1252.73Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

Arabidopsis top hitse value%identityAlignment
AT1G74870.1 RING/U-box superfamily protein3.4e-1628.57Show/hide
Query:  KKRVRN--SKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSV--HHHSDFSDSPSNSPPSIGSSILGGND
        KKR  N   KLKQ K+D RR+QW+S+    N    E   RL S++      + L+ +K    +  D+ D  +     S F+ SP        +S+L   D
Subjt:  KKRVRN--SKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSV--HHHSDFSDSPSNSPPSIGSSILGGND

Query:  SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQR
        S              S    C S  +TEEEEE    DD  D+W+   DAL + +  +++ S          + D   D+   +            +  Q 
Subjt:  SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQR

Query:  ASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYD
        A+               ++   S +    N++++ G G               CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y 
Subjt:  ASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYD

Query:  R
        +
Subjt:  R

AT3G45630.1 RNA binding (RRM/RBD/RNP motifs) family protein4.3e-1142.86Show/hide
Query:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD
        +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PYD++
Subjt:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD

AT3G48070.1 RING/U-box superfamily protein3.9e-6546.35Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREI------VDENDRSV
        M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK   EE             +  + S+K + R++      +DE++   
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREI------VDENDRSV

Query:  HHHSDFSDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD
        H H  F +S SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE+ +  DD CLDDWEAIADALAA D++H++  E+ P        +
Subjt:  HHHSDFSDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD

Query:  SC---GDSRNELGVGDGDSGVQRGRI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFL
        SC    D +    +G  D  ++  +    +R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDS+FL
Subjt:  SC---GDSRNELGVGDGDSGVQRGRI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFL

Query:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSM
        PC CGFRLCLFCHK I + DGRCPGCRKPY+R+    E +V GG  T  LARS SM
Subjt:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSM

AT3G48070.2 RING/U-box superfamily protein3.9e-6546.35Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREI------VDENDRSV
        M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK   EE             +  + S+K + R++      +DE++   
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREI------VDENDRSV

Query:  HHHSDFSDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD
        H H  F +S SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE+ +  DD CLDDWEAIADALAA D++H++  E+ P        +
Subjt:  HHHSDFSDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD

Query:  SC---GDSRNELGVGDGDSGVQRGRI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFL
        SC    D +    +G  D  ++  +    +R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDS+FL
Subjt:  SC---GDSRNELGVGDGDSGVQRGRI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFL

Query:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSM
        PC CGFRLCLFCHK I + DGRCPGCRKPY+R+    E +V GG  T  LARS SM
Subjt:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSM

AT5G62910.1 RING/U-box superfamily protein4.7e-6646.48Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF
        M+TDSI NAS + AP  RD    KK+  +++K+KQ+KL +RREQWLS+ AV NK+  EE +     V ++++  + SS K+  RE  +    ++ HH  F
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDK----------QHDQCSESSPRGNVV
         +SPSNS        +GG  S  +F+G SS SS  SSSSG  SG+ITEEE  ++ DD C+DDWEA+ADALAA ++            +Q S      NV 
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDK----------QHDQCSESSPRGNVV

Query:  SQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLP
            S  D+ + +GV D     +  R++ R   + RAWR DD  RPQ LP L+KQLS P  D+RF            +++P+SCPIC+EDLDLTDS+FLP
Subjt:  SQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLP

Query:  CFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSM
        C CGFRLCLFCHK I + DGRCPGCRKPY+R+    ET++ GG  T  LARS SM
Subjt:  CFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCCCCAAACGCCAGGGATTTGCCCCTGCCCAAGAAGAAGAGGGTTAGGAATTCCAAATTGAAGCAG
TCCAAGCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTCAAGAACAAAAAATGGAACGAAGAGGACAATCGGCTTGATTCAGTGGTCATTAAAACG
AGGGAAGATGATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGTAGACGAGAACGATAGATCGGTTCACCACCATAGCGATTTTTCGGACTCACCGTCT
AATAGTCCTCCTAGTATTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGCAGTAGTAGCTGCCGTAGCAGCTCTAGCGGT
TGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAG
CAACATGATCAATGTTCCGAGTCTTCCCCTAGAGGCAATGTCGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTAGGCGTAGGAGATGGTGACTCG
GGTGTTCAGCGTGGGAGAATTGCGCAGAGGGCTTCGATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAA
CTTAGTTTACCAAATACAGACCGGCGTTTTGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTTATGTCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGAC
TTAGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGCTGC
AGGAAGCCATATGATCGTGATCCTGCCGACAATGAGACAAACGTACATGGCGGCAGCCCAACATTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGTGGCAGG
GCAGGACATGGTTGCTGGAAGACAGTTCCTCCTAGTTTCTGTAAATTGTTTTTGTTCCTTCTCAGGAATAAAGTTCACTATCTAAGCTTGTACATCAACTATGGG
ATTTCTATTAATTCTCTGTGTGTATTTTGGGCTCACTTTCACATTTCTGTAATTACGAAGGACAATCCTGTGGAATGGAGGCTAACTGGTATTTATCTCCATGAA
CGAGGCCGCTGCCCCTCAGCACAGGTGGTTGGCTGTTTCTGTCAGAGTTTGCAAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCCCCAAACGCCAGGGATTTGCCCCTGCCCAAGAAGAAGAGGGTTAGGAATTCCAAATTGAAGCAG
TCCAAGCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTCAAGAACAAAAAATGGAACGAAGAGGACAATCGGCTTGATTCAGTGGTCATTAAAACG
AGGGAAGATGATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGTAGACGAGAACGATAGATCGGTTCACCACCATAGCGATTTTTCGGACTCACCGTCT
AATAGTCCTCCTAGTATTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGCAGTAGTAGCTGCCGTAGCAGCTCTAGCGGT
TGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAG
CAACATGATCAATGTTCCGAGTCTTCCCCTAGAGGCAATGTCGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTAGGCGTAGGAGATGGTGACTCG
GGTGTTCAGCGTGGGAGAATTGCGCAGAGGGCTTCGATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAA
CTTAGTTTACCAAATACAGACCGGCGTTTTGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTTATGTCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGAC
TTAGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGCTGC
AGGAAGCCATATGATCGTGATCCTGCCGACAATGAGACAAACGTACATGGCGGCAGCCCAACATTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGTGGCAGG
GCAGGACATGGTTGCTGGAAGACAGTTCCTCCTAGTTTCTGTAAATTGTTTTTGTTCCTTCTCAGGAATAAAGTTCACTATCTAAGCTTGTACATCAACTATGGG
ATTTCTATTAATTCTCTGTGTGTATTTTGGGCTCACTTTCACATTTCTGTAATTACGAAGGACAATCCTGTGGAATGGAGGCTAACTGGTATTTATCTCCATGAA
CGAGGCCGCTGCCCCTCAGCACAGGTGGTTGGCTGTTTCTGTCAGAGTTTGCAAGGTTAG
Protein sequenceShow/hide protein sequence
MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVDENDRSVHHHSDFSDSPS
NSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSRNELGVGDGDS
GVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGC
RKPYDRDPADNETNVHGGSPTFPLARSCSMISSGRAGHGCWKTVPPSFCKLFLFLLRNKVHYLSLYINYGISINSLCVFWAHFHISVITKDNPVEWRLTGIYLHE
RGRCPSAQVVGCFCQSLQG