; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC09G166330 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC09G166330
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionS-protein homolog
Genome locationCiama_Chr09:8739827..8740297
RNA-Seq ExpressionCaUC09G166330
SyntenyCaUC09G166330
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143645.1 S-protein homolog 1-like [Momordica charantia]3.2e-4871.68Show/hide
Query:  LQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR
        L  WH+HVVNGL   TL VHCKSKDDDLG   LVT G EFQWTF++N W TTLYWC L KPNADVSF++FWVE+ H+WL YRC ++NC W AKDDGIYLR
Subjt:  LQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR

Query:  NNPDGVDEFVHKW
        NNPDGVDE +H+W
Subjt:  NNPDGVDEFVHKW

XP_022959899.1 S-protein homolog 1-like [Cucurbita moschata]2.8e-4760.78Show/hide
Query:  MGSSY--VRNMVYSVVLLGLV--LIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK
        M S+Y   R++  +  LLGL+   + QP   A G    +P+Q W VHVVN L NATL VHCKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L K
Subjt:  MGSSY--VRNMVYSVVLLGLV--LIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK

Query:  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW
        PNA VSF+AFW+EK HIWL+YRC   NC W A+DDG+YLRNNPD VDE VHKW
Subjt:  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW

XP_023004728.1 S-protein homolog 1-like [Cucurbita maxima]3.8e-4962.09Show/hide
Query:  MGSSYV--RNMVYSVVLLGLV--LIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK
        M S+Y+  R++  +  LLGL+   + QP   A G    +P+Q W VHVVN L NATL VHCKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L K
Subjt:  MGSSYV--RNMVYSVVLLGLV--LIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK

Query:  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW
        PNA VSF+AFW+EK HIWL+YRC  +NC W AKDDG+YLRNNPDGVDE VHKW
Subjt:  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW

XP_023514588.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]1.0e-4660.13Show/hide
Query:  MGSSY--VRNMVYSVVLLGLV--LIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK
        M S+Y   R++  +  LLGL+   + QP   A G    +P+Q W VHVVN L NATL VHCKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L K
Subjt:  MGSSY--VRNMVYSVVLLGLV--LIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK

Query:  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW
        PNA VSF+AFW+EK HIWL+YRC   NC W A++DG+YLRNNPD VDE VHKW
Subjt:  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW

XP_038896407.1 S-protein homolog 1-like [Benincasa hispida]1.6e-7989.54Show/hide
Query:  MGSSYVRNMVYSVVLLGLVLIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNAD
        MGSSY+R MV S+VLLGLVLIQQP LFAKGDPVPLPLQ WHVHVVNGLKNATL VHCKSKDDDLGPQ LV+NGAEFQW+FKINIWRTTLYWCSLHKPNAD
Subjt:  MGSSYVRNMVYSVVLLGLVLIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNAD

Query:  VSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKWGEVR
        VSFDAFWVE++HIWLHYRCMNQNCFW+AKDDGIYLRNNPD VDEFVHKW E R
Subjt:  VSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKWGEVR

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog2.1e-4560.71Show/hide
Query:  VVLLGLVLIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKH
        +VL+ +VL+Q          VPLPL  WH+HVVNGL+N TL VHCKSKDDDLG  TL T G E QWTFK+N + TTL+WC L KPN  V+F++FWVEK H
Subjt:  VVLLGLVLIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKH

Query:  IWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKWGEV
         WL  RC ++NC WIAKDDGIYLRNN   VDE VH W ++
Subjt:  IWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKWGEV

A0A6J1CPC6 S-protein homolog1.6e-4871.68Show/hide
Query:  LQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR
        L  WH+HVVNGL   TL VHCKSKDDDLG   LVT G EFQWTF++N W TTLYWC L KPNADVSF++FWVE+ H+WL YRC ++NC W AKDDGIYLR
Subjt:  LQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR

Query:  NNPDGVDEFVHKW
        NNPDGVDE +H+W
Subjt:  NNPDGVDEFVHKW

A0A6J1DPJ1 S-protein homolog3.3e-4669.49Show/hide
Query:  VPLPLQTWHVHVVNGL-KNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDD
        +P+PL  W++HVVNGL  NATL VHCKSKDDDLG   L+  G E QWTF+IN W+TTLYWC +HKPNADVSFD+FWVEK HIWL YRC +  C W AKDD
Subjt:  VPLPLQTWHVHVVNGL-KNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDD

Query:  GIYLRNNPDGVDEFVHKW
        GIYLRN P+  DE VHKW
Subjt:  GIYLRNNPDGVDEFVHKW

A0A6J1H9E9 S-protein homolog1.3e-4760.78Show/hide
Query:  MGSSY--VRNMVYSVVLLGLV--LIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK
        M S+Y   R++  +  LLGL+   + QP   A G    +P+Q W VHVVN L NATL VHCKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L K
Subjt:  MGSSY--VRNMVYSVVLLGLV--LIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK

Query:  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW
        PNA VSF+AFW+EK HIWL+YRC   NC W A+DDG+YLRNNPD VDE VHKW
Subjt:  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW

A0A6J1L0E8 S-protein homolog1.9e-4962.09Show/hide
Query:  MGSSYV--RNMVYSVVLLGLV--LIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK
        M S+Y+  R++  +  LLGL+   + QP   A G    +P+Q W VHVVN L NATL VHCKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L K
Subjt:  MGSSYV--RNMVYSVVLLGLV--LIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK

Query:  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW
        PNA VSF+AFW+EK HIWL+YRC  +NC W AKDDG+YLRNNPDGVDE VHKW
Subjt:  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 23.1e-0933.33Show/hide
Query:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD
        V + N L N  TLL HCKSKDDDLG +TL   G  + ++F    +  TLY+CS   PN   SFD  + + +      +C +  C W  + +G    N+  
Subjt:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD

Query:  GVDEFVHKWGE
           +  + W +
Subjt:  GVDEFVHKWGE

F4JLS0 S-protein homolog 17.8e-2141.23Show/hide
Query:  LQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYL
        +  W V VVNGL    TL +HCKSK+DDLG   L      F W F  N+  +T +WC ++K N  ++ + FW +   + L +RC  +NC W AK DG+YL
Subjt:  LQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYL

Query:  RNNPDGVDEFVHKW
         N+  G D    KW
Subjt:  RNNPDGVDEFVHKW

Q2HQ46 S-protein homolog 745.6e-1935.1Show/hide
Query:  SYVRNMVYSVVLLGLVLIQQPFLFAKG----DPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPN
        +Y++  + ++    LVL  Q  + A+     D V   +  W V V NGL    TL +HCKSK++DLG   L      F W F  N+  +TL+WC + K +
Subjt:  SYVRNMVYSVVLLGLVLIQQPFLFAKG----DPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPN

Query:  ADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW
          ++   FW +   + L +RC  +NC W AK+DG+YL N+  G D    KW
Subjt:  ADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW

Q9FMQ4 S-protein homolog 36.9e-0931.19Show/hide
Query:  VHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD
        V + N L +  TL +HCKS DDDLG + L  NG+ + + F+ +I  TTL++C    P     FD +  ++  +  H  C+  NC W     G  + +  D
Subjt:  VHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD

Query:  GVDEFVHKW
              + W
Subjt:  GVDEFVHKW

Q9LW23 S-protein homolog 222.2e-0737.37Show/hide
Query:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKP---NADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR
        + +VN LKN  TL + C SK+D LGP T++ NG +F   F  N++ TT + C+L +    +   SF AF  +   +W           W A++DGIYLR
Subjt:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKP---NADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family2.2e-1033.33Show/hide
Query:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD
        V + N L N  TLL HCKSKDDDLG +TL   G  + ++F    +  TLY+CS   PN   SFD  + + +      +C +  C W  + +G    N+  
Subjt:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD

Query:  GVDEFVHKWGE
           +  + W +
Subjt:  GVDEFVHKWGE

AT4G16295.1 S-protein homologue 15.6e-2241.23Show/hide
Query:  LQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYL
        +  W V VVNGL    TL +HCKSK+DDLG   L      F W F  N+  +T +WC ++K N  ++ + FW +   + L +RC  +NC W AK DG+YL
Subjt:  LQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYL

Query:  RNNPDGVDEFVHKW
         N+  G D    KW
Subjt:  RNNPDGVDEFVHKW

AT4G29035.1 Plant self-incompatibility protein S1 family4.0e-2035.1Show/hide
Query:  SYVRNMVYSVVLLGLVLIQQPFLFAKG----DPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPN
        +Y++  + ++    LVL  Q  + A+     D V   +  W V V NGL    TL +HCKSK++DLG   L      F W F  N+  +TL+WC + K +
Subjt:  SYVRNMVYSVVLLGLVLIQQPFLFAKG----DPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPN

Query:  ADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW
          ++   FW +   + L +RC  +NC W AK+DG+YL N+  G D    KW
Subjt:  ADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW

AT5G04350.1 Plant self-incompatibility protein S1 family2.0e-1138.38Show/hide
Query:  NGLKNATLL-VHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK-PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGV
        N L+++ LL VHC+SKDDDLG + ++  G ++++TF  NIW+TT + C + + PN     D  +V  +  W   + +  +C WI ++DGIY   + DGV
Subjt:  NGLKNATLL-VHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK-PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGV

AT5G12060.1 Plant self-incompatibility protein S1 family4.9e-1031.19Show/hide
Query:  VHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD
        V + N L +  TL +HCKS DDDLG + L  NG+ + + F+ +I  TTL++C    P     FD +  ++  +  H  C+  NC W     G  + +  D
Subjt:  VHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD

Query:  GVDEFVHKW
              + W
Subjt:  GVDEFVHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCAAGCTACGTGAGAAATATGGTTTATTCAGTTGTATTATTGGGTTTGGTATTGATTCAACAACCATTCTTGTTTGCAAAAGGAGATCCAGTTCCACTACCACT
CCAAACCTGGCATGTTCATGTGGTTAATGGGCTAAAAAATGCCACTCTGCTTGTGCATTGTAAGTCCAAAGATGATGATTTGGGACCTCAAACTCTAGTTACCAATGGAG
CTGAATTTCAATGGACTTTCAAGATCAACATTTGGAGAACCACTTTGTATTGGTGCTCACTACACAAGCCAAATGCTGATGTTTCATTTGATGCATTTTGGGTTGAGAAG
AAACATATTTGGCTACATTATAGGTGCATGAACCAAAACTGCTTTTGGATTGCTAAAGATGACGGAATTTATTTAAGAAACAATCCTGATGGTGTTGATGAGTTTGTTCA
TAAGTGGGGAGAAGTCAGACCTACTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCAAGCTACGTGAGAAATATGGTTTATTCAGTTGTATTATTGGGTTTGGTATTGATTCAACAACCATTCTTGTTTGCAAAAGGAGATCCAGTTCCACTACCACT
CCAAACCTGGCATGTTCATGTGGTTAATGGGCTAAAAAATGCCACTCTGCTTGTGCATTGTAAGTCCAAAGATGATGATTTGGGACCTCAAACTCTAGTTACCAATGGAG
CTGAATTTCAATGGACTTTCAAGATCAACATTTGGAGAACCACTTTGTATTGGTGCTCACTACACAAGCCAAATGCTGATGTTTCATTTGATGCATTTTGGGTTGAGAAG
AAACATATTTGGCTACATTATAGGTGCATGAACCAAAACTGCTTTTGGATTGCTAAAGATGACGGAATTTATTTAAGAAACAATCCTGATGGTGTTGATGAGTTTGTTCA
TAAGTGGGGAGAAGTCAGACCTACTATTTGA
Protein sequenceShow/hide protein sequence
MGSSYVRNMVYSVVLLGLVLIQQPFLFAKGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEK
KHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKWGEVRPTI