CuGenDBv2

Gene ID	CaUC09G170960
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	60S ribosomal protein L35
Genome location	Ciama_Chr09:19321685..19322008
RNA-Seq Expression	CaUC09G170960
Synteny	CaUC09G170960
Gene Ontology terms	GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR036049 - Ribosomal protein L29/L35 superfamily IPR045059 - 60S ribosomal protein L35

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

GAV80675.1 Ribosomal_L29 domain-containing protein [Cephalotus follicularis]

3.7e-19

70.37

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I + LTKHQASLKTE E++R +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

KAG7998768.1 hypothetical protein I3843_01G272600 [Carya illinoinensis]

6.8e-21

66.29

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNVLSIEEICY
        + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++E YKKKK L +DL+PK T  I + LT+HQASLKT  EEE +V S+EE+C+
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNVLSIEEICY

PON89563.1 Ribosomal protein [Trema orientale]

6.3e-19

69.14

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYK KKLL +DL+PK T  I + LTKHQASLKTE E++R++
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

TYG77058.1 hypothetical protein ES288_D03G164700v1 [Gossypium darwinii]

4.7e-22

69.66

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNVLSIEEICY
        + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKK L +DL+PK T  I + LTKHQ SLKTE EEE +VLS EE+C+
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNVLSIEEICY

XP_023549703.1 60S ribosomal protein L35-like [Cucurbita pepo subsp. pepo]

8.3e-19

69.14

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I + LTKHQASLKTE E+++ +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

TrEMBL top hits

e value

%identity

Alignment

A0A1Q3CKE6 Ribosomal_L29 domain-containing protein

1.8e-19

70.37

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I + LTKHQASLKTE E++R +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

A0A2P5EVJ6 Ribosomal protein

3.1e-19

69.14

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYK KKLL +DL+PK T  I + LTKHQASLKTE E++R++
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

A0A5D2D7Q5 Uncharacterized protein

2.3e-22

69.66

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNVLSIEEICY
        + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKK L +DL+PK T  I + LTKHQ SLKTE EEE +VLS EE+C+
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNVLSIEEICY

A0A6J1FH81 60S ribosomal protein L35

4.0e-19

69.14

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I + LTKHQASLKTE E+++ +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

A0A6J1JVN4 60S ribosomal protein L35

4.0e-19

69.14

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I + LTKHQASLKTE E+++ +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

SwissProt top hits

e value

%identity

Alignment

O80626 60S ribosomal protein L35-2

3.5e-20

66.67

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I + LTKHQASLKTE E+++ +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

Q9LZ41 60S ribosomal protein L35-4

3.5e-20

66.67

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I + LTKHQASLKTE E+++ +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

Q9M3D2 60S ribosomal protein L35-3

1.3e-19

65.43

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I + LTKHQASLKTE E+++++
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

Q9M5L0 60S ribosomal protein L35

3.5e-20

65.43

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK+A++EAYK KK L +DL+PK T  I + LTKHQ SLKTE E+++ +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

Q9SF53 60S ribosomal protein L35-1

1.7e-19

65.43

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I + LTKHQASLKTE E+++ +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

Arabidopsis top hits

e value

%identity

Alignment

AT2G39390.1 Ribosomal L29 family protein

2.5e-21

66.67

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I + LTKHQASLKTE E+++ +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

AT3G09500.1 Ribosomal L29 family protein

1.2e-20

65.43

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I + LTKHQASLKTE E+++ +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

AT3G55170.1 Ribosomal L29 family protein

9.4e-21

65.43

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I + LTKHQASLKTE E+++++
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

AT3G55170.2 Ribosomal L29 family protein

9.4e-21

65.43

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I + LTKHQASLKTE E+++++
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

AT5G02610.1 Ribosomal L29 family protein

2.5e-21

66.67

Show/hide

Query:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV
        + AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I + LTKHQASLKTE E+++ +
Subjt:  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAAGAAATGGCCAGGATCAAGGTTCATTAGTTGAGGCAGAAATTGAAGGCAAATTTGCCAAAGTCATCGGTGGTGCACCAAACAAGCTATCCAAAATCAAG
GTATTGAGATTGTCGATCACTCAAGTCCCAATAGTAATTTCTCAAAAGCAGAAGGTGGCAATCAAGGAAGCTTACAAGAAGAAGAAACTTTTGCATGTCGATCTG
CAGCCAAAGAATACCGAGGTCATCCATAAAACGCTCACCAAGCACCAGGCTTCTTTGAAAACTGAGACAGAAGAAGAAAGAAATGTACTTTCCATTGAGGAAATA
TGCTATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGRNGQDQGSLVEAEIEGKFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNVLSIEEI
CY

CaUC09G170960 (gene) of Watermelon (USVL246-FR2) v1 genome