; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC09G177130 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC09G177130
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRRM domain-containing protein
Genome locationCiama_Chr09:36401111..36406403
RNA-Seq ExpressionCaUC09G177130
SyntenyCaUC09G177130
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465688.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo]9.2e-18480.47Show/hide
Query:  MIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDE------DEDEI
        M+DS+ LHCRF T+ P +QHSCHYNS N TK R PHL+LSL  GSGPMGFPVFA K  GKGGI LT+ S SD +FD+FFDEDEDNFQDE      DEDEI
Subjt:  MIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDE------DEDEI

Query:  LLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKG
        LLPLKNTREWHAARPRGFGEGK YDTSIEDKLLQEMEQ REAQA NIN L NQ SS PNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI+RDL+VAFKG
Subjt:  LLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKG

Query:  FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAAEQFADVDVDL
        FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYL+FGRVQKQIKCEIMNR+TSSSA KSSV STN+S+L+ILEE AEQFAD+DVDL
Subjt:  FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAAEQFADVDVDL

Query:  TGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEKKSLIGIPGSA
             RT+IE+ ED++AY +E HS D DDNGVESRTE +IQS S+KEVNKI ELE IL +G+EE+HRE+SPIK KTKVSKKKQPKE GEKK L  IPGSA
Subjt:  TGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEKKSLIGIPGSA

Query:  KRLRIKEKAVLTDVYSRYGNKSALVSKEGN
        KRLRIKEKAVLTDVYSRYG KSAL+S+EG+
Subjt:  KRLRIKEKAVLTDVYSRYGNKSALVSKEGN

XP_022999318.1 uncharacterized protein LOC111493728 [Cucurbita maxima]1.8e-16372.73Show/hide
Query:  AVMIDSSSLHCRFITVWPSVQHSCHYNS--------------PNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDED
        A M+DS  LHCRFIT WPS  HS   NS              PN TK RS H SLSL HG  PM FPVF+ K  GKGG+ LT QS SD EFD   DED D
Subjt:  AVMIDSSSLHCRFITVWPSVQHSCHYNS--------------PNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDED

Query:  NFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI
               DE+LLPL N REW AARPRGFGEGKEYDTSIE+KLLQE+EQSR+AQA NIN L +Q  S PNSSRNVV+  APEI +TGVRVR+INLPKK+NI
Subjt:  NFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI

Query:  HRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAA
        HRDL++AFKGFPGI+NITPAVIGNKKTRDPICKGFAFVDCKSEGDA+SFLQ+FSG+YLTFGRVQKQIKCEIMN++TS+ A + SVVSTNHS+L+ILEE A
Subjt:  HRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAA

Query:  EQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEK
        EQ AD+D+DL G V RTR+EDIEDN+AY SELHSDD DDNGVESRTES+I   S+KE++KIHELEEI P+GREEVHRE  PI  KT+VSKKKQPKE GE 
Subjt:  EQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEK

Query:  KSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN
        KS + IPGSAKRLRIKEKAVLTDVYSRYG KSAL SKEGN
Subjt:  KSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN

XP_023547227.1 uncharacterized protein LOC111806104 [Cucurbita pepo subsp. pepo]1.4e-16372.34Show/hide
Query:  MIDSSSLHCRFITVWPSVQHSCHYNS-----------------PNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDE
        M+DS  LHCRFIT WPSV HS   NS                  N TK RS H SLSL HG  PM FPV A K  GKGG+ LT+QS SDNEFD   DED 
Subjt:  MIDSSSLHCRFITVWPSVQHSCHYNS-----------------PNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDE

Query:  DNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKN
        D       DE+LLPL N REW AARPRGFGEGKEYDTSIE+KLLQE+EQSR+AQA NIN L +Q  S PNS RNV +  APEI +TGVRVR+INLPKK+N
Subjt:  DNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKN

Query:  IHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEA
        IHRDL++AFKGFPGI+NITPAVIGNKKTRDPICKGFAFVDCKSEGDA+SFLQ+FSG+YLTFGRVQKQIKCEIMN++TS+SA + SVVSTN S+L+ILEE 
Subjt:  IHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEA

Query:  AEQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGE
        A Q AD+D+DL G V RTR+EDIEDN+AY SELHSDDEDDNGVESRTES+I   S+KE++KIHELEEI P+GREEVHRE  PI  KTKVSKKKQPKE GE
Subjt:  AEQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGE

Query:  KKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN
        KKS + IPGSAKRLRIKEKAVLTDVYSRYG KSA+ SKEGN
Subjt:  KKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN

XP_031741253.1 uncharacterized protein LOC101210443 [Cucumis sativus]1.2e-18080.66Show/hide
Query:  MIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKN
        M DS+ LHC F T+ P +QHSCHYNS   TK R PHL+LSL   SGPMGFPVFA K  GKGGI LTE S SD  FD+FFDE EDNFQ  DED+ILLPLKN
Subjt:  MIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKN

Query:  TREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIIN
        T+EWHAARPRGFGEGK YDTSIED LLQEMEQ REAQA NIN L +QSSS PNSSRNVVEIAAPEIVSTGV VRIINLP+KKNIHRDL+VAFKGFPGIIN
Subjt:  TREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIIN

Query:  ITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMR
        ITPAVIGNKKTRDP+CKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNR+TSSSA  SS+ STNHS+L+ILEE AEQF D+DVDL     R
Subjt:  ITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMR

Query:  TRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEKKSLIGIPGSAKRLRIK
        T+ EDIED++AY SE HS +EDDNGVESRTE  IQS S+KEVNKI ELEEILP+GREE+HRE+SPIK KTKVSKKKQPKE GEKK L  IPGSAKRLRIK
Subjt:  TRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEKKSLIGIPGSAKRLRIK

Query:  EKAVLTDVYSRYGNKSALVSKEGN
        EKAVLTDVYSRYG KSALVS+EGN
Subjt:  EKAVLTDVYSRYGNKSALVSKEGN

XP_038890170.1 uncharacterized protein LOC120079826 [Benincasa hispida]7.5e-19485.38Show/hide
Query:  MIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKN
        M DS SL CRF+T+WPSVQH CHYNSPN TK R PH S SL HGSGPMGFPVFA K SGKGG+ LTEQS SD EFD FFDEDED+FQDEDEDEILLPLKN
Subjt:  MIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKN

Query:  TREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIIN
        TREWH ARPRGFGEGK YDTSIEDKLLQEMEQSREAQA NIN LNNQS+S P SSRN VE A  EIVSTGVRVRI+NLPKKKNIHRDLIVAFK FPGIIN
Subjt:  TREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIIN

Query:  ITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMR
        ITPAVIGNKKTRDPICKGFAFVDCKSEGDALS LQAFSGRYLTFGRVQKQIKCEIMNRKT SS  KSSV STNHSQL ILEE AE+F D+DVDL G  MR
Subjt:  ITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMR

Query:  TRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEKKSLIGIPGSAKRLRIK
        TRIEDIED++ Y SELHSD EDDNGVESRTES+IQS SQ+EVNKIHE EEIL + REEV REISPIKGKTKVSKKKQPKE GEKKSL  IPGSAKRLRIK
Subjt:  TRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEKKSLIGIPGSAKRLRIK

Query:  EKAVLTDVYSRYGNKSALVSKEGN
        EKAVLTDVYSRYGNKSALVSKEGN
Subjt:  EKAVLTDVYSRYGNKSALVSKEGN

TrEMBL top hitse value%identityAlignment
A0A0A0KQN3 Uncharacterized protein6.2e-18678.27Show/hide
Query:  YYDKPPCKIAS-IFIYSGKIVLQSGAVMIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDN
        YYD+    +A+ IF +S KIV  +GA M DS+ LHC F T+ P +QHSCHYNS   TK R PHL+LSL   SGPMGFPVFA K  GKGGI LTE S SD 
Subjt:  YYDKPPCKIAS-IFIYSGKIVLQSGAVMIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDN

Query:  EFDKFFDEDEDNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRV
         FD+FFDE EDNFQ  DED+ILLPLKNT+EWHAARPRGFGEGK YDTSIED LLQEMEQ REAQA NIN L +QSSS PNSSRNVVEIAAPEIVSTGV V
Subjt:  EFDKFFDEDEDNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRV

Query:  RIINLPKKKNIHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTN
        RIINLP+KKNIHRDL+VAFKGFPGIINITPAVIGNKKTRDP+CKGFAFVDCKSEGDALSFLQAF+GRYLTFGRVQKQIKCEIMNR+TSSSA  SS+ STN
Subjt:  RIINLPKKKNIHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTN

Query:  HSQLTILEEAAEQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVS
        HS+L+ILEE AEQF D+DVDL     RT+ EDIED++AY SE HS +EDDNGVESRTE  IQS S+KEVNKI ELEEILP+GREE+HRE+SPIK KTKVS
Subjt:  HSQLTILEEAAEQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVS

Query:  KKKQPKENGEKKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN
        KKKQPKE GEKK L  IPGSAKRLRIKEKAVLTDVYSRYG KSALVS+EGN
Subjt:  KKKQPKENGEKKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN

A0A1S3CPG6 uncharacterized protein LOC1035033174.4e-18480.47Show/hide
Query:  MIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDE------DEDEI
        M+DS+ LHCRF T+ P +QHSCHYNS N TK R PHL+LSL  GSGPMGFPVFA K  GKGGI LT+ S SD +FD+FFDEDEDNFQDE      DEDEI
Subjt:  MIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDE------DEDEI

Query:  LLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKG
        LLPLKNTREWHAARPRGFGEGK YDTSIEDKLLQEMEQ REAQA NIN L NQ SS PNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI+RDL+VAFKG
Subjt:  LLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKG

Query:  FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAAEQFADVDVDL
        FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYL+FGRVQKQIKCEIMNR+TSSSA KSSV STN+S+L+ILEE AEQFAD+DVDL
Subjt:  FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAAEQFADVDVDL

Query:  TGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEKKSLIGIPGSA
             RT+IE+ ED++AY +E HS D DDNGVESRTE +IQS S+KEVNKI ELE IL +G+EE+HRE+SPIK KTKVSKKKQPKE GEKK L  IPGSA
Subjt:  TGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEKKSLIGIPGSA

Query:  KRLRIKEKAVLTDVYSRYGNKSALVSKEGN
        KRLRIKEKAVLTDVYSRYG KSAL+S+EG+
Subjt:  KRLRIKEKAVLTDVYSRYGNKSALVSKEGN

A0A6J1DEC7 uncharacterized protein LOC1110193059.3e-14265.53Show/hide
Query:  VMIDSSSLHCRFITVWPS----------VQHSCHY-----NSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDED
        +M+DS+SLH +    W S            ++  Y     ++PN TK  SPH  LSL H    +GF VFA+K   K G G+ + + SD EFD+FFDE   
Subjt:  VMIDSSSLHCRFITVWPS----------VQHSCHY-----NSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDED

Query:  NFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI
              E+E+LLPLK  +EW A RPRGFGEGKEYDTSIEDKLLQE+EQSR AQA NIN L NQSS   NSS++V E+ A +I STG  VRI+NLPKKKNI
Subjt:  NFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI

Query:  HRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAA
        HRDL+VAFK FPGIINI PAV+GNKKTRDPICKGFAFVDCKSEGDA+ FLQ FSG+YLTFGRVQKQIKCE++NR+TS+SA +SSV ST H+   I E  A
Subjt:  HRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAA

Query:  EQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEK
        EQ AD+D DL+  V+RTR+ED+E+N+   SELHSDDED+   ESRTES+I+S S+KE+ +IHE EEILP GREE+HREI PIKGK KVSKKKQPKE GEK
Subjt:  EQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEK

Query:  KSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKS-ALVSKEGN
        KSL  IPGSAKRLR+KEKAVLTDVYSRYGNKS ALVSKEGN
Subjt:  KSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKS-ALVSKEGN

A0A6J1G3T4 uncharacterized protein LOC1114505241.5e-16372.11Show/hide
Query:  MIDSSSLHCRFITVWPSVQHS-------------CHYN----SPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDE
        M+DS  LHCRF T WPS  HS               YN    +PN TK RS H SLSL HG  PM FPV A K  GKGG+ LT+QS SDNEFD   DED 
Subjt:  MIDSSSLHCRFITVWPSVQHS-------------CHYN----SPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDE

Query:  DNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKN
        D       DE+LLPL N REW AARPRGFGEGKEYDTSIE+KLLQE+EQSR+AQA NIN L +Q  S PNS RNVV+  APEI +TGVRVRIINLPKK+N
Subjt:  DNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKN

Query:  IHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEA
        IHRDL++AF+GFPGI+NITPAVIGNKKTRDPICKGFAFVDCKSEGDA+SFLQ+FSG+YLTFGRVQKQIKCEIMN++TS+SA + SVVSTN S+L+ILEE 
Subjt:  IHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEA

Query:  AEQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGE
        AEQ AD+D+DL G V RTR+ED+EDN+AY SEL SDDEDDNGVESRTES+I   S+KE++KIHELEE+ P+GREEVHRE  PI  KTKVSKKKQPKE GE
Subjt:  AEQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGE

Query:  KKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN
        KKS + IPGSAKRLRIKEKAVLTDVYSRYG KSAL SKEGN
Subjt:  KKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN

A0A6J1KJD4 uncharacterized protein LOC1114937288.7e-16472.73Show/hide
Query:  AVMIDSSSLHCRFITVWPSVQHSCHYNS--------------PNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDED
        A M+DS  LHCRFIT WPS  HS   NS              PN TK RS H SLSL HG  PM FPVF+ K  GKGG+ LT QS SD EFD   DED D
Subjt:  AVMIDSSSLHCRFITVWPSVQHSCHYNS--------------PNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDED

Query:  NFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI
               DE+LLPL N REW AARPRGFGEGKEYDTSIE+KLLQE+EQSR+AQA NIN L +Q  S PNSSRNVV+  APEI +TGVRVR+INLPKK+NI
Subjt:  NFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI

Query:  HRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAA
        HRDL++AFKGFPGI+NITPAVIGNKKTRDPICKGFAFVDCKSEGDA+SFLQ+FSG+YLTFGRVQKQIKCEIMN++TS+ A + SVVSTNHS+L+ILEE A
Subjt:  HRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEEAA

Query:  EQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEK
        EQ AD+D+DL G V RTR+EDIEDN+AY SELHSDD DDNGVESRTES+I   S+KE++KIHELEEI P+GREEVHRE  PI  KT+VSKKKQPKE GE 
Subjt:  EQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEK

Query:  KSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN
        KS + IPGSAKRLRIKEKAVLTDVYSRYG KSAL SKEGN
Subjt:  KSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G70200.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.8e-4831.09Show/hide
Query:  SGAVMIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSG--------PMGFPVFARKTSGKGGIGLTEQSVSDNEFD----KFFDEDED
        +GA + +S  LH   ++ + S   SC     +  +  S ++S+S                GF  FA      G   + E    D E D    +F  EDE 
Subjt:  SGAVMIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSG--------PMGFPVFARKTSGKGGIGLTEQSVSDNEFD----KFFDEDED

Query:  NFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI
          ++EDE E  LP+   ++W   +PRGFG GK+Y+T IEDKLL E+EQS +AQA N+N L N         R+   +        G RVR+ NLPKKKN+
Subjt:  NFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI

Query:  HRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVST------------
        HRDL VAFK   G+++ITPAV GNKKT+DP+CKGFA VD K+E DA  F++ F+G+ L FG+V KQIKC+++   +  S  K   +              
Subjt:  HRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVST------------

Query:  --------------------------------------NHSQLTILEEAAEQFADVDVDL--TGRVMRTRIEDIED------------NMAYASELHSDD
                                              NH   +I     E   D +  L    +V++  I + E+            +   A+E H DD
Subjt:  --------------------------------------NHSQLTILEEAAEQFADVDVDL--TGRVMRTRIEDIED------------NMAYASELHSDD

Query:  EDDNGVESRT----------------------ESRIQSQSQKEVNKIHELEEIL---------PEGREEVHREISPIKGKTKVSKKKQP---KENGEKKS
        E      + T                       S + S  +  V++I  LE+ L           G ++   + + ++GK K  KKK     K   +K +
Subjt:  EDDNGVESRT----------------------ESRIQSQSQKEVNKIHELEEIL---------PEGREEVHREISPIKGKTKVSKKKQP---KENGEKKS

Query:  LIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVS
         I IPGS+KRL++KEKA+LT V  +Y  K A  S
Subjt:  LIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTTATAAAAGTCGGATATTATGATAAACCACCCTGCAAAATTGCCTCTATCTTCATCTACAGTGGGAAAATTGTTCTTCAGAGCGGAGCAGTGATGATC
GATTCCTCGTCTCTTCATTGCCGTTTCATCACGGTTTGGCCGTCAGTGCAACACAGTTGCCATTACAACTCTCCCAATTTGACAAAACTCCGGTCACCCCATCTC
AGTTTATCTCTTGCTCATGGCTCAGGACCAATGGGTTTTCCTGTTTTTGCGAGGAAGACGTCTGGGAAAGGCGGCATTGGCCTCACTGAGCAGAGTGTTTCCGAC
AATGAGTTCGATAAATTTTTCGATGAGGATGAGGATAATTTTCAAGACGAGGATGAGGATGAGATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGCATGCGGCG
AGGCCTCGTGGATTTGGAGAAGGGAAGGAGTATGACACCTCGATTGAAGACAAATTGCTACAGGAAATGGAGCAGAGTAGGGAAGCTCAGGCTACAAATATCAAT
AATCTCAATAATCAGTCTTCTTCTGTGCCTAACTCTAGTAGAAATGTCGTGGAGATAGCAGCTCCAGAAATTGTTAGTACTGGAGTTCGTGTACGCATTATCAAC
CTTCCTAAAAAAAAGAACATTCACAGAGACCTGATCGTGGCTTTTAAAGGGTTTCCTGGAATAATCAATATAACTCCTGCAGTCATTGGAAACAAAAAGACTAGG
GATCCAATCTGCAAGGGGTTTGCATTTGTTGATTGCAAATCTGAAGGAGATGCCTTAAGTTTTCTGCAAGCATTTTCTGGTCGATATCTTACGTTTGGAAGGGTT
CAGAAGCAAATAAAATGTGAAATAATGAATCGAAAAACTTCGAGTTCAGCTCCCAAAAGTTCAGTGGTTAGTACCAATCATTCTCAACTAACTATTCTTGAAGAG
GCAGCAGAGCAGTTTGCTGATGTGGACGTGGATTTAACTGGAAGAGTCATGAGAACAAGGATTGAGGATATTGAAGACAATATGGCGTATGCCAGTGAATTACAT
TCGGATGATGAGGATGATAATGGTGTAGAATCAAGAACAGAGTCCAGAATTCAGTCACAATCCCAGAAGGAAGTAAATAAAATTCATGAACTAGAAGAAATTCTT
CCTGAAGGAAGAGAAGAAGTTCATCGGGAAATTTCACCTATCAAAGGGAAAACTAAGGTTTCAAAGAAGAAGCAACCTAAGGAAAATGGAGAGAAGAAATCATTG
ATAGGAATTCCAGGATCTGCCAAAAGGTTAAGGATAAAGGAGAAGGCTGTCTTAACTGACGTGTACTCAAGATATGGAAATAAATCAGCTTTGGTTTCAAAAGAA
GGGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATATTTATAAAAGTCGGATATTATGATAAACCACCCTGCAAAATTGCCTCTATCTTCATCTACAGTGGGAAAATTGTTCTTCAGAGCGGAGCAGTGATGATC
GATTCCTCGTCTCTTCATTGCCGTTTCATCACGGTTTGGCCGTCAGTGCAACACAGTTGCCATTACAACTCTCCCAATTTGACAAAACTCCGGTCACCCCATCTC
AGTTTATCTCTTGCTCATGGCTCAGGACCAATGGGTTTTCCTGTTTTTGCGAGGAAGACGTCTGGGAAAGGCGGCATTGGCCTCACTGAGCAGAGTGTTTCCGAC
AATGAGTTCGATAAATTTTTCGATGAGGATGAGGATAATTTTCAAGACGAGGATGAGGATGAGATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGCATGCGGCG
AGGCCTCGTGGATTTGGAGAAGGGAAGGAGTATGACACCTCGATTGAAGACAAATTGCTACAGGAAATGGAGCAGAGTAGGGAAGCTCAGGCTACAAATATCAAT
AATCTCAATAATCAGTCTTCTTCTGTGCCTAACTCTAGTAGAAATGTCGTGGAGATAGCAGCTCCAGAAATTGTTAGTACTGGAGTTCGTGTACGCATTATCAAC
CTTCCTAAAAAAAAGAACATTCACAGAGACCTGATCGTGGCTTTTAAAGGGTTTCCTGGAATAATCAATATAACTCCTGCAGTCATTGGAAACAAAAAGACTAGG
GATCCAATCTGCAAGGGGTTTGCATTTGTTGATTGCAAATCTGAAGGAGATGCCTTAAGTTTTCTGCAAGCATTTTCTGGTCGATATCTTACGTTTGGAAGGGTT
CAGAAGCAAATAAAATGTGAAATAATGAATCGAAAAACTTCGAGTTCAGCTCCCAAAAGTTCAGTGGTTAGTACCAATCATTCTCAACTAACTATTCTTGAAGAG
GCAGCAGAGCAGTTTGCTGATGTGGACGTGGATTTAACTGGAAGAGTCATGAGAACAAGGATTGAGGATATTGAAGACAATATGGCGTATGCCAGTGAATTACAT
TCGGATGATGAGGATGATAATGGTGTAGAATCAAGAACAGAGTCCAGAATTCAGTCACAATCCCAGAAGGAAGTAAATAAAATTCATGAACTAGAAGAAATTCTT
CCTGAAGGAAGAGAAGAAGTTCATCGGGAAATTTCACCTATCAAAGGGAAAACTAAGGTTTCAAAGAAGAAGCAACCTAAGGAAAATGGAGAGAAGAAATCATTG
ATAGGAATTCCAGGATCTGCCAAAAGGTTAAGGATAAAGGAGAAGGCTGTCTTAACTGACGTGTACTCAAGATATGGAAATAAATCAGCTTTGGTTTCAAAAGAA
GGGAACTAAAAGGAGTGGATGTTCCCTGAAATTAAGAACCAAATAAGCTGCTGAAGGACGCAATAATATGACGTATTTTGCCTCTATCTAGTGCATTGGTATTGG
TATTTCAAGTCAAATTCCTGCCAAAAATGAGAATTATTGAATCACCTTATCAGGTAAGGATGGTTTGGATTGCTGGAATGAAACCAAGATTGTTAACCGGGTTGT
GTTGGGATAATTGGTGGACTTTGGGTCTGTTTGGGATTGCTTTTAGGAGGATTAAAGGCGATTTAGGAGAAGTTTAACCATTTTGTATGTTTGGTAAGATAGATT
ATTCCTTGGTTTTTTTCCATTCTATATCAATAAAATTTTGAATGATTCTGTATTTT
Protein sequenceShow/hide protein sequence
MIFIKVGYYDKPPCKIASIFIYSGKIVLQSGAVMIDSSSLHCRFITVWPSVQHSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSD
NEFDKFFDEDEDNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLNNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIIN
LPKKKNIHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRKTSSSAPKSSVVSTNHSQLTILEE
AAEQFADVDVDLTGRVMRTRIEDIEDNMAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKENGEKKSL
IGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN