; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC09G177700 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC09G177700
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionNuclear transcription factor Y subunit B-3
Genome locationCiama_Chr09:36960386..36969019
RNA-Seq ExpressionCaUC09G177700
SyntenyCaUC09G177700
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607751.1 hypothetical protein SDJN03_01093, partial [Cucurbita argyrosperma subsp. sororia]1.4e-6468.8Show/hide
Query:  MEKFTDHCSSLC----------SSSSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLTL--LLLIPSTLFLAKKKKSDS-------LQISATEHLFD
        MEKFTDHC+SLC          SSSS SSS  QSRLN+ +VSTLLASICFL+LRFSPSFL+L  LLLIPS  FLA KK   S       L IS   HLFD
Subjt:  MEKFTDHCSSLC----------SSSSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLTL--LLLIPSTLFLAKKKKSDS-------LQISATEHLFD

Query:  EKPQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLP
        EKPQ TVEE SAAQIGEE SSDD+     SSSN G    GDF SDLWM LDEL RNLPFS+DSSSEDDDSLIEIPLLP         N   +RNL+TCLP
Subjt:  EKPQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLP

Query:  DLLPDSVLRQHGFVELLEEINEEDNLIEIDISKG
        DLLPDSVL+Q+GFVELLEEINEEDNLIEIDIS+G
Subjt:  DLLPDSVLRQHGFVELLEEINEEDNLIEIDISKG

KGN44012.1 hypothetical protein Csa_018206 [Cucumis sativus]2.1e-6574.88Show/hide
Query:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLT--LLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIGE
        MEKFT HCSSL SSSS    FTQSR NL I STLLASI FLTLRFSPSF T  LLLLIP+ LF+A KK +         HLFDE PQTT  +ES  QIG+
Subjt:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLT--LLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIGE

Query:  ERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEINEE
          SSDDETS  SSSSN+GGLG+GDF SDLWM+LDELTRNLP SED SS   +DDDSLIEIPLLPN N IRNL+TCLP+LLPDSVLRQHGFVELLEEINEE
Subjt:  ERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEINEE

Query:  DNLIEIDISKG
        DNLIEIDISKG
Subjt:  DNLIEIDISKG

TYK07951.1 hypothetical protein E5676_scaffold265G00700 [Cucumis melo var. makuwa]8.0e-6574.77Show/hide
Query:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLAIVSTLLASICFL-TLRFSPSFLT--LLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIG
        MEKFT HCSSL SSSS    FTQSR NL I STLLASI FL TLRFSPSF T  LLLL+P+TLFLA +K       S   HLFDEK  TT  +ESA  IG
Subjt:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLAIVSTLLASICFL-TLRFSPSFLT--LLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIG

Query:  EERSSDDETSTSSS--SSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEI
        E  SSDDETS SSS  SSN+GGLG+GDF SDLWM+LDELTRNLP SED SS   +DDDSLIEIPLLPN N IRNL+TCLP+LLPDSVLRQHGFVELLEEI
Subjt:  EERSSDDETSTSSS--SSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEI

Query:  NEEDNLIEIDISKG
        NEEDNLIEIDISKG
Subjt:  NEEDNLIEIDISKG

XP_022941469.1 uncharacterized protein LOC111446758 [Cucurbita moschata]1.4e-6469.4Show/hide
Query:  MEKFTDHCSSLC--------SSSSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLTL--LLLIPSTLFLAKKKKSDS-------LQISATEHLFDEK
        MEKFTDHC+SLC        SSSS SSS  QSRLN+ +VSTLLASICFL+LRFSPSFL+L  LLLIPS  FLA KK   S       L IS   HLFDEK
Subjt:  MEKFTDHCSSLC--------SSSSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLTL--LLLIPSTLFLAKKKKSDS-------LQISATEHLFDEK

Query:  PQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLPDL
        PQ TVEE SAAQIGEE SSDD+     SSSN G    GDF SDLWM LDEL RNLPFS+DSSSEDDDSLIEIPLLP         N   +RNL+TCLPDL
Subjt:  PQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLPDL

Query:  LPDSVLRQHGFVELLEEINEEDNLIEIDISKG
        LPDSVL+Q+GFVELLEEINEEDNLIEIDIS+G
Subjt:  LPDSVLRQHGFVELLEEINEEDNLIEIDISKG

XP_022981598.1 uncharacterized protein LOC111480668 [Cucurbita maxima]2.8e-6571.37Show/hide
Query:  MEKFTDHCSSLCSS----SSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLT-LLLLIPSTLFLAKKKKSDS-------LQISATEHLFDEKPQTTV
        MEKFTDHC+SLCSS    SS SSS  QSRLN+ +VSTLLASICFL+LRFSPSFL+ LLLLIPS  FLA KK   S       L IS   HLFDEKPQ TV
Subjt:  MEKFTDHCSSLCSS----SSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLT-LLLLIPSTLFLAKKKKSDS-------LQISATEHLFDEKPQTTV

Query:  EEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLPNMNAI---------RNLDTCLPDLLPDSV
        EE SAAQIGEE SSDD+     SSSN G    GDF SDLWM LDEL RNLPFS+DSSSEDDDSLIEIPLLP  +AI         RNL+TCLPDLLPDSV
Subjt:  EEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLPNMNAI---------RNLDTCLPDLLPDSV

Query:  LRQHGFVELLEEINEEDNLIEIDISKG
        L+Q+GFVELLEEINEEDNLIEIDIS+G
Subjt:  LRQHGFVELLEEINEEDNLIEIDISKG

TrEMBL top hitse value%identityAlignment
A0A0A0K6W9 Uncharacterized protein1.0e-6574.88Show/hide
Query:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLT--LLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIGE
        MEKFT HCSSL SSSS    FTQSR NL I STLLASI FLTLRFSPSF T  LLLLIP+ LF+A KK +         HLFDE PQTT  +ES  QIG+
Subjt:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLT--LLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIGE

Query:  ERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEINEE
          SSDDETS  SSSSN+GGLG+GDF SDLWM+LDELTRNLP SED SS   +DDDSLIEIPLLPN N IRNL+TCLP+LLPDSVLRQHGFVELLEEINEE
Subjt:  ERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEINEE

Query:  DNLIEIDISKG
        DNLIEIDISKG
Subjt:  DNLIEIDISKG

A0A2N9IRF2 Uncharacterized protein7.5e-0834.76Show/hide
Query:  SRLNLAIVSTLLASIC---FLTLRFSP-SFLTLLLLIPSTLF---LAKKK-----------------------KSDSLQISATEHLFDEKPQTTVEEESA
        SR +L  V+ L+ S+    F++  FSP S +T+ +L+ STLF   L+KKK                       K    Q    + L +   Q  V +E+ 
Subjt:  SRLNLAIVSTLLASIC---FLTLRFSP-SFLTLLLLIPSTLF---LAKKK-----------------------KSDSLQISATEHLFDEKPQTTVEEESA

Query:  AQIGEE---RSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDS-SSEDDDSLIEIPLLPNMNA------IRNLDTCLPDLLPDSVLRQH
          +  E    S  D    S S S+N  L    F  +L M  + + +NL FS+ S S EDDDSLIEI L  + +        +   + LPDLLP+S+ +Q 
Subjt:  AQIGEE---RSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDS-SSEDDDSLIEIPLLPNMNA------IRNLDTCLPDLLPDSVLRQH

Query:  GFVELLEEI---NEEDNLIEIDISKGSKCSRTR
        G +ELL EI   NEE+NLIEID+S GS   + R
Subjt:  GFVELLEEI---NEEDNLIEIDISKGSKCSRTR

A0A5D3C7W2 Uncharacterized protein3.9e-6574.77Show/hide
Query:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLAIVSTLLASICFL-TLRFSPSFLT--LLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIG
        MEKFT HCSSL SSSS    FTQSR NL I STLLASI FL TLRFSPSF T  LLLL+P+TLFLA +K       S   HLFDEK  TT  +ESA  IG
Subjt:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLAIVSTLLASICFL-TLRFSPSFLT--LLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIG

Query:  EERSSDDETSTSSS--SSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEI
        E  SSDDETS SSS  SSN+GGLG+GDF SDLWM+LDELTRNLP SED SS   +DDDSLIEIPLLPN N IRNL+TCLP+LLPDSVLRQHGFVELLEEI
Subjt:  EERSSDDETSTSSS--SSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEI

Query:  NEEDNLIEIDISKG
        NEEDNLIEIDISKG
Subjt:  NEEDNLIEIDISKG

A0A6J1FNF5 uncharacterized protein LOC1114467586.6e-6569.4Show/hide
Query:  MEKFTDHCSSLC--------SSSSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLTL--LLLIPSTLFLAKKKKSDS-------LQISATEHLFDEK
        MEKFTDHC+SLC        SSSS SSS  QSRLN+ +VSTLLASICFL+LRFSPSFL+L  LLLIPS  FLA KK   S       L IS   HLFDEK
Subjt:  MEKFTDHCSSLC--------SSSSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLTL--LLLIPSTLFLAKKKKSDS-------LQISATEHLFDEK

Query:  PQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLPDL
        PQ TVEE SAAQIGEE SSDD+     SSSN G    GDF SDLWM LDEL RNLPFS+DSSSEDDDSLIEIPLLP         N   +RNL+TCLPDL
Subjt:  PQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLPDL

Query:  LPDSVLRQHGFVELLEEINEEDNLIEIDISKG
        LPDSVL+Q+GFVELLEEINEEDNLIEIDIS+G
Subjt:  LPDSVLRQHGFVELLEEINEEDNLIEIDISKG

A0A6J1J2I9 uncharacterized protein LOC1114806681.3e-6571.37Show/hide
Query:  MEKFTDHCSSLCSS----SSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLT-LLLLIPSTLFLAKKKKSDS-------LQISATEHLFDEKPQTTV
        MEKFTDHC+SLCSS    SS SSS  QSRLN+ +VSTLLASICFL+LRFSPSFL+ LLLLIPS  FLA KK   S       L IS   HLFDEKPQ TV
Subjt:  MEKFTDHCSSLCSS----SSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLT-LLLLIPSTLFLAKKKKSDS-------LQISATEHLFDEKPQTTV

Query:  EEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLPNMNAI---------RNLDTCLPDLLPDSV
        EE SAAQIGEE SSDD+     SSSN G    GDF SDLWM LDEL RNLPFS+DSSSEDDDSLIEIPLLP  +AI         RNL+TCLPDLLPDSV
Subjt:  EEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLPNMNAI---------RNLDTCLPDLLPDSV

Query:  LRQHGFVELLEEINEEDNLIEIDISKG
        L+Q+GFVELLEEINEEDNLIEIDIS+G
Subjt:  LRQHGFVELLEEINEEDNLIEIDISKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGTTCACTGACCACTGCTCTTCACTCTGTTCATCTTCATCATTATCATCCTCTTTCACACAATCACGCCTCAATCTCGCCATTGTTTCAACTCTTCTA
GCTTCAATCTGTTTCCTCACTCTCCGATTCTCCCCTTCCTTCCTCACACTCCTTCTTCTAATCCCTTCCACTCTCTTCCTCGCTAAGAAGAAAAAATCAGATTCG
CTTCAAATCTCCGCCACCGAACATCTGTTCGACGAAAAGCCTCAAACAACAGTGGAAGAAGAATCCGCTGCGCAAATCGGAGAAGAGCGTTCTTCCGATGATGAA
ACTAGTACTAGTAGCAGCAGCAGTAATAATGGCGGATTAGGAAATGGAGATTTCAACTCCGATCTCTGGATGTATTTGGACGAACTGACACGGAATCTTCCGTTC
TCTGAGGATTCGAGTTCCGAAGACGACGATAGCCTGATCGAAATTCCTCTTCTTCCAAACATGAATGCGATTCGAAATCTTGATACGTGTTTGCCTGATTTGTTA
CCGGATTCTGTTTTGAGACAACACGGATTTGTGGAGCTTTTGGAAGAGATCAATGAGGAAGATAACTTGATTGAGATCGATATTTCCAAAGGTTCCAAGTGTTCA
AGAACTCGTTATCGACGTCGTTATCGCCATGATCAACAATCATTGCTGCAATTAAGAGCTTTCCGTCCGTCTTTCTTAGACTATCGCTTCAAGCCTTCTCTTACA
ACTCTGTCTCAGTCCAGGCTTTATCAAAACAAAATGTCGTTCCATATCGGCAAGTTAGCCTTGTTATTTTGTAAATTTGTTAGGCCAATAGATACTGTAGACCTT
TGGATGGCTTTTGGCTTCACTCGTTTTGTCTTCATGAGGTCTACTGTCTCCGGACTATGGTTCGTTTGCTCCTCAAAAGGTAAAGGAGAAGCTGAAAGACTAGGA
AAGGAGAAAACATTTGCATTCTACATTGAAGCACAAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGTTCACTGACCACTGCTCTTCACTCTGTTCATCTTCATCATTATCATCCTCTTTCACACAATCACGCCTCAATCTCGCCATTGTTTCAACTCTTCTA
GCTTCAATCTGTTTCCTCACTCTCCGATTCTCCCCTTCCTTCCTCACACTCCTTCTTCTAATCCCTTCCACTCTCTTCCTCGCTAAGAAGAAAAAATCAGATTCG
CTTCAAATCTCCGCCACCGAACATCTGTTCGACGAAAAGCCTCAAACAACAGTGGAAGAAGAATCCGCTGCGCAAATCGGAGAAGAGCGTTCTTCCGATGATGAA
ACTAGTACTAGTAGCAGCAGCAGTAATAATGGCGGATTAGGAAATGGAGATTTCAACTCCGATCTCTGGATGTATTTGGACGAACTGACACGGAATCTTCCGTTC
TCTGAGGATTCGAGTTCCGAAGACGACGATAGCCTGATCGAAATTCCTCTTCTTCCAAACATGAATGCGATTCGAAATCTTGATACGTGTTTGCCTGATTTGTTA
CCGGATTCTGTTTTGAGACAACACGGATTTGTGGAGCTTTTGGAAGAGATCAATGAGGAAGATAACTTGATTGAGATCGATATTTCCAAAGGTTCCAAGTGTTCA
AGAACTCGTTATCGACGTCGTTATCGCCATGATCAACAATCATTGCTGCAATTAAGAGCTTTCCGTCCGTCTTTCTTAGACTATCGCTTCAAGCCTTCTCTTACA
ACTCTGTCTCAGTCCAGGCTTTATCAAAACAAAATGTCGTTCCATATCGGCAAGTTAGCCTTGTTATTTTGTAAATTTGTTAGGCCAATAGATACTGTAGACCTT
TGGATGGCTTTTGGCTTCACTCGTTTTGTCTTCATGAGGTCTACTGTCTCCGGACTATGGTTCGTTTGCTCCTCAAAAGGTAAAGGAGAAGCTGAAAGACTAGGA
AAGGAGAAAACATTTGCATTCTACATTGAAGCACAAGGTTAA
Protein sequenceShow/hide protein sequence
MEKFTDHCSSLCSSSSLSSSFTQSRLNLAIVSTLLASICFLTLRFSPSFLTLLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIGEERSSDDE
TSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGSKCS
RTRYRRRYRHDQQSLLQLRAFRPSFLDYRFKPSLTTLSQSRLYQNKMSFHIGKLALLFCKFVRPIDTVDLWMAFGFTRFVFMRSTVSGLWFVCSSKGKGEAERLG
KEKTFAFYIEAQG