; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC09G178200 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC09G178200
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionKH domain-containing protein
Genome locationCiama_Chr09:37408326..37419977
RNA-Seq ExpressionCaUC09G178200
SyntenyCaUC09G178200
Gene Ontology termsGO:0048024 - regulation of mRNA splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR032377 - STAR protein, homodimerisation region
IPR036612 - K Homology domain, type 1 superfamily
IPR045071 - KH domain-containing BBP-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139764.1 KH domain-containing protein At5g56140 [Cucumis sativus]2.3e-15597.64Show/hide
Query:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
        MTSSA GMYMAFSPSPSAPHSPHLPGLRSPSSASAAA+LEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
Subjt:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG

Query:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
        GIFSNGGADMSAWPSRFQSEMSGLLQ SSAQNWL+SQG SSGLIVKRTIRVDVPV+ FPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
Subjt:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE

Query:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Subjt:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

XP_008447797.1 PREDICTED: KH domain-containing protein At5g56140 isoform X2 [Cucumis melo]2.0e-15497.3Show/hide
Query:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
        MTSSA GMYMAFSPSPSAPHSPHLPGLRSPSSASAAA+L   +YLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
Subjt:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG

Query:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
        GIFSNGGADMSAWPSRFQSEMSGLLQ SSAQNWLSSQG SSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
Subjt:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE

Query:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Subjt:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

XP_022139476.1 KH domain-containing protein At5g56140-like isoform X1 [Momordica charantia]4.0e-15596.62Show/hide
Query:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
        MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLL+QEILRVTTLLGKASVLGQSGLEHASPLASG
Subjt:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG

Query:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
        GIFSNGGADM+ WPSRFQSEMSGLLQPSSAQNWLSSQG SSGLIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
Subjt:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE

Query:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        EMMRGKPGYEHLNEPLHILVEAELPVEIIDARL+QA+EIL+DLLKP++ESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Subjt:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

XP_022976633.1 KH domain-containing protein At5g56140-like [Cucurbita maxima]1.0e-15094.33Show/hide
Query:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSS----ASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASP
        MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSS    A+AAALLEQEKYLSELLAERQKL PF+PVLP SYRLLNQEILRVTTLLGKASVLGQSGLEHASP
Subjt:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSS----ASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASP

Query:  LASGGIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKD
        LASGG+FSNGGADM+ WPSRFQSEMS LLQ S AQNWLSSQG SSGLIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKD
Subjt:  LASGGIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKD

Query:  PAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        PAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPM+ESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Subjt:  PAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

XP_038897899.1 KH domain-containing protein At5g56140 isoform X1 [Benincasa hispida]1.0e-15899.66Show/hide
Query:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
        MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
Subjt:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG

Query:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
        GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQG SSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
Subjt:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE

Query:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Subjt:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

TrEMBL top hitse value%identityAlignment
A0A0A0K3M6 KH domain-containing protein1.1e-15597.64Show/hide
Query:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
        MTSSA GMYMAFSPSPSAPHSPHLPGLRSPSSASAAA+LEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
Subjt:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG

Query:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
        GIFSNGGADMSAWPSRFQSEMSGLLQ SSAQNWL+SQG SSGLIVKRTIRVDVPV+ FPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
Subjt:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE

Query:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Subjt:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

A0A1S3BI94 KH domain-containing protein At5g56140 isoform X29.5e-15597.3Show/hide
Query:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
        MTSSA GMYMAFSPSPSAPHSPHLPGLRSPSSASAAA+L   +YLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
Subjt:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG

Query:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
        GIFSNGGADMSAWPSRFQSEMSGLLQ SSAQNWLSSQG SSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
Subjt:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE

Query:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Subjt:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

A0A1S4DWW8 KH domain-containing protein At5g56140 isoform X13.2e-15095.61Show/hide
Query:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
        MTSSA GMYMAFSPSPSAPHSPHLPGLRSPSSA         +YLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
Subjt:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG

Query:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
        GIFSNGGADMSAWPSRFQSEMSGLLQ SSAQNWLSSQG SSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
Subjt:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE

Query:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Subjt:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

A0A6J1CCS9 KH domain-containing protein At5g56140-like isoform X11.9e-15596.62Show/hide
Query:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
        MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLL+QEILRVTTLLGKASVLGQSGLEHASPLASG
Subjt:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG

Query:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
        GIFSNGGADM+ WPSRFQSEMSGLLQPSSAQNWLSSQG SSGLIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
Subjt:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE

Query:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        EMMRGKPGYEHLNEPLHILVEAELPVEIIDARL+QA+EIL+DLLKP++ESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Subjt:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

A0A6J1IMS3 KH domain-containing protein At5g56140-like4.9e-15194.33Show/hide
Query:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSS----ASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASP
        MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSS    A+AAALLEQEKYLSELLAERQKL PF+PVLP SYRLLNQEILRVTTLLGKASVLGQSGLEHASP
Subjt:  MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSS----ASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASP

Query:  LASGGIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKD
        LASGG+FSNGGADM+ WPSRFQSEMS LLQ S AQNWLSSQG SSGLIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKD
Subjt:  LASGGIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKD

Query:  PAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        PAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPM+ESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Subjt:  PAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

SwissProt top hitse value%identityAlignment
Q0WLR1 KH domain-containing protein At4g264805.6e-11273.83Show/hide
Query:  SAGGMYMAFSP----SPSAPHSPHLP-GLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLA
        S GG ++ + P     PSAP SP+   GLRS  S     L+EQEKYLSELLAER KL+PF+PVLP+  RL+NQEILRVTTLL  A  L QS  +H SPLA
Subjt:  SAGGMYMAFSP----SPSAPHSPHLP-GLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLA

Query:  SGGIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPA
        SGGIF N  ADM+ W S+F SE S  +  S A NWL+S G SSGLIVKRTIRVD+PVD +PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP 
Subjt:  SGGIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPA

Query:  REEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        +E+MMRGKPGYEHLNEPLHILVEAELP+EI+DARLMQAREIL+DLL P+EE+HDFYKKQQLRELA+LNG+LREEGSPMS S+SP+ NSLGMKRAKTRG
Subjt:  REEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

Q75GR5 KH domain-containing protein SPIN19.1e-7053Show/hide
Query:  LPGLRSPSSASAAALLEQ---------EKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASV--LGQSGLEHASPLASGGIFSN-GGADMS
        + GL SP  + A  L  Q          +YL+ELLAE QKL PFM VLP   +LL+QEI+RV++++         +      SP++S    SN  G   S
Subjt:  LPGLRSPSSASAAALLEQ---------EKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASV--LGQSGLEHASPLASGGIFSN-GGADMS

Query:  AWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEH
         W    Q  +       ++ +W  +    S  +VK+ +R+DVPVD++PN+NFVGR+LGPRGNSLKRVEAST CRV IRG+GSIKDP +E+ +RGKPGYEH
Subjt:  AWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEH

Query:  LNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKT
        L++PLHIL+EAE P  IIDARL  A+E++E+LLKP++ES DFYK+QQLRELAMLN TLRE+ SP   SVSPF N  GMKRAKT
Subjt:  LNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKT

Q8GYR4 KH domain-containing protein At3g086202.6e-6952.25Show/hide
Query:  YMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-
        Y  FSPS +A      P +R+PSS          +Y+S+LLAE QKL PFM VLP   RLLNQEI R+T ++          L H   SP+AS  + SN 
Subjt:  YMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-

Query:  GGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRG
         G  +  W       + G      A  W  +    S   VKR +R+D+PVD +PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +EE ++G
Subjt:  GGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRG

Query:  KPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKT
        KPGYEHLNE LHIL+EA+LP++I+D +L QA+EI+E+L+KP++ES D+ K+QQLRELA+LN  LRE     S SVSPF NS  MKR KT
Subjt:  KPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKT

Q9FKT4 KH domain-containing protein At5g561402.2e-11676.27Show/hide
Query:  GGMYMAFSPS----PSAPHSPHLP-GLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
        GG +M +S S    PSAP SP+   GLRS SS      +EQEKYLSELLAER KL+PF+PVLP+++RLLNQEILRVTTLL  A+VL QSGL+H SPLASG
Subjt:  GGMYMAFSPS----PSAPHSPHLP-GLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG

Query:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
        GIF N  ADM+ W S+F SE S  +  S   NWL+S G SSGLI KRTIRVD+PVDN+PN+NFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP +E
Subjt:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE

Query:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTR
        EMMRGKPGYEHLNEPLHILVEAELP+EI+DARLMQAREIL+DLL PMEE+HD YKKQQLRELA+LNGTLREEGSPMS SVSP+ NSLGMKRAKTR
Subjt:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTR

Q9ZVI3 KH domain-containing protein At2g386101.4e-6752.35Show/hide
Query:  SPSSASAAAL-----LEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-GGADMSAWPSRFQSE
        SP+ A++  +     ++  +YL+ELLAE QKL+PFM VLP   RLLNQE+ RV+ ++          L H   SP+AS  + SN     +  W    Q  
Subjt:  SPSSASAAAL-----LEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-GGADMSAWPSRFQSE

Query:  MSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        +SG   P    +W  + G  S   VKR +R+++PVDN+PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E+ +RG+PGYEHLNE LHIL+
Subjt:  MSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT
        EA+LP  I++ RL QA+EI+E+LLKP++ES DF K+QQLRELA+LN   LREE  G     SVSPF++S   KR KT
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT

Arabidopsis top hitse value%identityAlignment
AT2G38610.1 RNA-binding KH domain-containing protein1.0e-6852.35Show/hide
Query:  SPSSASAAAL-----LEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-GGADMSAWPSRFQSE
        SP+ A++  +     ++  +YL+ELLAE QKL+PFM VLP   RLLNQE+ RV+ ++          L H   SP+AS  + SN     +  W    Q  
Subjt:  SPSSASAAAL-----LEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-GGADMSAWPSRFQSE

Query:  MSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        +SG   P    +W  + G  S   VKR +R+++PVDN+PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E+ +RG+PGYEHLNE LHIL+
Subjt:  MSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT
        EA+LP  I++ RL QA+EI+E+LLKP++ES DF K+QQLRELA+LN   LREE  G     SVSPF++S   KR KT
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT

AT2G38610.2 RNA-binding KH domain-containing protein1.0e-6852.35Show/hide
Query:  SPSSASAAAL-----LEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-GGADMSAWPSRFQSE
        SP+ A++  +     ++  +YL+ELLAE QKL+PFM VLP   RLLNQE+ RV+ ++          L H   SP+AS  + SN     +  W    Q  
Subjt:  SPSSASAAAL-----LEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-GGADMSAWPSRFQSE

Query:  MSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        +SG   P    +W  + G  S   VKR +R+++PVDN+PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E+ +RG+PGYEHLNE LHIL+
Subjt:  MSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT
        EA+LP  I++ RL QA+EI+E+LLKP++ES DF K+QQLRELA+LN   LREE  G     SVSPF++S   KR KT
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT

AT3G08620.1 RNA-binding KH domain-containing protein1.9e-7052.25Show/hide
Query:  YMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-
        Y  FSPS +A      P +R+PSS          +Y+S+LLAE QKL PFM VLP   RLLNQEI R+T ++          L H   SP+AS  + SN 
Subjt:  YMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-

Query:  GGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRG
         G  +  W       + G      A  W  +    S   VKR +R+D+PVD +PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +EE ++G
Subjt:  GGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRG

Query:  KPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKT
        KPGYEHLNE LHIL+EA+LP++I+D +L QA+EI+E+L+KP++ES D+ K+QQLRELA+LN  LRE     S SVSPF NS  MKR KT
Subjt:  KPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKT

AT4G26480.1 RNA-binding KH domain-containing protein4.0e-11373.83Show/hide
Query:  SAGGMYMAFSP----SPSAPHSPHLP-GLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLA
        S GG ++ + P     PSAP SP+   GLRS  S     L+EQEKYLSELLAER KL+PF+PVLP+  RL+NQEILRVTTLL  A  L QS  +H SPLA
Subjt:  SAGGMYMAFSP----SPSAPHSPHLP-GLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLA

Query:  SGGIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPA
        SGGIF N  ADM+ W S+F SE S  +  S A NWL+S G SSGLIVKRTIRVD+PVD +PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP 
Subjt:  SGGIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPA

Query:  REEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
        +E+MMRGKPGYEHLNEPLHILVEAELP+EI+DARLMQAREIL+DLL P+EE+HDFYKKQQLRELA+LNG+LREEGSPMS S+SP+ NSLGMKRAKTRG
Subjt:  REEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

AT5G56140.1 RNA-binding KH domain-containing protein1.6e-11776.27Show/hide
Query:  GGMYMAFSPS----PSAPHSPHLP-GLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG
        GG +M +S S    PSAP SP+   GLRS SS      +EQEKYLSELLAER KL+PF+PVLP+++RLLNQEILRVTTLL  A+VL QSGL+H SPLASG
Subjt:  GGMYMAFSPS----PSAPHSPHLP-GLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASG

Query:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE
        GIF N  ADM+ W S+F SE S  +  S   NWL+S G SSGLI KRTIRVD+PVDN+PN+NFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP +E
Subjt:  GIFSNGGADMSAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE

Query:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTR
        EMMRGKPGYEHLNEPLHILVEAELP+EI+DARLMQAREIL+DLL PMEE+HD YKKQQLRELA+LNGTLREEGSPMS SVSP+ NSLGMKRAKTR
Subjt:  EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCGTCTGCAGGCGGGATGTACATGGCTTTCTCTCCCTCTCCTTCGGCTCCTCACTCTCCTCATCTTCCTGGTCTCCGCTCTCCGTCCTCTGCATCTGCTGCTGC
TCTACTTGAACAAGAAAAGTATCTCTCTGAGTTATTGGCAGAGCGACAGAAACTTAGTCCGTTTATGCCTGTGCTCCCTAATAGTTATCGCTTGCTGAACCAAGAAATAT
TGCGTGTAACCACACTATTGGGGAAGGCATCAGTTTTAGGTCAAAGTGGGCTTGAACATGCCAGCCCCCTGGCTTCTGGAGGAATATTTTCAAATGGAGGTGCTGACATG
AGTGCATGGCCATCACGGTTTCAATCAGAAATGTCAGGTTTATTACAACCCTCATCAGCACAAAATTGGCTAAGCTCCCAAGGTGGTTCATCAGGTCTTATTGTGAAGAG
AACCATCAGAGTAGATGTTCCTGTCGACAACTTCCCTAATTATAACTTTGTCGGCCGCCTCCTTGGACCTAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACTGATT
GTCGAGTTTTGATTAGAGGGCGTGGTAGCATTAAGGATCCAGCTAGGGAAGAAATGATGAGAGGAAAACCAGGTTATGAGCATTTGAATGAGCCTCTCCACATCCTAGTT
GAGGCGGAATTGCCAGTTGAAATTATTGATGCACGCCTTATGCAAGCCCGTGAGATTCTTGAGGACTTGCTCAAACCAATGGAAGAATCTCATGACTTCTACAAGAAGCA
ACAGCTACGGGAGCTAGCTATGCTTAATGGCACACTTCGTGAGGAGGGCTCACCTATGTCCAGTTCTGTGTCTCCCTTCCACAATAGCCTCGGAATGAAGAGAGCCAAAA
CTAGGGGCCAATGCCTTCACTGCAATCGGGGCACTCGCACTCTTTATGTGCAGGTCAAACCAGACAGTGAGCCTGAAGACGCTGCTGCTCGAACACCATTTTTGTGCCAA
GGTTTGAATCATCTAGTCCTTGTGCTTGAATTTGAAGCATCAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCGTCTGCAGGCGGGATGTACATGGCTTTCTCTCCCTCTCCTTCGGCTCCTCACTCTCCTCATCTTCCTGGTCTCCGCTCTCCGTCCTCTGCATCTGCTGCTGC
TCTACTTGAACAAGAAAAGTATCTCTCTGAGTTATTGGCAGAGCGACAGAAACTTAGTCCGTTTATGCCTGTGCTCCCTAATAGTTATCGCTTGCTGAACCAAGAAATAT
TGCGTGTAACCACACTATTGGGGAAGGCATCAGTTTTAGGTCAAAGTGGGCTTGAACATGCCAGCCCCCTGGCTTCTGGAGGAATATTTTCAAATGGAGGTGCTGACATG
AGTGCATGGCCATCACGGTTTCAATCAGAAATGTCAGGTTTATTACAACCCTCATCAGCACAAAATTGGCTAAGCTCCCAAGGTGGTTCATCAGGTCTTATTGTGAAGAG
AACCATCAGAGTAGATGTTCCTGTCGACAACTTCCCTAATTATAACTTTGTCGGCCGCCTCCTTGGACCTAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACTGATT
GTCGAGTTTTGATTAGAGGGCGTGGTAGCATTAAGGATCCAGCTAGGGAAGAAATGATGAGAGGAAAACCAGGTTATGAGCATTTGAATGAGCCTCTCCACATCCTAGTT
GAGGCGGAATTGCCAGTTGAAATTATTGATGCACGCCTTATGCAAGCCCGTGAGATTCTTGAGGACTTGCTCAAACCAATGGAAGAATCTCATGACTTCTACAAGAAGCA
ACAGCTACGGGAGCTAGCTATGCTTAATGGCACACTTCGTGAGGAGGGCTCACCTATGTCCAGTTCTGTGTCTCCCTTCCACAATAGCCTCGGAATGAAGAGAGCCAAAA
CTAGGGGCCAATGCCTTCACTGCAATCGGGGCACTCGCACTCTTTATGTGCAGGTCAAACCAGACAGTGAGCCTGAAGACGCTGCTGCTCGAACACCATTTTTGTGCCAA
GGTTTGAATCATCTAGTCCTTGTGCTTGAATTTGAAGCATCAATATAA
Protein sequenceShow/hide protein sequence
MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADM
SAWPSRFQSEMSGLLQPSSAQNWLSSQGGSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRGQCLHCNRGTRTLYVQVKPDSEPEDAAARTPFLCQ
GLNHLVLVLEFEASI