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CaUC07G126580 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC07G126580
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionZinc finger
Genome locationCiama_Chr07:1826530..1828247
RNA-Seq ExpressionCaUC07G126580
SyntenyCaUC07G126580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2618594.1 unnamed protein product [Spirodela intermedia]7.6e-0646.25Show/hide
Query:  IPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFAYIIIRALHT
        +PAWLQA  TPMKVT SG  P F+I S  + AS   PC A P I  VHE         K L A  M PH A     AL +
Subjt:  IPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFAYIIIRALHT

GER27977.1 zinc finger [Striga asiatica]3.3e-1764.63Show/hide
Query:  PAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFAYIIIRALHTMDI
        PAWL A RTPMKVTESG +P   I SNNSMAS L PCSAYPLIIAVHE  SSF  S K   AS M PHF Y+ +R L  M +
Subjt:  PAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFAYIIIRALHTMDI

KAB8081357.1 hypothetical protein EE612_002505 [Oryza sativa]8.9e-0752.05Show/hide
Query:  STIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFA
        ST PAWLQA RT + V   GL P+  I  NNS A + CPC A P IIA HE T       K   AS+MLPH A
Subjt:  STIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFA

KAF7806299.1 basic leucine zipper 43-like [Senna tora]3.1e-0746.84Show/hide
Query:  TIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFAYIIIRAL
        T PAWL A+++P+ V ESGL P   I SNNS+AS  CP   YP II  H+ +S      K L  S+M P FAY+ I+ +
Subjt:  TIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFAYIIIRAL

KAF7822208.1 protein TIFY 6B-like isoform X2 [Senna tora]3.4e-0637.59Show/hide
Query:  PLAAKMFAKNFSSSTLSTINITMDSTCSQQSRPDNIVPLKWHASDQPLCIMSTI---PAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLI
        P A K     F       +  T     +++S P+        + D    I ST    PAWLQA RT  K   SGL P   I S    A   CP   YP I
Subjt:  PLAAKMFAKNFSSSTLSTINITMDSTCSQQSRPDNIVPLKWHASDQPLCIMSTI---PAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLI

Query:  IAVHEITSSFNESIKILEASAMLPHFAYIIIRA
        IAVHE+T       KI  A   LPH AYI+IRA
Subjt:  IAVHEITSSFNESIKILEASAMLPHFAYIIIRA

TrEMBL top hitse value%identityAlignment
A0A0A8XY13 Uncharacterized protein1.1e-0750.65Show/hide
Query:  LCIMSTIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFA
        L   ST PAWLQA RT + V   G  P+  I  NNS A + CPC A P IIA HE T       K + AS+MLPHFA
Subjt:  LCIMSTIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFA

A0A0A9Q9J2 Uncharacterized protein1.1e-0750.65Show/hide
Query:  LCIMSTIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFA
        L   ST PAWLQA RT + V   G  P+  I  NNS A + CPC A P IIA HE T       K + AS+MLPHFA
Subjt:  LCIMSTIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFA

A0A0A9U3C2 Uncharacterized protein1.8e-0851.95Show/hide
Query:  LCIMSTIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFA
        L   ST PAWLQA RT +KV   G  P+  I  NNS A + CPC A P IIA HE T       K + AS+MLPHFA
Subjt:  LCIMSTIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFA

A0A0P0V2A9 Os01g0355175 protein4.3e-0752.05Show/hide
Query:  STIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFA
        ST PAWLQA RT + V   GL P+  I  NNS A + CPC A P IIA HE T       K   AS+MLPH A
Subjt:  STIPAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFA

A0A5A7P5L8 Zinc finger1.6e-1764.63Show/hide
Query:  PAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFAYIIIRALHTMDI
        PAWL A RTPMKVTESG +P   I SNNSMAS L PCSAYPLIIAVHE  SSF  S K   AS M PHF Y+ +R L  M +
Subjt:  PAWLQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFAYIIIRALHTMDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCCTTGTGGATGCGAACGATCTCCAGCAACAAATGCAAAAACACTATCCTTGACCTTTATCGAAGACCATCCTGGCTCCTTAACCACCCCCTTTGAT
TTCATTAACATTCGAATATTTGCTGCTTCCTTCCACTTTCCCTTAGCAGCAAAAATGTTTGCTAAGAACTTCAGCAGCAGCACGTTGTCCACAATCAACATCACC
ATGGACTCTACATGCTCTCAGCAAAGTAGACCAGACAACATCGTCCCGTTGAAATGGCATGCTTCTGATCAACCTCTCTGCATCATGTCAACCATTCCTGCATGG
CTACAAGCAGTAAGGACGCCAATGAAGGTCACGGAGTCTGGTCTCAAACCAACCTTTTGGATATTTTCAAACAATTCAATGGCTTCCTGGCTATGTCCATGTTCA
GCATACCCGCTAATCATTGCTGTCCATGAAATTACGTCATCTTTCAATGAATCCATAAAGATCTTAGAAGCTTCCGCTATGCTCCCACATTTTGCATACATAATA
ATAAGAGCACTACATACCATGGATATACTCAAAAGCTTCTTCACCATAGCCTACTTGAGAATATGCTGCAATTATAGTGCTCCAACACTGGCCTTCAATGCTATA
GCATATGCATACGAGTCATATTCGATCTTCGACCTTCCCATTAAAGAAAACCCGTCCCCACTATACCCTGCACGAACAAGCCCAGTTATAACTGCTGTCCAAGTC
ACCGCATTTTTTGTCTGCATTTCATCGAACACTTCACGACTTCTCCCAATTTCTCCAATTTTCATATACATGTCGAGAAGAGCACTACCGACGAAAACGGAGTTG
ACTAGACCTGTTTTGACCGAAAGCCCATGCAAGTTTGTACCA
mRNA sequenceShow/hide mRNA sequence
TTACTAAATGGTCCAATTCAAGAATAAAGATCTCCGTTCCTGAAACCAACTCCTCCAACATACTGTATATGTCTTCTCCTTGTGGATGCGAACGATCTCCAGCAA
CAAATGCAAAAACACTATCCTTGACCTTTATCGAAGACCATCCTGGCTCCTTAACCACCCCCTTTGATTTCATTAACATTCGAATATTTGCTGCTTCCTTCCACT
TTCCCTTAGCAGCAAAAATGTTTGCTAAGAACTTCAGCAGCAGCACGTTGTCCACAATCAACATCACCATGGACTCTACATGCTCTCAGCAAAGTAGACCAGACA
ACATCGTCCCGTTGAAATGGCATGCTTCTGATCAACCTCTCTGCATCATGTCAACCATTCCTGCATGGCTACAAGCAGTAAGGACGCCAATGAAGGTCACGGAGT
CTGGTCTCAAACCAACCTTTTGGATATTTTCAAACAATTCAATGGCTTCCTGGCTATGTCCATGTTCAGCATACCCGCTAATCATTGCTGTCCATGAAATTACGT
CATCTTTCAATGAATCCATAAAGATCTTAGAAGCTTCCGCTATGCTCCCACATTTTGCATACATAATAATAAGAGCACTACATACCATGGATATACTCAAAAGCT
TCTTCACCATAGCCTACTTGAGAATATGCTGCAATTATAGTGCTCCAACACTGGCCTTCAATGCTATAGCATATGCATACGAGTCATATTCGATCTTCGACCTTC
CCATTAAAGAAAACCCGTCCCCACTATACCCTGCACGAACAAGCCCAGTTATAACTGCTGTCCAAGTCACCGCATTTTTTGTCTGCATTTCATCGAACACTTCAC
GACTTCTCCCAATTTCTCCAATTTTCATATACATGTCGAGAAGAGCACTACCGACGAAAACGGAGTTGACTAGACCTGTTTTGACCGAAAGCCCATGCAAGTTTG
TACCA
Protein sequenceShow/hide protein sequence
MSSPCGCERSPATNAKTLSLTFIEDHPGSLTTPFDFINIRIFAASFHFPLAAKMFAKNFSSSTLSTINITMDSTCSQQSRPDNIVPLKWHASDQPLCIMSTIPAW
LQAVRTPMKVTESGLKPTFWIFSNNSMASWLCPCSAYPLIIAVHEITSSFNESIKILEASAMLPHFAYIIIRALHTMDILKSFFTIAYLRICCNYSAPTLAFNAI
AYAYESYSIFDLPIKENPSPLYPARTSPVITAVQVTAFFVCISSNTSRLLPISPIFIYMSRRALPTKTELTRPVLTESPCKFVP