CuGenDBv2

Gene ID	CaUC09G163680
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Nucleolar protein 16
Genome location	Ciama_Chr09:5319261..5320964
RNA-Seq Expression	CaUC09G163680
Synteny	CaUC09G163680
Gene Ontology terms	GO:0042273 - ribosomal large subunit biogenesis (biological process) GO:0005730 - nucleolus (cellular component)
InterPro domains	IPR019002 - Ribosome biogenesis protein Nop16

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008451586.1 PREDICTED: uncharacterized protein LOC103492822 [Cucumis melo]

1.4e-93

91.75

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Query:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP
        MGRSRRKYK+SRPKVKVGLPKR+PNVFKPSFCMPPKLRSLLAEQFEEDPTWDEK SVI NYKSFGVISNPNLLSVRSRTDHIVESDSLQV    PPS++P
Subjt:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIRK
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTT+QRVHVG+LIEKYGDDY+RMFMDTKLNSMQHS ATLEKLCKRYHS LDKNPLIL RK
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIRK

XP_022954094.1 uncharacterized protein LOC111456462 [Cucurbita moschata]

1.1e-93

91.71

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Query:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP
        MGRSRRKYKRSR KV+VGLPKR+PNVFKPSFCMPPKLRSLLAEQFEEDP WDEKASVI NYKSFGV+SNPNLLSVRSRTDHIVESD LQVPPS PPS++P
Subjt:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIR
        DSVLDSSGSDVEEDDLKTALGKKR+DGKSAPL+PLTTIQRVHVGRLIEKYGDD+ERMFMDTKLNSMQHS ATLEKLCKRYHS LDKNPLIL R
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIR

XP_022991747.1 uncharacterized protein LOC111488281 [Cucurbita maxima]

9.9e-95

92.75

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Query:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP
        MGRSRRKYKRSR KV+VGLPKR+PNVFKPSFCMPPKLRSLLAEQFEEDP WDEKASVI NYKSFGV+SNPNLLSVRSRTDHIVESDSLQVPPS PPS++P
Subjt:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPL+PLTTIQRVHVGRLIEKYGDD+ERMFMDTKLNSMQHS ATLEKLCKRYHS LDKNPLIL R
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIR

XP_023547523.1 uncharacterized protein LOC111806441 [Cucurbita pepo subsp. pepo]

3.7e-94

92.23

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Query:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP
        MGRSRRKYKRSR KV+VGLPKR+PNVFKPSFCMPPKLRSLLAEQFEEDP WDEKASVI NYKSFGV+SNPNLLSVRSRTDHIVESDSLQVPPS PPS++P
Subjt:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPL+PLTTIQRVHVGRLIEKYGDD+ERMFMDTKLNSMQHS ATLEKLCKRYH  LDKNPLIL R
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIR

XP_038898931.1 nucleolar protein 16 [Benincasa hispida]

1.2e-100

96.92

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Query:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP
        MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWD+KA VI NYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPS+EP
Subjt:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIRKK
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHS ATLEKLCKRYHS LDKNPLILIRKK
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIRKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KAV9 Nucleolar protein 16

2.9e-92

89.74

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Query:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP
        MGRSRRKYK+SRPKVKVGLPKR+PNVFKPSFCMPPKLRSLLAEQFEEDPTWDEK SVI NYKSFGVISNPNLLSVRSRTDHIVESDSLQV    PPS++P
Subjt:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIRKK
        D+VLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTT+QRVHVG+LIEKYGDDY+RMFMDTKLNSMQHS ATLEKLCKRY+S LD NPLIL RK+
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIRKK

A0A1S3BSM4 Nucleolar protein 16

6.9e-94

91.75

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Query:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP
        MGRSRRKYK+SRPKVKVGLPKR+PNVFKPSFCMPPKLRSLLAEQFEEDPTWDEK SVI NYKSFGVISNPNLLSVRSRTDHIVESDSLQV    PPS++P
Subjt:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIRK
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTT+QRVHVG+LIEKYGDDY+RMFMDTKLNSMQHS ATLEKLCKRYHS LDKNPLIL RK
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIRK

A0A5A7VLA5 Nucleolar protein 16

6.9e-94

91.75

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Query:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP
        MGRSRRKYK+SRPKVKVGLPKR+PNVFKPSFCMPPKLRSLLAEQFEEDPTWDEK SVI NYKSFGVISNPNLLSVRSRTDHIVESDSLQV    PPS++P
Subjt:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIRK
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTT+QRVHVG+LIEKYGDDY+RMFMDTKLNSMQHS ATLEKLCKRYHS LDKNPLIL RK
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIRK

A0A6J1GRW5 Nucleolar protein 16

5.3e-94

91.71

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Query:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP
        MGRSRRKYKRSR KV+VGLPKR+PNVFKPSFCMPPKLRSLLAEQFEEDP WDEKASVI NYKSFGV+SNPNLLSVRSRTDHIVESD LQVPPS PPS++P
Subjt:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIR
        DSVLDSSGSDVEEDDLKTALGKKR+DGKSAPL+PLTTIQRVHVGRLIEKYGDD+ERMFMDTKLNSMQHS ATLEKLCKRYHS LDKNPLIL R
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIR

A0A6J1JMQ4 Nucleolar protein 16

4.8e-95

92.75

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Query:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP
        MGRSRRKYKRSR KV+VGLPKR+PNVFKPSFCMPPKLRSLLAEQFEEDP WDEKASVI NYKSFGV+SNPNLLSVRSRTDHIVESDSLQVPPS PPS++P
Subjt:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPL+PLTTIQRVHVGRLIEKYGDD+ERMFMDTKLNSMQHS ATLEKLCKRYHS LDKNPLIL R
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G02870.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome biogenesis protein Nop16 (InterPro:IPR019002); Has 104 Blast hits to 104 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

6.0e-66

63.08

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Query:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPS-QPPSNE
        M RSRRKY+ SR KV+V LPK++PN+FKP+F  PPKLR+L+    ++ P WD++ASVI NYKSFGVISNPNLL +R+RTDH+++ DSL VPP  +PP+++
Subjt:  MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPS-QPPSNE

Query:  P---DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLIL
        P   +     SGS++EEDDLKTALGK+RKDGKSAPLQPLTT+QR H+ RL+EK+GDD E M+ D KLNSMQHS ATL KLC RY  + DKNP+++
Subjt:  P---DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLIL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAAGGTCTCGAAGAAAGTACAAGAGATCTCGGCCAAAAGTCAAGGTCGGCTTGCCTAAAAGACACCCCAATGTCTTCAAGCCATCCTTCTGCATGCCGCCG
AAGCTCCGCTCCTTGCTCGCCGAACAATTTGAAGAGGATCCAACATGGGATGAGAAAGCAAGTGTTATTGACAACTACAAATCCTTCGGGGTTATTTCTAATCCT
AATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTTGAGAGCGACTCTCTCCAGGTTCCGCCTTCTCAGCCTCCTTCCAATGAACCTGACTCTGTGCTTGAT
TCTTCCGGTAGCGATGTTGAAGAGGATGATTTGAAAACAGCATTGGGAAAGAAGCGCAAAGATGGGAAATCTGCACCTCTACAACCGTTGACCACGATTCAGCGT
GTTCATGTCGGTAGGCTAATTGAGAAATATGGAGATGATTACGAGAGAATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGCTGCCACTCTGGAGAAA
CTATGCAAAAGATATCACAGTTTTTTAGATAAGAATCCATTGATATTGATTCGTAAAAAATGA

mRNA sequence

Show/hide mRNA sequence

CTCAGGACAAAAACCCTACGAAATCCCAACTGAGTTCTTCATCTTCCACATAGTAAAACCCTAGCCACCAGTTTTCGCCTTCTCCTTCCAATTCACAGAGCCATT
GAGAGAGATGGGAAGGTCTCGAAGAAAGTACAAGAGATCTCGGCCAAAAGTCAAGGTCGGCTTGCCTAAAAGACACCCCAATGTCTTCAAGCCATCCTTCTGCAT
GCCGCCGAAGCTCCGCTCCTTGCTCGCCGAACAATTTGAAGAGGATCCAACATGGGATGAGAAAGCAAGTGTTATTGACAACTACAAATCCTTCGGGGTTATTTC
TAATCCTAATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTTGAGAGCGACTCTCTCCAGGTTCCGCCTTCTCAGCCTCCTTCCAATGAACCTGACTCTGT
GCTTGATTCTTCCGGTAGCGATGTTGAAGAGGATGATTTGAAAACAGCATTGGGAAAGAAGCGCAAAGATGGGAAATCTGCACCTCTACAACCGTTGACCACGAT
TCAGCGTGTTCATGTCGGTAGGCTAATTGAGAAATATGGAGATGATTACGAGAGAATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGCTGCCACTCT
GGAGAAACTATGCAAAAGATATCACAGTTTTTTAGATAAGAATCCATTGATATTGATTCGTAAAAAATGAATGCTCCATCTTTCAAATTGTTTTGTAACAAGAGG
TGAAAACCCGTTTTGATCAATATTATAACAAAAGGTATGATCATGAAATCTTATTGAGCAATATTGTTTTGAATCCTTATGTATGAGCCCTTGAAAAATGAATCA
TTCTTCTTGCTTGCTGC

Protein sequence

Show/hide protein sequence

MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIDNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSNEPDSVLD
SSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSAATLEKLCKRYHSFLDKNPLILIRKK

CaUC09G163680 (gene) of Watermelon (USVL246-FR2) v1 genome