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CaUC08G144140 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC08G144140
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr08:11320497..11322486
RNA-Seq ExpressionCaUC08G144140
SyntenyCaUC08G144140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057401.1 hypothetical protein E6C27_scaffold280G002750 [Cucumis melo var. makuwa]8.0e-0534.82Show/hide
Query:  ISSDKNTLVPAVRKRS-NLFKPFPKHFIKGKTTFLNSWSALMNSDLVEDNCVNVQIP---QQKSISSTQ-------------------FKSRKKPQDSDE
        +  DK      V KR+  LFKPF K F + +T+F NSW+ + N DL+E+ CV +Q+P   Q KS+ S+                     +  + P DS+E
Subjt:  ISSDKNTLVPAVRKRS-NLFKPFPKHFIKGKTTFLNSWSALMNSDLVEDNCVNVQIP---QQKSISSTQ-------------------FKSRKKPQDSDE

Query:  ESIFRTSSDELE
        ES+   SS++LE
Subjt:  ESIFRTSSDELE
XP_038887514.1 RNA-binding protein 39-like isoform X1 [Benincasa hispida]6.5e-0763.64Show/hide
Query:  RKRSNLFKPFPKHFIKGKTTFLNSWSALMNSDLVEDNCVNVQIP
        +K S L KPFP+HFI+ KT+F NSW+ L NSDL+E+ CV VQIP
Subjt:  RKRSNLFKPFPKHFIKGKTTFLNSWSALMNSDLVEDNCVNVQIP
TrEMBL top hitse value%identityAlignment
A0A0A0KHK4 Uncharacterized protein2.0e-0628.74Show/hide
Query:  KENFVGRRNDVLEIKKTPDIPSGKYSRTAGSTCQKTKSNPRFWNDINE-------SLENFEEAEESPPSSPNSKQE-DHSIQTLLAIPPQPQASKISSDK
        K+    + + V  I  +  +P+   + T+ ST     S P      NE       S EN       PPS   SK +  H +  ++++    + +K +S K
Subjt:  KENFVGRRNDVLEIKKTPDIPSGKYSRTAGSTCQKTKSNPRFWNDINE-------SLENFEEAEESPPSSPNSKQE-DHSIQTLLAIPPQPQASKISSDK

Query:  NTLVPAVRKRSNLFKPFPKHFIKGKTTFLNSWSALMNSDLVEDNCVNVQIPQQKSISSTQFKSRKKP
               ++ SNLFK F KHF + KT+F NSW+ + N D++E +CV +Q+P  +   S       KP
Subjt:  NTLVPAVRKRSNLFKPFPKHFIKGKTTFLNSWSALMNSDLVEDNCVNVQIPQQKSISSTQFKSRKKP
A0A5A7UV76 Uncharacterized protein3.9e-0534.82Show/hide
Query:  ISSDKNTLVPAVRKRS-NLFKPFPKHFIKGKTTFLNSWSALMNSDLVEDNCVNVQIP---QQKSISSTQ-------------------FKSRKKPQDSDE
        +  DK      V KR+  LFKPF K F + +T+F NSW+ + N DL+E+ CV +Q+P   Q KS+ S+                     +  + P DS+E
Subjt:  ISSDKNTLVPAVRKRS-NLFKPFPKHFIKGKTTFLNSWSALMNSDLVEDNCVNVQIP---QQKSISSTQ-------------------FKSRKKPQDSDE

Query:  ESIFRTSSDELE
        ES+   SS++LE
Subjt:  ESIFRTSSDELE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGACAGCAAATTTCCACGAAGGAAAATTTCATAATGTGAACGCGCCAAAGTCGAGCCAGTTAGAGGAAAATGAAAAGTCACAAATAGACACAAGGCCAAAAGT
TGTAAGTTCGGAAGTAATGAAGAAAGAGAATTTTGTCGGTCGAAGGAATGATGTCCTCGAAATCAAGAAGACCCCTGATATTCCTTCTGGGAAATACTCTCGAACAGCAG
GGTCCACCTGCCAAAAAACTAAATCTAACCCGAGATTCTGGAACGACATAAATGAATCGTTGGAGAACTTTGAAGAAGCGGAAGAGTCTCCCCCTAGTAGTCCGAATTCC
AAACAGGAAGATCACTCAATTCAGACTTTACTAGCCATTCCTCCTCAACCTCAAGCAAGCAAGATTTCCTCTGATAAGAATACATTGGTCCCAGCAGTTAGAAAGAGATC
CAACCTCTTCAAGCCCTTCCCAAAGCACTTCATCAAAGGAAAAACAACATTTCTAAACTCATGGTCAGCCCTGATGAATTCCGACTTAGTTGAAGATAATTGTGTGAATG
TTCAAATTCCCCAACAGAAATCCATCAGCTCCACCCAATTCAAATCAAGAAAGAAGCCCCAGGATTCAGATGAGGAATCAATCTTCCGCACAAGCAGTGATGAACTAGAA
GGCCTTGAAAGGAGGAGATTCATAGAGAAGTCGGGGCTTTTGAATGGGGACGTTCTCCATTTCGTTTTTGCAACAACTGGTTGCTTAATTCTCAATGCTGCAACATCATT
GAAAGATCTCTTGCTACGGGGAATCACCAAGGATGGGGTGGATTCATCATTTCTTCTAAGTTGCGCTCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGACAGCAAATTTCCACGAAGGAAAATTTCATAATGTGAACGCGCCAAAGTCGAGCCAGTTAGAGGAAAATGAAAAGTCACAAATAGACACAAGGCCAAAAGT
TGTAAGTTCGGAAGTAATGAAGAAAGAGAATTTTGTCGGTCGAAGGAATGATGTCCTCGAAATCAAGAAGACCCCTGATATTCCTTCTGGGAAATACTCTCGAACAGCAG
GGTCCACCTGCCAAAAAACTAAATCTAACCCGAGATTCTGGAACGACATAAATGAATCGTTGGAGAACTTTGAAGAAGCGGAAGAGTCTCCCCCTAGTAGTCCGAATTCC
AAACAGGAAGATCACTCAATTCAGACTTTACTAGCCATTCCTCCTCAACCTCAAGCAAGCAAGATTTCCTCTGATAAGAATACATTGGTCCCAGCAGTTAGAAAGAGATC
CAACCTCTTCAAGCCCTTCCCAAAGCACTTCATCAAAGGAAAAACAACATTTCTAAACTCATGGTCAGCCCTGATGAATTCCGACTTAGTTGAAGATAATTGTGTGAATG
TTCAAATTCCCCAACAGAAATCCATCAGCTCCACCCAATTCAAATCAAGAAAGAAGCCCCAGGATTCAGATGAGGAATCAATCTTCCGCACAAGCAGTGATGAACTAGAA
GGCCTTGAAAGGAGGAGATTCATAGAGAAGTCGGGGCTTTTGAATGGGGACGTTCTCCATTTCGTTTTTGCAACAACTGGTTGCTTAATTCTCAATGCTGCAACATCATT
GAAAGATCTCTTGCTACGGGGAATCACCAAGGATGGGGTGGATTCATCATTTCTTCTAAGTTGCGCTCAGTAA
Protein sequenceShow/hide protein sequence
MEKTANFHEGKFHNVNAPKSSQLEENEKSQIDTRPKVVSSEVMKKENFVGRRNDVLEIKKTPDIPSGKYSRTAGSTCQKTKSNPRFWNDINESLENFEEAEESPPSSPNS
KQEDHSIQTLLAIPPQPQASKISSDKNTLVPAVRKRSNLFKPFPKHFIKGKTTFLNSWSALMNSDLVEDNCVNVQIPQQKSISSTQFKSRKKPQDSDEESIFRTSSDELE
GLERRRFIEKSGLLNGDVLHFVFATTGCLILNAATSLKDLLLRGITKDGVDSSFLLSCAQ