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CaUC09G178100 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC09G178100
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDUF2431 domain-containing protein
Genome locationCiama_Chr09:37309073..37309994
RNA-Seq ExpressionCaUC09G178100
SyntenyCaUC09G178100
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0070042 - rRNA (uridine-N3-)-methyltransferase activity (molecular function)
InterPro domainsIPR019446 - Domain of unknown function DUF2431


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5081695.1 hypothetical protein JHK86_005760 [Glycine max]3.9e-3164.17Show/hide
Query:  EKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRI
        EKKIKHYSS H ILLVGEGDFSFS  LA AFG+ASN++ATSLDSK T+I         KY+R S NL ++E  G  +VHEVD  TM++HPLL  K F RI
Subjt:  EKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRI

Query:  VFNFPHAGFHFNEHDNLQIE
        VFNFPHAGF + EHD+ QIE
Subjt:  VFNFPHAGFHFNEHDNLQIE

TYK23208.1 uncharacterized protein E5676_scaffold142G002400 [Cucumis melo var. makuwa]6.4e-3463.2Show/hide
Query:  LSNDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEK
        + +++EK IKHYSSSH ILLVGEGDFSFSACLA AF +ASNI+ATSLDS   +++        KYT  +RNL+ +E  GGRV+H+VDATTMSQHPLLY+ 
Subjt:  LSNDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEK

Query:  SFHRIVFNFPHAGFHFNEHDNLQIE
         F RIVFNFPHAGF + E +  QIE
Subjt:  SFHRIVFNFPHAGFHFNEHDNLQIE

XP_008448100.1 PREDICTED: uncharacterized protein At4g26485-like [Cucumis melo]1.7e-3464Show/hide
Query:  LSNDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEK
        + +D+EK IKHYSSSH ILLVGEGDFSFSACLA AF +ASNI+ATSLDS   +++        KYT  +RNL+ +E  GGRV+H+VDATTMSQHPLLY+ 
Subjt:  LSNDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEK

Query:  SFHRIVFNFPHAGFHFNEHDNLQIE
         F RIVFNFPHAGF + E +  QIE
Subjt:  SFHRIVFNFPHAGFHFNEHDNLQIE

XP_011659737.1 uncharacterized protein At4g26485 [Cucumis sativus]3.2e-3362.6Show/hide
Query:  NDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSF
        N++EK I HYSSSH ILLVGEGDFSFSACLA AF +ASNI+ATSLDS+  +++        KY R +RN++ +E  GG V+HEVDATTMSQHPLL++  F
Subjt:  NDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSF

Query:  HRIVFNFPHAGFHFNEHDNLQIE
         RIVFNFPHAGF + E +  QIE
Subjt:  HRIVFNFPHAGFHFNEHDNLQIE

XP_022139691.1 uncharacterized protein At4g26485-like [Momordica charantia]1.3e-3464.34Show/hide
Query:  MEELSNDSEKK-IKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPL
        ME+L+N  ++K IKHYSSSHTILLVGEGDFSFS CLA  FG+A+N++ATSLDSK        +SL  KYT V+ NL+++E  G  V H+VDAT+MSQHPL
Subjt:  MEELSNDSEKK-IKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPL

Query:  LYEKSFHRIVFNFPHAGFHFNEHDNLQIE
        L  KSF R+VFNFPHAGFHF E D  QIE
Subjt:  LYEKSFHRIVFNFPHAGFHFNEHDNLQIE

TrEMBL top hitse value%identityAlignment
A0A0A0K734 DUF2431 domain-containing protein1.5e-3362.6Show/hide
Query:  NDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSF
        N++EK I HYSSSH ILLVGEGDFSFSACLA AF +ASNI+ATSLDS+  +++        KY R +RN++ +E  GG V+HEVDATTMSQHPLL++  F
Subjt:  NDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSF

Query:  HRIVFNFPHAGFHFNEHDNLQIE
         RIVFNFPHAGF + E +  QIE
Subjt:  HRIVFNFPHAGFHFNEHDNLQIE

A0A0R0LAC4 DUF2431 domain-containing protein1.9e-3164.17Show/hide
Query:  EKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRI
        EKKIKHYSS H ILLVGEGDFSFS  LA AFG+ASN++ATSLDSK T+I         KY+R S NL ++E  G  +VHEVD  TM++HPLL  K F RI
Subjt:  EKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRI

Query:  VFNFPHAGFHFNEHDNLQIE
        VFNFPHAGF + EHD+ QIE
Subjt:  VFNFPHAGFHFNEHDNLQIE

A0A1S3BIC4 uncharacterized protein At4g26485-like8.1e-3564Show/hide
Query:  LSNDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEK
        + +D+EK IKHYSSSH ILLVGEGDFSFSACLA AF +ASNI+ATSLDS   +++        KYT  +RNL+ +E  GGRV+H+VDATTMSQHPLLY+ 
Subjt:  LSNDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEK

Query:  SFHRIVFNFPHAGFHFNEHDNLQIE
         F RIVFNFPHAGF + E +  QIE
Subjt:  SFHRIVFNFPHAGFHFNEHDNLQIE

A0A5D3DIB6 DUF2431 domain-containing protein3.1e-3463.2Show/hide
Query:  LSNDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEK
        + +++EK IKHYSSSH ILLVGEGDFSFSACLA AF +ASNI+ATSLDS   +++        KYT  +RNL+ +E  GGRV+H+VDATTMSQHPLLY+ 
Subjt:  LSNDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEK

Query:  SFHRIVFNFPHAGFHFNEHDNLQIE
         F RIVFNFPHAGF + E +  QIE
Subjt:  SFHRIVFNFPHAGFHFNEHDNLQIE

A0A6J1CDH1 uncharacterized protein At4g26485-like6.2e-3564.34Show/hide
Query:  MEELSNDSEKK-IKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPL
        ME+L+N  ++K IKHYSSSHTILLVGEGDFSFS CLA  FG+A+N++ATSLDSK        +SL  KYT V+ NL+++E  G  V H+VDAT+MSQHPL
Subjt:  MEELSNDSEKK-IKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPL

Query:  LYEKSFHRIVFNFPHAGFHFNEHDNLQIE
        L  KSF R+VFNFPHAGFHF E D  QIE
Subjt:  LYEKSFHRIVFNFPHAGFHFNEHDNLQIE

SwissProt top hitse value%identityAlignment
F4I1X0 Heavy metal-associated isoprenylated plant protein 412.5e-2552.54Show/hide
Query:  DSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFH
        D E  +KHYSS+H ILLVGEGDFSFS  LA  FG+ASNI A+SLDS        Y  + RKY +   NL+ ++  G  ++H VDATT+  HP L  + F 
Subjt:  DSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFH

Query:  RIVFNFPHAGFHFNEHDN
        R++FNFPHAGFH  E D+
Subjt:  RIVFNFPHAGFHFNEHDN

O94480 25S rRNA (uridine-N(3))-methyltransferase9.3e-1234.19Show/hide
Query:  SEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASN-ILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFH
        +E+ +  +  ++  LL+GEG+FSF+  L +   ++   +LATS DSK        + L +KY   +  + K+E+ GG+V+HE+DAT +  H  L  + F 
Subjt:  SEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASN-ILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFH

Query:  RIVFNFPHAGFHFNEHD
         I +NFPH+G    + D
Subjt:  RIVFNFPHAGFHFNEHD

P0C8L4 Uncharacterized protein At4g264858.4e-2153.57Show/hide
Query:  SEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHR
        SEK I+HYSS+H ILLVGEG+FSFS CLA AFG+A NI ATSLDS+          LS KY     N+  ++  G  + HEVD  TMS    L  + + R
Subjt:  SEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHR

Query:  IVFNFPHAGFHF
        IVFNFPHAG  F
Subjt:  IVFNFPHAGFHF

Q3UY23 Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog4.2e-0431.25Show/hide
Query:  ILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRIVFNFPHAG
        +LLVGEG+FSF+A L      + ++ AT    +  +                 NL+++   G  V   VD T +S      ++ F RI FNFPH G
Subjt:  ILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRIVFNFPHAG

Q9BRP7 Ferredoxin-fold anticodon-binding domain-containing protein 19.3e-0431.25Show/hide
Query:  ILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRIVFNFPHAG
        +LLVGEG+FSF+A L+     ++ + AT L     +          +      NL+ +   G  V   VD T ++    L+E+ F +I F FPH G
Subjt:  ILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRIVFNFPHAG

Arabidopsis top hitse value%identityAlignment
AT1G55790.1 Domain of unknown function (DUF2431)1.8e-2652.54Show/hide
Query:  DSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFH
        D E  +KHYSS+H ILLVGEGDFSFS  LA  FG+ASNI A+SLDS        Y  + RKY +   NL+ ++  G  ++H VDATT+  HP L  + F 
Subjt:  DSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFH

Query:  RIVFNFPHAGFHFNEHDN
        R++FNFPHAGFH  E D+
Subjt:  RIVFNFPHAGFHFNEHDN

AT1G55800.1 Domain of unknown function (DUF2431)3.4e-2546.81Show/hide
Query:  DSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDS-------KGTIILPGYKS------------LSRKYTRVSRNLEKMELAGGRVVH
        D E  +KHYSS H ILLVGEGDFSFS  LA  FG+ASNI A+SLDS       KG      + S            + RKY     NLE ++  G  ++H
Subjt:  DSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDS-------KGTIILPGYKS------------LSRKYTRVSRNLEKMELAGGRVVH

Query:  EVDATTMSQHPLLYEKSFHRIVFNFPHAGFHFNEHDNLQIE
         VDATT+  HP L  + F R++FNFPH GFH  E D  QI+
Subjt:  EVDATTMSQHPLLYEKSFHRIVFNFPHAGFHFNEHDNLQIE

AT5G25030.1 Domain of unknown function (DUF2431)2.3e-1341.12Show/hide
Query:  KKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRIV
        K++  YS+   IL+VGEG+FSFS  LA A G+A+NI A SLD +        + L R Y     N+E++E  G  VV  V+  +M     L    +  I+
Subjt:  KKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRIV

Query:  FNFPHAG
        FNFPHAG
Subjt:  FNFPHAG

AT5G56060.1 Domain of unknown function (DUF2431)1.5e-1747.79Show/hide
Query:  IKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRIVFN
        ++ YS+   ILLVGEGDFSFS  LA  FG+A+NI ATSLD++        + L  KYT    N+E +EL G  VVH V+  +MS    L    + RI+FN
Subjt:  IKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRIVFN

Query:  FPHAGFHF-NEHD
        FPH+G  F +EHD
Subjt:  FPHAGFHF-NEHD

AT5G56075.1 Domain of unknown function (DUF2431)8.3e-1642.86Show/hide
Query:  KKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKS-FHRI
        K+++HY++   ILLVGEGDFSFS  LA AFG+ASN+ ATSLD++G         L +K+     N+E++E  G  VV+ V+  +M   P +   + + R+
Subjt:  KKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKS-FHRI

Query:  VFNFP
        +FNFP
Subjt:  VFNFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATTGTCGAACGATAGCGAGAAGAAAATAAAGCATTACAGCAGTTCCCATACAATACTTCTCGTCGGAGAAGGCGACTTCTCTTTCTCCGCTTGCTTGGCCGT
AGCCTTTGGAAATGCTTCTAACATTCTTGCTACTTCCCTCGACTCTAAAGGTACTATAATCTTACCTGGGTATAAGTCACTGTCGAGGAAGTACACACGTGTGAGTAGAA
ACTTGGAAAAAATGGAGTTGGCGGGTGGGAGAGTGGTGCATGAAGTGGATGCGACAACAATGAGTCAACACCCACTTCTTTACGAAAAGTCGTTCCATCGTATAGTGTTT
AACTTCCCTCATGCAGGGTTTCATTTCAACGAACATGACAATTTACAAATTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAATTGTCGAACGATAGCGAGAAGAAAATAAAGCATTACAGCAGTTCCCATACAATACTTCTCGTCGGAGAAGGCGACTTCTCTTTCTCCGCTTGCTTGGCCGT
AGCCTTTGGAAATGCTTCTAACATTCTTGCTACTTCCCTCGACTCTAAAGGTACTATAATCTTACCTGGGTATAAGTCACTGTCGAGGAAGTACACACGTGTGAGTAGAA
ACTTGGAAAAAATGGAGTTGGCGGGTGGGAGAGTGGTGCATGAAGTGGATGCGACAACAATGAGTCAACACCCACTTCTTTACGAAAAGTCGTTCCATCGTATAGTGTTT
AACTTCCCTCATGCAGGGTTTCATTTCAACGAACATGACAATTTACAAATTGAGTGA
Protein sequenceShow/hide protein sequence
MEELSNDSEKKIKHYSSSHTILLVGEGDFSFSACLAVAFGNASNILATSLDSKGTIILPGYKSLSRKYTRVSRNLEKMELAGGRVVHEVDATTMSQHPLLYEKSFHRIVF
NFPHAGFHFNEHDNLQIE