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CaUC09G169190 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC09G169190
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUV-B-induced protein At3g17800, chloroplastic
Genome locationCiama_Chr09:12166834..12168398
RNA-Seq ExpressionCaUC09G169190
SyntenyCaUC09G169190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136206.1 UV-B-induced protein At3g17800, chloroplastic isoform X1 [Cucumis sativus]1.9e-1248.21Show/hide
Query:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS
        MQISGVISDV VVIPSAGGLRS ELRHCHASIDSKSSISAGFFR  +        + L++F R     I A++D R  +    +  + P   L +    S
Subjt:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS

Query:  YSEAVKLTSPPQ
        +   +  T   Q
Subjt:  YSEAVKLTSPPQ

XP_008466019.1 PREDICTED: UV-B-induced protein At3g17800, chloroplastic [Cucumis melo]1.1e-1248.21Show/hide
Query:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS
        MQISGVISDV VVIPSAGGLRS ELRHCHASIDSK+SISAGFFR  +        + L++F R   + I A++D R  +    L  + P   L +    S
Subjt:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS

Query:  YSEAVKLTSPPQ
        +   +  T   Q
Subjt:  YSEAVKLTSPPQ

XP_022155880.1 UV-B-induced protein At3g17800, chloroplastic [Momordica charantia]4.3e-1290.91Show/hide
Query:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFR
        M+ISGVISDVSVVIPSAGGLRSPE+RHCHA IDSK+SISAGFFR
Subjt:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFR

XP_023534698.1 UV-B-induced protein At3g17800, chloroplastic [Cucurbita pepo subsp. pepo]2.1e-1145.54Show/hide
Query:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS
        MQISGVI DVSVV PSAGG+RS ELRHCHASIDSK+SISAGFFR  +        + L++F R   + I A+ D +  F    +  + P   L +    S
Subjt:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS

Query:  YSEAVKLTSPPQ
        +   +  T   Q
Subjt:  YSEAVKLTSPPQ

XP_038889051.1 UV-B-induced protein At3g17800, chloroplastic [Benincasa hispida]1.0e-1349.11Show/hide
Query:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS
        MQISGVISDVSVVIPSAGGLRSPELRHCHA IDSKSSISAGFFR  +        T L++F R   + I A++D +  +    +  + P   L +    S
Subjt:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS

Query:  YSEAVKLTSPPQ
        +   +  T   Q
Subjt:  YSEAVKLTSPPQ

TrEMBL top hitse value%identityAlignment
A0A0A0LE85 Uncharacterized protein9.3e-1348.21Show/hide
Query:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS
        MQISGVISDV VVIPSAGGLRS ELRHCHASIDSKSSISAGFFR  +        + L++F R     I A++D R  +    +  + P   L +    S
Subjt:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS

Query:  YSEAVKLTSPPQ
        +   +  T   Q
Subjt:  YSEAVKLTSPPQ

A0A1S3CRP9 UV-B-induced protein At3g17800, chloroplastic5.5e-1348.21Show/hide
Query:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS
        MQISGVISDV VVIPSAGGLRS ELRHCHASIDSK+SISAGFFR  +        + L++F R   + I A++D R  +    L  + P   L +    S
Subjt:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS

Query:  YSEAVKLTSPPQ
        +   +  T   Q
Subjt:  YSEAVKLTSPPQ

A0A5A7T8R3 UV-B-induced protein5.5e-1348.21Show/hide
Query:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS
        MQISGVISDV VVIPSAGGLRS ELRHCHASIDSK+SISAGFFR  +        + L++F R   + I A++D R  +    L  + P   L +    S
Subjt:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNS

Query:  YSEAVKLTSPPQ
        +   +  T   Q
Subjt:  YSEAVKLTSPPQ

A0A6J1DNM8 UV-B-induced protein At3g17800, chloroplastic2.1e-1290.91Show/hide
Query:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFR
        M+ISGVISDVSVVIPSAGGLRSPE+RHCHA IDSK+SISAGFFR
Subjt:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFR

A0A6J1K135 UV-B-induced protein At3g17800, chloroplastic1.0e-1188.64Show/hide
Query:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFR
        MQISGVI DVSVV PSAGG+RS ELRHCHASIDSK+SISAGFFR
Subjt:  MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATTTCGGGTGTAATCAGCGACGTTTCCGTCGTGATTCCGTCGGCCGGCGGTCTTCGGTCACCGGAACTGAGACACTGCCATGCATCTATCGATTCTAAGAGTTC
CATTTCCGCTGGATTCTTTAGACACAGTAACAAGCATGGTTATTTTGTGGAACTCACATTATTGGAACAATTTGGTCGCCGATCAAACATCCTCATTCCAGCTACGGAGG
ACAAAAGGGGTTGGTTCTCCTTCTTCTCATTGATTTCCGATTATCCCAACAAGAACCTGCAATCCAATAAGACCAATTCATACAGTGAAGCAGTAAAATTGACAAGCCCT
CCTCAATTTCAGCAAGAGCATGCTGCCCCTCCTCGGCATCATTATGCTAATCCAATCTCCCACACTGATTGGTTGGCTATGGTGATTGTTCAATGTTACATGACAAAAGA
CACTTGGATGTTCAAGAAACCATCTCACCTAGATGTTCCATCAATCCTCTTTCGGATGATAAAGCTCTCCTCCATGTTTACAACTCTGATATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATTTCGGGTGTAATCAGCGACGTTTCCGTCGTGATTCCGTCGGCCGGCGGTCTTCGGTCACCGGAACTGAGACACTGCCATGCATCTATCGATTCTAAGAGTTC
CATTTCCGCTGGATTCTTTAGACACAGTAACAAGCATGGTTATTTTGTGGAACTCACATTATTGGAACAATTTGGTCGCCGATCAAACATCCTCATTCCAGCTACGGAGG
ACAAAAGGGGTTGGTTCTCCTTCTTCTCATTGATTTCCGATTATCCCAACAAGAACCTGCAATCCAATAAGACCAATTCATACAGTGAAGCAGTAAAATTGACAAGCCCT
CCTCAATTTCAGCAAGAGCATGCTGCCCCTCCTCGGCATCATTATGCTAATCCAATCTCCCACACTGATTGGTTGGCTATGGTGATTGTTCAATGTTACATGACAAAAGA
CACTTGGATGTTCAAGAAACCATCTCACCTAGATGTTCCATCAATCCTCTTTCGGATGATAAAGCTCTCCTCCATGTTTACAACTCTGATATTCTGA
Protein sequenceShow/hide protein sequence
MQISGVISDVSVVIPSAGGLRSPELRHCHASIDSKSSISAGFFRHSNKHGYFVELTLLEQFGRRSNILIPATEDKRGWFSFFSLISDYPNKNLQSNKTNSYSEAVKLTSP
PQFQQEHAAPPRHHYANPISHTDWLAMVIVQCYMTKDTWMFKKPSHLDVPSILFRMIKLSSMFTTLIF