; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC09G159690 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC09G159690
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description60S ribosomal protein L37
Genome locationCiama_Chr09:1928128..1929420
RNA-Seq ExpressionCaUC09G159690
SyntenyCaUC09G159690
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011331 - Ribosomal protein L37ae/L37e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3489293.1 60S ribosomal protein L37-3 [Gossypium australe]3.3e-2360.33Show/hide
Query:  RERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF
        RER + VLV+ GTRP LS   VAA ASISRR    PVLSLLL                            +V+NWSVKAIRRKTTGTGRMRYLR+VPRRF
Subjt:  RERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF

Query:  KSGFREGTEAAPRNKGAAASA
        K+GFREGTEAAPR K AAASA
Subjt:  KSGFREGTEAAPRNKGAAASA

KAB1218567.1 60S ribosomal protein L37 [Morella rubra]1.3e-2261.29Show/hide
Query:  LIYRERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVP
        LI R R +  LVRGGTRP     GVAAAASISRRVA  PV   L A                 N    W   V   NWSVKAIRRKTTGTGRMRYLR++P
Subjt:  LIYRERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVP

Query:  RRFKSGFREGTEAAPRNKGAAASA
        RRFKSGFREGTEAAPR KGAAA+A
Subjt:  RRFKSGFREGTEAAPRNKGAAASA

KAG7025798.1 60S ribosomal protein L37-2, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-3372Show/hide
Query:  RLIYRERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNV
        RLIYR RVR VLVRGGTRPILSVCG AAAASISRRV VQ VLSLL ASEN                           NWSVKAIRRKTTGTGRMRY+R+V
Subjt:  RLIYRERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNV

Query:  PRRFKSGFREGTEAAPRNKGAAASA
        PRRFKSGFREGTEAAPRNKGAAASA
Subjt:  PRRFKSGFREGTEAAPRNKGAAASA

PPD83667.1 hypothetical protein GOBAR_DD19392 [Gossypium barbadense]1.5e-2364.46Show/hide
Query:  RERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF
        RER + VLV+ GTRP LS  GV A ASISRRV   PVLSLLL+           L L  F  +LLW    +  NWSVKA RRKTTGTGRMRYL +VPRRF
Subjt:  RERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF

Query:  KSGFREGTEAAPRNKGAAASA
        K+GFREGTEAAPRNK AAASA
Subjt:  KSGFREGTEAAPRNKGAAASA

PPD93922.1 hypothetical protein GOBAR_DD09073 [Gossypium barbadense]2.1e-2261.74Show/hide
Query:  RERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF
        RER + VLV+ GTRP LS  GVAA ASISR     PVLSLLL           G  L     +LLW    +  NWSVKAIRRKTTGTG+MRYLR+VPRRF
Subjt:  RERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF

Query:  KSGFREGTEAAPRNK
        K+GFREGTEAAPR K
Subjt:  KSGFREGTEAAPRNK

TrEMBL top hitse value%identityAlignment
A0A2P5XZ09 Uncharacterized protein9.1e-1955.26Show/hide
Query:  LVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREG
        L R GTR ILS   V   ASIS+R     V  L  ASEN++L+  + + +F F         +++ NWS+KAIRRKTTGTGRMRYLR+VPRRFK+GFREG
Subjt:  LVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREG

Query:  TEAAPRNKGAAASA
        TEAAPR K A A++
Subjt:  TEAAPRNKGAAASA

A0A5B6X6B2 60S ribosomal protein L37-31.6e-2360.33Show/hide
Query:  RERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF
        RER + VLV+ GTRP LS   VAA ASISRR    PVLSLLL                            +V+NWSVKAIRRKTTGTGRMRYLR+VPRRF
Subjt:  RERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF

Query:  KSGFREGTEAAPRNKGAAASA
        K+GFREGTEAAPR K AAASA
Subjt:  KSGFREGTEAAPRNKGAAASA

A0A5C7IJ18 Uncharacterized protein1.9e-2155.47Show/hide
Query:  YCWFQLCIFVRLIYRERVRAVLVRGGTRPILSVCGVAAAASISRRV-AVQPVLSLLLASENID-LNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKT
        YC+    I     YRER + VLVRGGTR  L V   A AASI RRV A+   + LL     I+ +N   G  +               +NWSVKAIRRKT
Subjt:  YCWFQLCIFVRLIYRERVRAVLVRGGTRPILSVCGVAAAASISRRV-AVQPVLSLLLASENID-LNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKT

Query:  TGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        TGTGRM+YLRNVPRRFKSGFREGTEAAPR KGAAA+A
Subjt:  TGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

A0A6A1W379 60S ribosomal protein L376.1e-2361.29Show/hide
Query:  LIYRERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVP
        LI R R +  LVRGGTRP     GVAAAASISRRVA  PV   L A                 N    W   V   NWSVKAIRRKTTGTGRMRYLR++P
Subjt:  LIYRERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVP

Query:  RRFKSGFREGTEAAPRNKGAAASA
        RRFKSGFREGTEAAPR KGAAA+A
Subjt:  RRFKSGFREGTEAAPRNKGAAASA

A0A7J7G630 Uncharacterized protein3.1e-1956.56Show/hide
Query:  YRERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRR
        +RE+ R    RGGTR   S   VAA A ISRRV    V   LLA  ++ +++          A +L        NWSVKAIRRKTTGTGRMRYLRNVPRR
Subjt:  YRERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRR

Query:  FKSGFREGTEAAPRNKGAAASA
        FKSGFREGTEAAPR KGAAA++
Subjt:  FKSGFREGTEAAPRNKGAAASA

SwissProt top hitse value%identityAlignment
P49212 60S ribosomal protein L37 (Fragment)1.8e-1683.67Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        +NWSVKA+RRKTTGTGRMRYLRNVPRRFK+ FREGTEAAPR KG AA++
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

Q43292 60S ribosomal protein L37-27.4e-1889.8Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFREGTEA PRNKG A+SA
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

Q8LEM8 60S ribosomal protein L37-31.1e-1685.71Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFREGTEA PR+K +A+SA
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

Q8LFH7 60S ribosomal protein L37-15.3e-1683.67Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+ FREGT+A PRNK AA+S+
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

Q9VXX8 Probable 60S ribosomal protein L37-A2.2e-0965.22Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAA
        +NWSVKA RRKTTGTGRM++L+ V RRF++GFREGT+A P+   A+
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAA

Arabidopsis top hitse value%identityAlignment
AT1G15250.1 Zinc-binding ribosomal protein family protein3.8e-1783.67Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+ FREGT+A PRNK AA+S+
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

AT1G52300.1 Zinc-binding ribosomal protein family protein5.2e-1989.8Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFREGTEA PRNKG A+SA
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

AT3G16080.1 Zinc-binding ribosomal protein family protein7.6e-1885.71Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFREGTEA PR+K +A+SA
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCGATTTATGCTTCCATATTGTTGGTTTCAACTCTGTATTTTCGTTCGGTTAATCTACAGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAACAAGA
CCCATACTCTCTGTGTGCGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGCTGTGCAGCCTGTGCTTTCCCTGCTGCTCGCAAGCGAAAATATTGATCTT
AATCGGCTGTTCGGCCTGTGTTTATTTTCATTCAATGCGTCGCTGCTTTGGATTTGTTTAGTGAACGTTCATAACTGGAGTGTGAAGGCAATTAGGAGAAAGACA
ACTGGAACTGGAAGAATGAGGTACTTGCGCAATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGAGGGTACTGAAGCTGCACCCAGGAATAAAGGAGCAGCAGCA
TCAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTATCGATTTATGCTTCCATATTGTTGGTTTCAACTCTGTATTTTCGTTCGGTTAATCTACAGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAACAAGA
CCCATACTCTCTGTGTGCGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGCTGTGCAGCCTGTGCTTTCCCTGCTGCTCGCAAGCGAAAATATTGATCTT
AATCGGCTGTTCGGCCTGTGTTTATTTTCATTCAATGCGTCGCTGCTTTGGATTTGTTTAGTGAACGTTCATAACTGGAGTGTGAAGGCAATTAGGAGAAAGACA
ACTGGAACTGGAAGAATGAGGTACTTGCGCAATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGAGGGTACTGAAGCTGCACCCAGGAATAAAGGAGCAGCAGCA
TCAGCATAAGTTTTTTGGAAGAAGTTCGACTTAATTTCAGTACCCAACTATAGTTTTCAGTAGGGTTTTTACTCATCTGAGAATCATTTCATATAATTTTGTTTT
CTAGTTTTGCCTTTTCATGATTTAGTTGGACGTGGTTTCCTTAAAATGTATTGTTTGAATTTTGGACAAATGATGAATCAGATTTTTCGTATTCTGCTACTTGTT
TATGCATTTAAGCAAACGATATGGTTTTCAGTATCGAATATTAGAATCTGTTTTCCCACAGGGAATCCCTGCTTGAAATGATAAATTTGCTTGCAGTTTTCACCA
TAGCCCATGCCATCATCAACCGGCGTAAAAATAATCTCTTCTTTCTCCTAAACTTAAGCCATTGATCATGTTCATTACAGTGATCAACAATTCTTACAGTTTCTT
CCCATCATCAAACTTTCTTTTGCTGTATTTGAATTGAACGTGAAAGCACCCTTGGAGTTGGTAGTTTTAGTTTTAACAAAAGGCACGTGAAATTTTAATTTGGC
Protein sequenceShow/hide protein sequence
MYRFMLPYCWFQLCIFVRLIYRERVRAVLVRGGTRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKT
TGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA