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CaUC08G146190 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC08G146190
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr08:17217904..17218487
RNA-Seq ExpressionCaUC08G146190
SyntenyCaUC08G146190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578905.1 hypothetical protein SDJN03_23353, partial [Cucurbita argyrosperma subsp. sororia]7.0e-1450.43Show/hide
Query:  YLDSLGRLLVSSVRFSLCSVTGGLEDLTVSLLRSHLCLLRNRFGGYISVFASHSKSLSRGHEDVFDSVFRMEFLGLWLRRSDRSTRLLGKDEGKGAAKFC
        Y+ SL RLLVSSV FSLCSV+G LEDL++S + S L             FA  +  LS         ++R   L L  +  DRSTRL GKDEG+GA KFC
Subjt:  YLDSLGRLLVSSVRFSLCSVTGGLEDLTVSLLRSHLCLLRNRFGGYISVFASHSKSLSRGHEDVFDSVFRMEFLGLWLRRSDRSTRLLGKDEGKGAAKFC

Query:  FCLSVVSFREREREEAL
         CLSVV FRERE E+ L
Subjt:  FCLSVVSFREREREEAL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTATATTTGGATTCTCTCGGAAGACTCCTTGTCTCCTCCGTCCGGTTCTCGCTTTGTTCCGTCACCGGCGGCCTTGAGGACTTGACGGTTTCATTGTTGCGAAG
CCATCTTTGCTTGCTGAGAAACCGCTTTGGAGGCTATATTTCTGTTTTTGCTTCTCATTCTAAGAGTTTAAGCCGAGGACATGAGGATGTTTTTGATTCAGTGTTTCGAA
TGGAGTTTCTAGGACTTTGGCTTCGAAGGAGTGACAGATCTACACGGCTTTTGGGGAAGGACGAGGGGAAGGGAGCTGCGAAATTTTGTTTTTGTTTGTCAGTAGTGAGT
TTTAGAGAAAGAGAGAGAGAGGAAGCTCTGCGGTGGGCC
mRNA sequenceShow/hide mRNA sequence
AATATATGGATTTATATTTGGATTCTCTCGGAAGACTCCTTGTCTCCTCCGTCCGGTTCTCGCTTTGTTCCGTCACCGGCGGCCTTGAGGACTTGACGGTTTCATTGTTG
CGAAGCCATCTTTGCTTGCTGAGAAACCGCTTTGGAGGCTATATTTCTGTTTTTGCTTCTCATTCTAAGAGTTTAAGCCGAGGACATGAGGATGTTTTTGATTCAGTGTT
TCGAATGGAGTTTCTAGGACTTTGGCTTCGAAGGAGTGACAGATCTACACGGCTTTTGGGGAAGGACGAGGGGAAGGGAGCTGCGAAATTTTGTTTTTGTTTGTCAGTAG
TGAGTTTTAGAGAAAGAGAGAGAGAGGAAGCTCTGCGGTGGGCC
Protein sequenceShow/hide protein sequence
MDLYLDSLGRLLVSSVRFSLCSVTGGLEDLTVSLLRSHLCLLRNRFGGYISVFASHSKSLSRGHEDVFDSVFRMEFLGLWLRRSDRSTRLLGKDEGKGAAKFCFCLSVVS
FREREREEALRWA