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CaUC09G159630 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC09G159630
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRop guanine nucleotide exchange factor-like protein
Genome locationCiama_Chr09:1886914..1890602
RNA-Seq ExpressionCaUC09G159630
SyntenyCaUC09G159630
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0009522 - photosystem I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ11788.1 rop guanine nucleotide exchange factor-like protein [Actinidia rufa]1.4e-1666.67Show/hide
Query:  NRCLSISKMVSALSSNSSLFSKLTAEPQADFPSFWFIFLLQITMEASILSLRSRILCSD--PYSDAENRGKNFPKATI
        NRCL +SKMVSALSSNSSLFSKLT EPQADFPS  FIFL  IT +ASIL +RSRILCSD  PY+  + R  + P   +
Subjt:  NRCLSISKMVSALSSNSSLFSKLTAEPQADFPSFWFIFLLQITMEASILSLRSRILCSD--PYSDAENRGKNFPKATI
RYQ87373.1 hypothetical protein Ahy_B09g094881 isoform A [Arachis hypogaea]7.2e-0857.38Show/hide
Query:  SLFSKLTAEPQADFPSFWFIFLLQITMEASILSLRSRILCSDPYSDAENRGKNFPKATILV
        S+F  LTAE Q DF SFWFIFLLQIT+EASIL  RSRILCSD  S  +        +T+++
Subjt:  SLFSKLTAEPQADFPSFWFIFLLQITMEASILSLRSRILCSDPYSDAENRGKNFPKATILV
TrEMBL top hitse value%identityAlignment
A0A444XD22 Uncharacterized protein3.5e-0857.38Show/hide
Query:  SLFSKLTAEPQADFPSFWFIFLLQITMEASILSLRSRILCSDPYSDAENRGKNFPKATILV
        S+F  LTAE Q DF SFWFIFLLQIT+EASIL  RSRILCSD  S  +        +T+++
Subjt:  SLFSKLTAEPQADFPSFWFIFLLQITMEASILSLRSRILCSDPYSDAENRGKNFPKATILV
A0A7J0GM27 Rop guanine nucleotide exchange factor-like protein7.0e-1766.67Show/hide
Query:  NRCLSISKMVSALSSNSSLFSKLTAEPQADFPSFWFIFLLQITMEASILSLRSRILCSD--PYSDAENRGKNFPKATI
        NRCL +SKMVSALSSNSSLFSKLT EPQADFPS  FIFL  IT +ASIL +RSRILCSD  PY+  + R  + P   +
Subjt:  NRCLSISKMVSALSSNSSLFSKLTAEPQADFPSFWFIFLLQITMEASILSLRSRILCSD--PYSDAENRGKNFPKATI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAAAGATATTTCTCAATTTTCCCTCCCTATCATCTCTCTATCTATTCTTCTTCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAT
GGCGCGCCGTTGGACTTCTCACAGCGCTCAAATTCTCCAGCGTCATTGAAGCCGGCGTTTCTGGCCCGTTGTTGTTCAACTCTTCTGACTTTTCCGCCGGAGTTT
CGCACGTCGGTTTCCTCTTTGTTGCTATTTGTGACGGATTCTGAGTTAACCCATCCGCGTGGAGCACATTGTGGGATTCCAGGGAATCGGTGCTTAAGTATTAGC
AAGATGGTCTCTGCTCTCTCTTCAAATAGTTCTCTCTTTTCCAAACTCACTGCTGAACCCCAAGCAGATTTTCCATCTTTCTGGTTCATCTTCCTCCTCCAAATC
ACTATGGAGGCTTCAATTCTGTCTTTGAGATCTAGGATTTTATGCTCTGATCCGTATTCTGATGCCGAAAACCGTGGGAAAAATTTCCCCAAGGCTACCATCTTG
GTGTTTCTCAGCAGAGTTGTGAACTGGTGTCGATCCCTGGCTTTTGGATGTCGACAAATCATCTTCGATGACAGATTCCAACATGCTGGCACTCTCCACACTCAA
GCTCTTGGCATGTCTGCCTGCATTCTCATGCGTTCCTCTGAAATGAAAGAATCTGGACCTGAAACCTTCGTGCTCCTGCTCCATAGCACGAACCATTCTCAGTTT
TTTGATGAAACTACTTCCAATTGGATGGTTCAGCTCAAACTTTGC
mRNA sequenceShow/hide mRNA sequence
GGAAAAGATATTTCTCAATTTTCCCTCCCTATCATCTCTCTATCTATTCTTCTTCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAT
GGCGCGCCGTTGGACTTCTCACAGCGCTCAAATTCTCCAGCGTCATTGAAGCCGGCGTTTCTGGCCCGTTGTTGTTCAACTCTTCTGACTTTTCCGCCGGAGTTT
CGCACGTCGGTTTCCTCTTTGTTGCTATTTGTGACGGATTCTGAGTTAACCCATCCGCGTGGAGCACATTGTGGGATTCCAGGGAATCGGTGCTTAAGTATTAGC
AAGATGGTCTCTGCTCTCTCTTCAAATAGTTCTCTCTTTTCCAAACTCACTGCTGAACCCCAAGCAGATTTTCCATCTTTCTGGTTCATCTTCCTCCTCCAAATC
ACTATGGAGGCTTCAATTCTGTCTTTGAGATCTAGGATTTTATGCTCTGATCCGTATTCTGATGCCGAAAACCGTGGGAAAAATTTCCCCAAGGCTACCATCTTG
GTGTTTCTCAGCAGAGTTGTGAACTGGTGTCGATCCCTGGCTTTTGGATGTCGACAAATCATCTTCGATGACAGATTCCAACATGCTGGCACTCTCCACACTCAA
GCTCTTGGCATGTCTGCCTGCATTCTCATGCGTTCCTCTGAAATGAAAGAATCTGGACCTGAAACCTTCGTGCTCCTGCTCCATAGCACGAACCATTCTCAGTTT
TTTGATGAAACTACTTCCAATTGGATGGTTCAGCTCAAACTTTGC
Protein sequenceShow/hide protein sequence
GKDISQFSLPIISLSILLLFFFFFFFFFFFFFFFNGAPLDFSQRSNSPASLKPAFLARCCSTLLTFPPEFRTSVSSLLLFVTDSELTHPRGAHCGIPGNRCLSIS
KMVSALSSNSSLFSKLTAEPQADFPSFWFIFLLQITMEASILSLRSRILCSDPYSDAENRGKNFPKATILVFLSRVVNWCRSLAFGCRQIIFDDRFQHAGTLHTQ
ALGMSACILMRSSEMKESGPETFVLLLHSTNHSQFFDETTSNWMVQLKLC