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CaUC09G177690 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC09G177690
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionmRNA decay activator protein ZFP36L2-like isoform X2
Genome locationCiama_Chr09:36955653..36958933
RNA-Seq ExpressionCaUC09G177690
SyntenyCaUC09G177690
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07952.1 tristetraprolin-like isoform X2 [Cucumis melo var. makuwa]7.8e-2282.54Show/hide
Query:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYTIMNHYA
        MEDRQ KRSS TSIIKGLNAS++ +NIQMD HLV+G TRHYHQETNCKSPTI+DCY IMNHYA
Subjt:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYTIMNHYA

XP_004148935.1 uncharacterized protein LOC101215865 [Cucumis sativus]1.2e-2284.13Show/hide
Query:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYTIMNHYA
        MEDRQGKRSS+TSIIKGLNAS++ +NIQMD HLV+G TRHYHQETNCKSPTI+DCY IMNHYA
Subjt:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYTIMNHYA

XP_022154583.1 uncharacterized protein LOC111021811 [Momordica charantia]9.2e-1575.44Show/hide
Query:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYT
        ME RQGKRSS+TSIIKGLN +V  INIQMD HLV+G T HYHQETNCKSPT++D Y+
Subjt:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYT

XP_023536047.1 mRNA decay activator protein ZFP36L2-like isoform X2 [Cucurbita pepo subsp. pepo]5.0e-1373.21Show/hide
Query:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCY
        MEDRQGKRSS+ +IIKGLNA+V+ I IQMD HLV+G T HYHQETN K PTI+D Y
Subjt:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCY

XP_038897010.1 uncharacterized protein LOC120085195 [Benincasa hispida]1.3e-2184.13Show/hide
Query:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYTIMNHYA
        MEDRQGKRS++TSIIKGLNASV+ INIQMD HLV+G TRHYHQETNC+SPTI+D YTIMNHYA
Subjt:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYTIMNHYA

TrEMBL top hitse value%identityAlignment
A0A5D3C9H3 Tristetraprolin-like isoform X23.8e-2282.54Show/hide
Query:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYTIMNHYA
        MEDRQ KRSS TSIIKGLNAS++ +NIQMD HLV+G TRHYHQETNCKSPTI+DCY IMNHYA
Subjt:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYTIMNHYA

A0A6J1DKP7 uncharacterized protein LOC1110218114.5e-1575.44Show/hide
Query:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYT
        ME RQGKRSS+TSIIKGLN +V  INIQMD HLV+G T HYHQETNCKSPT++D Y+
Subjt:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCYT

A0A6J1EPR1 uncharacterized protein LOC111436459 isoform X14.2e-1373.21Show/hide
Query:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCY
        MEDRQGKRSS+ S IKGLNA+V+ I IQMD HLV+G T HYHQETN K PTI+D Y
Subjt:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCY

A0A6J1EQM3 uncharacterized protein LOC111436579 isoform X14.2e-1373.21Show/hide
Query:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCY
        MEDRQGKRSS+ S IKGLNA+V+ I IQMD HLV+G T HYHQETN K PTI+D Y
Subjt:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCY

A0A6J1IEX1 uncharacterized protein LOC111472616 isoform X14.2e-1373.21Show/hide
Query:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCY
        MEDRQGKRSS+ SIIKGLN +V+ I IQMD HLV+G T HYHQETN K PTI+D Y
Subjt:  MEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIIDCY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAATGTCGTTCCTACTCCACTTCCAAACTTCGAATTCAAGAATTCATGCTCATTTTCCTTCCAAAGAAGAAATATGACTCTTAATCTCTCTCTCTCAAAT
CGGAGTCTCTCAACGGCGGATTCAATCGTAGGCTCCATACAATCTGTAGGTTCCAAAACGCGTTGTCGACGTCGTTACCGCCATGATCAACAATCAGTGTTGGAA
TTAAGAGAAAGCTTGTTGCTTGTATCTCTATCAGCTTTCCGTCCGTCTTTCTTAGACTATTGCATCAGGCCTTCTCTTACGACTCTGTCTCAGTCCAGGCTTTAT
CAAAACAAAATGTCGTTCCGTATCGGTAAAGGAGCTGAAAGACTAGGAAAGGACAAAGCATTTGCATTCAACATTGAAACAAAAGTTTCATCTCTCTTCTCCACT
TTAGCATCTCAATCTTTTGTTCATATTCATCTTTTGTTATCTCTGTTCATGGAAGATCGACAAGGCAAAAGGAGCTCTGAAACATCCATTATCAAAGGCCTAAAC
GCTTCGGTTCAGCTGATAAACATTCAGATGGACTATCACTTAGTAGTCGGGGAAACCAGACACTATCACCAGGAAACAAACTGTAAAAGCCCAACAATCATCGAT
TGTTACACTATTATGAATCACTATGCTAGAGCATTTCTGCAAGCAATAGCTTTGATTCTCGGGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAATGTCGTTCCTACTCCACTTCCAAACTTCGAATTCAAGAATTCATGCTCATTTTCCTTCCAAAGAAGAAATATGACTCTTAATCTCTCTCTCTCAAAT
CGGAGTCTCTCAACGGCGGATTCAATCGTAGGCTCCATACAATCTGTAGGTTCCAAAACGCGTTGTCGACGTCGTTACCGCCATGATCAACAATCAGTGTTGGAA
TTAAGAGAAAGCTTGTTGCTTGTATCTCTATCAGCTTTCCGTCCGTCTTTCTTAGACTATTGCATCAGGCCTTCTCTTACGACTCTGTCTCAGTCCAGGCTTTAT
CAAAACAAAATGTCGTTCCGTATCGGTAAAGGAGCTGAAAGACTAGGAAAGGACAAAGCATTTGCATTCAACATTGAAACAAAAGTTTCATCTCTCTTCTCCACT
TTAGCATCTCAATCTTTTGTTCATATTCATCTTTTGTTATCTCTGTTCATGGAAGATCGACAAGGCAAAAGGAGCTCTGAAACATCCATTATCAAAGGCCTAAAC
GCTTCGGTTCAGCTGATAAACATTCAGATGGACTATCACTTAGTAGTCGGGGAAACCAGACACTATCACCAGGAAACAAACTGTAAAAGCCCAACAATCATCGAT
TGTTACACTATTATGAATCACTATGCTAGAGCATTTCTGCAAGCAATAGCTTTGATTCTCGGGGAATAG
Protein sequenceShow/hide protein sequence
MSNVVPTPLPNFEFKNSCSFSFQRRNMTLNLSLSNRSLSTADSIVGSIQSVGSKTRCRRRYRHDQQSVLELRESLLLVSLSAFRPSFLDYCIRPSLTTLSQSRLY
QNKMSFRIGKGAERLGKDKAFAFNIETKVSSLFSTLASQSFVHIHLLLSLFMEDRQGKRSSETSIIKGLNASVQLINIQMDYHLVVGETRHYHQETNCKSPTIID
CYTIMNHYARAFLQAIALILGE