; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC09G174580 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC09G174580
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionribosome biogenesis protein BOP1 homolog isoform X1
Genome locationCiama_Chr09:33669420..33671679
RNA-Seq ExpressionCaUC09G174580
SyntenyCaUC09G174580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602535.1 Eukaryotic translation initiation factor 3 subunit M, partial [Cucurbita argyrosperma subsp. sororia]3.6e-0941.44Show/hide
Query:  CQMGKICPYEQSSTVSAKSCAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNAR
        CQ+       Q+       CAK+QGVCAKCRC VDQ +GR                                        D+SEVEAEQKMLQEAIKNAR
Subjt:  CQMGKICPYEQSSTVSAKSCAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNAR

Query:  ERDRRTLLHVL
        ERD+RTLL  +
Subjt:  ERDRRTLLHVL
KAG7033212.1 hypothetical protein SDJN02_07266 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-0941.44Show/hide
Query:  CQMGKICPYEQSSTVSAKSCAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNAR
        CQ+       Q+       CAK+QGVCAKCRC VDQ +GR                                        D+SEVEAEQKMLQEAIKNAR
Subjt:  CQMGKICPYEQSSTVSAKSCAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNAR

Query:  ERDRRTLLHVL
        ERD+RTLL  +
Subjt:  ERDRRTLLHVL
XP_004141470.1 uncharacterized protein LOC101206376 [Cucumis sativus]4.2e-1051.09Show/hide
Query:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
        CAKEQGVCAKCRC VDQ VGR                                        DLSEVEAEQKMLQEAIKNARERDRRTLL  +
Subjt:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
XP_008459394.1 PREDICTED: uncharacterized protein LOC103498541 [Cucumis melo]4.2e-1051.09Show/hide
Query:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
        CAKEQGVCAKCRC VDQ VGR                                        DLSEVEAEQKMLQEAIKNARERDRRTLL  +
Subjt:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
XP_038889192.1 uncharacterized protein LOC120079072 [Benincasa hispida]2.1e-0950Show/hide
Query:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
        CAKEQGVCAKCRC VDQ VGR                                        DLSEVEAEQK LQEAIKNARERDRRTLL  +
Subjt:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
TrEMBL top hitse value%identityAlignment
A0A0A0KSJ8 Uncharacterized protein2.1e-1051.09Show/hide
Query:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
        CAKEQGVCAKCRC VDQ VGR                                        DLSEVEAEQKMLQEAIKNARERDRRTLL  +
Subjt:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
A0A1S3CAL0 uncharacterized protein LOC1034985412.1e-1051.09Show/hide
Query:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
        CAKEQGVCAKCRC VDQ VGR                                        DLSEVEAEQKMLQEAIKNARERDRRTLL  +
Subjt:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
A0A6J1GR32 glutamic acid-rich protein isoform X11.7e-0941.44Show/hide
Query:  CQMGKICPYEQSSTVSAKSCAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNAR
        CQ+       Q+       CAK+QGVCAKCRC VDQ +GR                                        D+SEVEAEQKMLQEAIKNAR
Subjt:  CQMGKICPYEQSSTVSAKSCAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNAR

Query:  ERDRRTLLHVL
        ERD+RTLL  +
Subjt:  ERDRRTLLHVL
A0A6J1JK71 ribosome biogenesis protein BOP1 homolog isoform X22.3e-0946.74Show/hide
Query:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
        CAK+QGVCAKCRC VDQ +GR                                        D+SEVEAEQKMLQEAIKNARERD+RTLL  +
Subjt:  CAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVL
A0A6J1JP90 ribosome biogenesis protein BOP1 homolog isoform X11.7e-0941.44Show/hide
Query:  CQMGKICPYEQSSTVSAKSCAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNAR
        CQ+       Q+       CAK+QGVCAKCRC VDQ +GR                                        D+SEVEAEQKMLQEAIKNAR
Subjt:  CQMGKICPYEQSSTVSAKSCAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNAR

Query:  ERDRRTLLHVL
        ERD+RTLL  +
Subjt:  ERDRRTLLHVL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02220.1 unknown protein8.5e-0939.25Show/hide
Query:  KICPYEQSSTVSAKSCAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDR
        K+CP           CAKEQ VCAKC   VDQI+GR                                        D+ EVEAEQK+L E IKNARERDR
Subjt:  KICPYEQSSTVSAKSCAKEQGVCAKCRCHVDQIVGRLMCESCVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDR

Query:  RTLLHVL
        RTLL  +
Subjt:  RTLLHVL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTATTTTCAACACGAATGCGGTCTTAAGAATTTAATGACAGCACGCCACACGCCATCATTGCACGCCGGACGCCACCACCTGACGCCCGACGCTGCACGCCTGAT
GCCCGACGTCGCACAACCAACGCCCGATGCCGCATGCCCAACGCCTGAAGCTCGACGCCGCATGCCGCACACGCCTTTCCGAACTTGCCAAATGGGGAAAATATGTCCTT
ATGAACAAAGTTCAACAGTAAGCGCTAAAAGTTGTGCCAAGGAGCAAGGTGTATGCGCAAAGTGCCGTTGTCATGTAGATCAAATTGTTGGAAGATTAATGTGTGAATCT
TGTGTTCTAGGAATAAGGAATGAAATTCTAAAAGAAAATGATCTTGTAAGGATGAATATATTGTGTTACTGTTACAAAAGTTGCGATATACAAGATGCCATTGGAGATTT
GTCTGAAGTGGAGGCTGAGCAAAAGATGCTTCAAGAGGCCATAAAGAATGCTCGAGAAAGGGATCGCAGAACTCTATTACATGTTCTAGCGTTGTTTTTCTGGGTTGATG
CGAGGTCTCAATGTAAAGAGCAACACAGCCCAACAGGCACCCGAAGTAAAGTAACTCCAGACTTGAGCAGTGTATTCAGAATGCAGGAGCAAATGGTTGGTAGGTTCACA
ACTTTTGCAGCACATAACACACATATTAGGGGAGCAACACAAGGTAGGGAATCTTCTTCGAACCAAACCCCATTGTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTATTTTCAACACGAATGCGGTCTTAAGAATTTAATGACAGCACGCCACACGCCATCATTGCACGCCGGACGCCACCACCTGACGCCCGACGCTGCACGCCTGAT
GCCCGACGTCGCACAACCAACGCCCGATGCCGCATGCCCAACGCCTGAAGCTCGACGCCGCATGCCGCACACGCCTTTCCGAACTTGCCAAATGGGGAAAATATGTCCTT
ATGAACAAAGTTCAACAGTAAGCGCTAAAAGTTGTGCCAAGGAGCAAGGTGTATGCGCAAAGTGCCGTTGTCATGTAGATCAAATTGTTGGAAGATTAATGTGTGAATCT
TGTGTTCTAGGAATAAGGAATGAAATTCTAAAAGAAAATGATCTTGTAAGGATGAATATATTGTGTTACTGTTACAAAAGTTGCGATATACAAGATGCCATTGGAGATTT
GTCTGAAGTGGAGGCTGAGCAAAAGATGCTTCAAGAGGCCATAAAGAATGCTCGAGAAAGGGATCGCAGAACTCTATTACATGTTCTAGCGTTGTTTTTCTGGGTTGATG
CGAGGTCTCAATGTAAAGAGCAACACAGCCCAACAGGCACCCGAAGTAAAGTAACTCCAGACTTGAGCAGTGTATTCAGAATGCAGGAGCAAATGGTTGGTAGGTTCACA
ACTTTTGCAGCACATAACACACATATTAGGGGAGCAACACAAGGTAGGGAATCTTCTTCGAACCAAACCCCATTGTATTGA
Protein sequenceShow/hide protein sequence
MFYFQHECGLKNLMTARHTPSLHAGRHHLTPDAARLMPDVAQPTPDAACPTPEARRRMPHTPFRTCQMGKICPYEQSSTVSAKSCAKEQGVCAKCRCHVDQIVGRLMCES
CVLGIRNEILKENDLVRMNILCYCYKSCDIQDAIGDLSEVEAEQKMLQEAIKNARERDRRTLLHVLALFFWVDARSQCKEQHSPTGTRSKVTPDLSSVFRMQEQMVGRFT
TFAAHNTHIRGATQGRESSSNQTPLY