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CaUC09G166340 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC09G166340
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionS-protein homolog
Genome locationCiama_Chr09:8744414..8750255
RNA-Seq ExpressionCaUC09G166340
SyntenyCaUC09G166340
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143645.1 S-protein homolog 1-like [Momordica charantia]3.4e-4871.68Show/hide
Query:  LQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR
        L  WH+HVVNGL   TL VHCKSKDDDLG   LVT G EFQWTF++N W TTLYWC L KPNADVSF++FWVE+ H+WL YRC ++NC W AKDDGIYLR
Subjt:  LQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR

Query:  NNPDGVDEFVHKW
        NNPDGVDE +H+W
Subjt:  NNPDGVDEFVHKW

XP_022155194.1 S-protein homolog 1-like [Momordica charantia]5.4e-4669.49Show/hide
Query:  VPLPLQTWHVHVVNGL-KNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDD
        +P+PL  W++HVVNGL  NATL VHCKSKDDDLG   L+  G E QWTF+IN W+TTLYWC +HKPNADVSFD+FWVEK HIWL YRC +  C W AKDD
Subjt:  VPLPLQTWHVHVVNGL-KNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDD

Query:  GIYLRNNPDGVDEFVHKW
        GIYLRN P+  DE VHKW
Subjt:  GIYLRNNPDGVDEFVHKW

XP_022959899.1 S-protein homolog 1-like [Cucurbita moschata]4.1e-4670.43Show/hide
Query:  LPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIY
        +P+Q W VHVVN L NATL VHCKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L KPNA VSF+AFW+EK HIWL+YRC   NC W A+DDG+Y
Subjt:  LPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIY

Query:  LRNNPDGVDEFVHKW
        LRNNPD VDE VHKW
Subjt:  LRNNPDGVDEFVHKW

XP_023004728.1 S-protein homolog 1-like [Cucurbita maxima]1.7e-4772.17Show/hide
Query:  LPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIY
        +P+Q W VHVVN L NATL VHCKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L KPNA VSF+AFW+EK HIWL+YRC  +NC W AKDDG+Y
Subjt:  LPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIY

Query:  LRNNPDGVDEFVHKW
        LRNNPDGVDE VHKW
Subjt:  LRNNPDGVDEFVHKW

XP_038896407.1 S-protein homolog 1-like [Benincasa hispida]2.6e-6987.88Show/hide
Query:  EQGITKASGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMN
        +Q +  A GDPVPLPLQ WHVHVVNGLKNATL VHCKSKDDDLGPQ LV+NGAEFQW+FKINIWRTTLYWCSLHKPNADVSFDAFWVE++HIWLHYRCMN
Subjt:  EQGITKASGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMN

Query:  QNCFWIAKDDGIYLRNNPDGVDEFVHKWGEAR
        QNCFW+AKDDGIYLRNNPD VDEFVHKW EAR
Subjt:  QNCFWIAKDDGIYLRNNPDGVDEFVHKWGEAR

TrEMBL top hitse value%identityAlignment
A0A5A7VL75 S-protein homolog1.1e-4465.55Show/hide
Query:  VPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDG
        VPLPL  W +HVVNGL N TLLVHCKSKDDDLG   LV+ G EFQWTFK+N + TTL+WC L KPN  VSF++FWVEK H WL+ RC + +C WIAKDD 
Subjt:  VPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDG

Query:  IYLRNNPDGVDEFVHKWGE
        +YLRNN D VDE +H+W +
Subjt:  IYLRNNPDGVDEFVHKWGE

A0A6J1CPC6 S-protein homolog1.6e-4871.68Show/hide
Query:  LQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR
        L  WH+HVVNGL   TL VHCKSKDDDLG   LVT G EFQWTF++N W TTLYWC L KPNADVSF++FWVE+ H+WL YRC ++NC W AKDDGIYLR
Subjt:  LQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR

Query:  NNPDGVDEFVHKW
        NNPDGVDE +H+W
Subjt:  NNPDGVDEFVHKW

A0A6J1DPJ1 S-protein homolog2.6e-4669.49Show/hide
Query:  VPLPLQTWHVHVVNGL-KNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDD
        +P+PL  W++HVVNGL  NATL VHCKSKDDDLG   L+  G E QWTF+IN W+TTLYWC +HKPNADVSFD+FWVEK HIWL YRC +  C W AKDD
Subjt:  VPLPLQTWHVHVVNGL-KNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDD

Query:  GIYLRNNPDGVDEFVHKW
        GIYLRN P+  DE VHKW
Subjt:  GIYLRNNPDGVDEFVHKW

A0A6J1H9E9 S-protein homolog2.0e-4670.43Show/hide
Query:  LPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIY
        +P+Q W VHVVN L NATL VHCKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L KPNA VSF+AFW+EK HIWL+YRC   NC W A+DDG+Y
Subjt:  LPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIY

Query:  LRNNPDGVDEFVHKW
        LRNNPD VDE VHKW
Subjt:  LRNNPDGVDEFVHKW

A0A6J1L0E8 S-protein homolog8.1e-4872.17Show/hide
Query:  LPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIY
        +P+Q W VHVVN L NATL VHCKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L KPNA VSF+AFW+EK HIWL+YRC  +NC W AKDDG+Y
Subjt:  LPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIY

Query:  LRNNPDGVDEFVHKW
        LRNNPDGVDE VHKW
Subjt:  LRNNPDGVDEFVHKW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.9e-0933.04Show/hide
Query:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD
        V + N L N  TLL HCKSKDDDLG +TL   G  + ++F    +  TLY+CS   PN   SFD  + + +      +C +  C W  + +G    N+  
Subjt:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD

Query:  GVDEFVHKWGEA
           +  + W ++
Subjt:  GVDEFVHKWGEA

F4JLS0 S-protein homolog 18.1e-2138.19Show/hide
Query:  LLLQTDDPPPIGSSTEQGITKASGDPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDA
        L L   D   +G +T + I       VP  +  W V VVNGL    TL +HCKSK+DDLG   L      F W F  N+  +T +WC ++K N  ++ + 
Subjt:  LLLQTDDPPPIGSSTEQGITKASGDPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDA

Query:  FWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW
        FW +   + L +RC  +NC W AK DG+YL N+  G D    KW
Subjt:  FWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW

Q2HQ46 S-protein homolog 742.2e-1839.17Show/hide
Query:  DPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAK
        D V   +  W V V NGL    TL +HCKSK++DLG   L      F W F  N+  +TL+WC + K +  ++   FW +   + L +RC  +NC W AK
Subjt:  DPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAK

Query:  DDGIYLRNNPDGVDEFVHKW
        +DG+YL N+  G D    KW
Subjt:  DDGIYLRNNPDGVDEFVHKW

Q9FMQ4 S-protein homolog 37.1e-0931.19Show/hide
Query:  VHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD
        V + N L +  TL +HCKS DDDLG + L  NG+ + + F+ +I  TTL++C    P     FD +  ++  +  H  C+  NC W     G  + +  D
Subjt:  VHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD

Query:  GVDEFVHKW
              + W
Subjt:  GVDEFVHKW

Q9LW23 S-protein homolog 223.0e-0737.37Show/hide
Query:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKP---NADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR
        + +VN LKN  TL + C SK+D LGP T++ NG +F   F  N++ TT + C+L +    +   SF AF  +   +W           W A++DGIYLR
Subjt:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKP---NADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family1.3e-1033.04Show/hide
Query:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD
        V + N L N  TLL HCKSKDDDLG +TL   G  + ++F    +  TLY+CS   PN   SFD  + + +      +C +  C W  + +G    N+  
Subjt:  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD

Query:  GVDEFVHKWGEA
           +  + W ++
Subjt:  GVDEFVHKWGEA

AT4G16295.1 S-protein homologue 15.7e-2238.19Show/hide
Query:  LLLQTDDPPPIGSSTEQGITKASGDPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDA
        L L   D   +G +T + I       VP  +  W V VVNGL    TL +HCKSK+DDLG   L      F W F  N+  +T +WC ++K N  ++ + 
Subjt:  LLLQTDDPPPIGSSTEQGITKASGDPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDA

Query:  FWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW
        FW +   + L +RC  +NC W AK DG+YL N+  G D    KW
Subjt:  FWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW

AT4G29035.1 Plant self-incompatibility protein S1 family1.6e-1939.17Show/hide
Query:  DPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAK
        D V   +  W V V NGL    TL +HCKSK++DLG   L      F W F  N+  +TL+WC + K +  ++   FW +   + L +RC  +NC W AK
Subjt:  DPVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAK

Query:  DDGIYLRNNPDGVDEFVHKW
        +DG+YL N+  G D    KW
Subjt:  DDGIYLRNNPDGVDEFVHKW

AT5G04350.1 Plant self-incompatibility protein S1 family2.0e-1138.38Show/hide
Query:  NGLKNATLL-VHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK-PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGV
        N L+++ LL VHC+SKDDDLG + ++  G ++++TF  NIW+TT + C + + PN     D  +V  +  W   + +  +C WI ++DGIY   + DGV
Subjt:  NGLKNATLL-VHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK-PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGV

AT5G12060.1 Plant self-incompatibility protein S1 family5.0e-1031.19Show/hide
Query:  VHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD
        V + N L +  TL +HCKS DDDLG + L  NG+ + + F+ +I  TTL++C    P     FD +  ++  +  H  C+  NC W     G  + +  D
Subjt:  VHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPD

Query:  GVDEFVHKW
              + W
Subjt:  GVDEFVHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACATCGAGGTCAGGAGCTGAACGTACGCTTGCTACTTCAAACGGATGACCCTCCGCCTATTGGTTCTTCCACTGAGCAAGGCATAACAAAGGCATCGGGAGATCC
AGTTCCACTACCACTCCAAACCTGGCATGTTCATGTGGTTAATGGGCTAAAAAATGCCACTTTGCTTGTGCATTGTAAGTCCAAAGATGATGATTTGGGACCTCAAACTC
TAGTTACCAATGGAGCTGAATTTCAATGGACTTTCAAGATCAACATTTGGAGAACCACTTTGTATTGGTGCTCACTACACAAGCCAAATGCTGATGTTTCATTTGATGCA
TTTTGGGTTGAGAAGAAACATATTTGGCTACATTATAGGTGCATGAATCAAAACTGCTTTTGGATTGCTAAAGATGACGGAATTTACTTAAGAAACAATCCTGATGGTGT
TGATGAGTTTGTTCATAAGTGGGGAGAAGCCAGACCTACTATTTGA
mRNA sequenceShow/hide mRNA sequence
CGGCGGCGAGGGCGGCACTTGACTGTATTTCTCTCTAAACTCGATTCTAGAGGCATGGCACATCGAGGTCAGGAGCTGAACGTACGCTTGCTACTTCAAACGGATGACCC
TCCGCCTATTGGTTCTTCCACTGAGCAAGGCATAACAAAGGCATCGGGAGATCCAGTTCCACTACCACTCCAAACCTGGCATGTTCATGTGGTTAATGGGCTAAAAAATG
CCACTTTGCTTGTGCATTGTAAGTCCAAAGATGATGATTTGGGACCTCAAACTCTAGTTACCAATGGAGCTGAATTTCAATGGACTTTCAAGATCAACATTTGGAGAACC
ACTTTGTATTGGTGCTCACTACACAAGCCAAATGCTGATGTTTCATTTGATGCATTTTGGGTTGAGAAGAAACATATTTGGCTACATTATAGGTGCATGAATCAAAACTG
CTTTTGGATTGCTAAAGATGACGGAATTTACTTAAGAAACAATCCTGATGGTGTTGATGAGTTTGTTCATAAGTGGGGAGAAGCCAGACCTACTATTTGA
Protein sequenceShow/hide protein sequence
MAHRGQELNVRLLLQTDDPPPIGSSTEQGITKASGDPVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDA
FWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKWGEARPTI