CuGenDBv2

Gene ID	CaUC09G177670
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Pre-mRNA-splicing factor like
Genome location	Ciama_Chr09:36947731..36951057
RNA-Seq Expression	CaUC09G177670
Synteny	CaUC09G177670
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK07949.1 uncharacterized protein E5676_scaffold265G00660 [Cucumis melo var. makuwa]

1.8e-55

93.33

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Query:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        NTDGFVIPSLGIEETDQT+VGSPKVEI+EPPPKVKEETTIYLGPHGAPPSQSKQDLNP NRKQRLK KLKEADRRTT GRENKLENLRELVG GKSSTNM
Subjt:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
         KGSSRDWLDPHCHEA+FEK
Subjt:  AKGSSRDWLDPHCHEAQFEK

XP_004150791.2 uncharacterized protein LOC101216518 [Cucumis sativus]

5.5e-57

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Query:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        +TDGFVIPSLGIEE DQT+VGSPKVEI+EPPPKVKEETTIYLGPHGAPPSQSKQDLNP NRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
Subjt:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
        AKGSSRDWLDPHCHEA+FEK
Subjt:  AKGSSRDWLDPHCHEAQFEK

XP_022139462.1 uncharacterized protein LOC111010385 [Momordica charantia]

8.0e-56

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Query:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        +TDGFVIPSLGIEETDQTKVGSP+VEI EPPPK KEETTIYLGPHGAPPSQSKQDLN  NRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
Subjt:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
        AKGSSRDWLDPHCHEAQFEK
Subjt:  AKGSSRDWLDPHCHEAQFEK

XP_022975858.1 uncharacterized protein LOC111476432 [Cucurbita maxima]

4.0e-55

94.26

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Query:  NTDGFVIPSLGI--EETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSST
        +TDGFVIPSLGI  EETDQTKV SPKVEIQEPPPKVKEE TIYLGPHGAPPSQSKQDLNPANRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSST
Subjt:  NTDGFVIPSLGI--EETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSST

Query:  NMAKGSSRDWLDPHCHEAQFEK
        NM KGSSRDWLDPHCHEAQFEK
Subjt:  NMAKGSSRDWLDPHCHEAQFEK

XP_038898121.1 uncharacterized protein LOC120085905 [Benincasa hispida]

1.5e-57

96.67

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Query:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        +TDGFVIPSLGIEET+QTK GSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNP NRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
Subjt:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
        AKGSSRDWLDPHCHEAQFEK
Subjt:  AKGSSRDWLDPHCHEAQFEK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K8B7 Uncharacterized protein

2.7e-57

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Query:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        +TDGFVIPSLGIEE DQT+VGSPKVEI+EPPPKVKEETTIYLGPHGAPPSQSKQDLNP NRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
Subjt:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
        AKGSSRDWLDPHCHEA+FEK
Subjt:  AKGSSRDWLDPHCHEAQFEK

A0A1S3CJS1 uncharacterized protein LOC103501243

3.3e-55

92.5

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Query:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        +TDGFVIPSLGIEETDQT+VGSPKVEI+EPPPKVKEETTIYLGPHGAPPSQSKQDLNP NRKQRLK KLKEADRRTT GRENKLENLRELVG GKSSTNM
Subjt:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
         KGSSRDWLDPHCHEA+FEK
Subjt:  AKGSSRDWLDPHCHEAQFEK

A0A5D3CCA9 Uncharacterized protein

8.6e-56

93.33

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Query:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        NTDGFVIPSLGIEETDQT+VGSPKVEI+EPPPKVKEETTIYLGPHGAPPSQSKQDLNP NRKQRLK KLKEADRRTT GRENKLENLRELVG GKSSTNM
Subjt:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
         KGSSRDWLDPHCHEA+FEK
Subjt:  AKGSSRDWLDPHCHEAQFEK

A0A6J1CE06 uncharacterized protein LOC111010385

3.9e-56

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Query:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        +TDGFVIPSLGIEETDQTKVGSP+VEI EPPPK KEETTIYLGPHGAPPSQSKQDLN  NRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
Subjt:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
        AKGSSRDWLDPHCHEAQFEK
Subjt:  AKGSSRDWLDPHCHEAQFEK

A0A6J1IKG2 uncharacterized protein LOC111476432

1.9e-55

94.26

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Query:  NTDGFVIPSLGI--EETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSST
        +TDGFVIPSLGI  EETDQTKV SPKVEIQEPPPKVKEE TIYLGPHGAPPSQSKQDLNPANRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSST
Subjt:  NTDGFVIPSLGI--EETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSST

Query:  NMAKGSSRDWLDPHCHEAQFEK
        NM KGSSRDWLDPHCHEAQFEK
Subjt:  NMAKGSSRDWLDPHCHEAQFEK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G55640.1 unknown protein

8.6e-32

61.11

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Query:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEP-PPKVKEETTIYLGPHGAPPSQSKQ-DLNPANRKQRLKQKLKEADRRTT-TGRENKLENLRELVGGG---
        +TDGFVIPSL IEE         +VE  +P  PK K E  IYLGPHGAPPSQ +    N ++RKQR KQ LKEAD++ + +GRENK+ NLRELVGGG   
Subjt:  NTDGFVIPSLGIEETDQTKVGSPKVEIQEP-PPKVKEETTIYLGPHGAPPSQSKQ-DLNPANRKQRLKQKLKEADRRTT-TGRENKLENLRELVGGG---

Query:  KSSTNMAKGSSRDWLDPHCHEAQFEK
        +  TNM KG SRDWLDPHCHE+QFEK
Subjt:  KSSTNMAKGSSRDWLDPHCHEAQFEK

Sequences

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CDS sequence

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ATGATCGTCAGTATTCAATGGACCCGTCGTCAGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGATAAATAGAAGATACTTGGATAAACCACGGCTAAAT
GGGCATTGCCAGTCCAAAAAACTCCCAGAAGTGCGTGGACGAACCATTGCTCACAACACTGATGGGTTCGTAATTCCTAGCTTGGGAATAGAAGAGACAGACCAA
ACTAAAGTTGGCTCTCCAAAAGTAGAAATTCAAGAACCTCCTCCAAAGGTTAAAGAAGAGACGACGATCTATCTTGGCCCACATGGTGCACCACCATCACAGTCA
AAACAAGATTTGAACCCCGCCAATCGTAAGCAACGGTTAAAGCAGAAATTGAAGGAAGCTGATCGGAGGACCACGACAGGACGAGAGAATAAGTTGGAGAATTTA
AGAGAGCTTGTAGGTGGTGGGAAATCAAGCACCAATATGGCAAAGGGTTCTTCTAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTCGAGAAGTAA

mRNA sequence

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Protein sequence

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MIVSIQWTRRQCTKLLQLKKMSGINRRYLDKPRLNGHCQSKKLPEVRGRTIAHNTDGFVIPSLGIEETDQTKVGSPKVEIQEPPPKVKEETTIYLGPHGAPPSQS
KQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK

CaUC09G177670 (gene) of Watermelon (USVL246-FR2) v1 genome