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CaUC10G181540 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G181540
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr10:2660405..2662086
RNA-Seq ExpressionCaUC10G181540
SyntenyCaUC10G181540
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050839.1 putative chloroplast RF68 [Cucumis melo var. makuwa]7.6e-4579.51Show/hide
Query:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPG
        PRTTRSP+SFWGDGGI             GP DLKKDLRVS+VGPGGFLNAFFFLLIGVISQ LAMVRKKGGTSTLG  ST +SCAMIYF GEVS SSPG
Subjt:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPG

Query:  WPSYAKEKNKRIEEASDSFMQA
        WPSYAKEKNKRI++ASDSFMQA
Subjt:  WPSYAKEKNKRIEEASDSFMQA

KAF4348549.1 hypothetical protein F8388_000228 [Cannabis sativa]1.0e-3353.67Show/hide
Query:  PARRAISSVVERAPDNCVVVPGLPRTTRSPLSFWGDGGIVPFEPFF--FMLFPEGPGDLKKD----LRVSRVG--PGGFLNAFFFLLIGVISQRLAMVRK
        P R  +    E   ++       PRTTRSPLSFWGDGGIVPFEP F  F    +  G  +K     +  S +G  P   L A     +G ISQ+LAMV K
Subjt:  PARRAISSVVERAPDNCVVVPGLPRTTRSPLSFWGDGGIVPFEPFF--FMLFPEGPGDLKKD----LRVSRVG--PGGFLNAFFFLLIGVISQRLAMVRK

Query:  KGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYG
        KGGTSTLGERSTTESC ++          P  P       KRIEEA DSFM APLGSGGYSSVGRAPLLQLGRCDYG
Subjt:  KGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYG

KAG6790056.1 hypothetical protein POTOM_006202 [Populus tomentosa]3.4e-3775Show/hide
Query:  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVG
        LKKDLRVS+VGP G L   FFLLIGVIS++LAMVRKKG TSTLGER+  +SCAMI+FT +V  SS GWPS AKEKN RI+EASDSF+ APL S GYS VG
Subjt:  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVG

Query:  RAPLLQLGRCDYGLDV
        RA  LQLGRCDYGLDV
Subjt:  RAPLLQLGRCDYGLDV

KZV53052.1 hypothetical protein F511_23525 [Dorcoceras hygrometricum]9.3e-3574.36Show/hide
Query:  GPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGY
        G   LKKDLRVSRVGPGG LNAFFFLLIGVISQ LA VRKKGGTSTLGERSTTE C +   +G    ++PG       K  RIEEASD FM APLGSGGY
Subjt:  GPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGY

Query:  SSVGRAPLLQLGRCDYG
        SSVGRAPLLQLGRCDYG
Subjt:  SSVGRAPLLQLGRCDYG

TYK08512.1 putative chloroplast RF68 [Cucumis melo var. makuwa]1.1e-4679.37Show/hide
Query:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPG
        PRTTRSP+SFWGDGGI             GP DLKKDLRVS+VGPGGFLNAFFFLLIGVISQ+LAMVRKKGGTSTLG  ST +SCAMIYF GEVS SSPG
Subjt:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPG

Query:  WPSYAKEKNKRIEEASDSFMQAPLGS
        WPSYAKEKNKRI++ASDSFMQA LGS
Subjt:  WPSYAKEKNKRIEEASDSFMQAPLGS

TrEMBL top hitse value%identityAlignment
A0A2Z7D0R2 Uncharacterized protein ycf684.5e-3574.36Show/hide
Query:  GPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGY
        G   LKKDLRVSRVGPGG LNAFFFLLIGVISQ LA VRKKGGTSTLGERSTTE C +   +G    ++PG       K  RIEEASD FM APLGSGGY
Subjt:  GPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGY

Query:  SSVGRAPLLQLGRCDYG
        SSVGRAPLLQLGRCDYG
Subjt:  SSVGRAPLLQLGRCDYG

A0A5A7UBD6 Uncharacterized protein ycf683.7e-4579.51Show/hide
Query:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPG
        PRTTRSP+SFWGDGGI             GP DLKKDLRVS+VGPGGFLNAFFFLLIGVISQ LAMVRKKGGTSTLG  ST +SCAMIYF GEVS SSPG
Subjt:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPG

Query:  WPSYAKEKNKRIEEASDSFMQA
        WPSYAKEKNKRI++ASDSFMQA
Subjt:  WPSYAKEKNKRIEEASDSFMQA

A0A5D3CB41 Uncharacterized protein ycf685.1e-4779.37Show/hide
Query:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPG
        PRTTRSP+SFWGDGGI             GP DLKKDLRVS+VGPGGFLNAFFFLLIGVISQ+LAMVRKKGGTSTLG  ST +SCAMIYF GEVS SSPG
Subjt:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPG

Query:  WPSYAKEKNKRIEEASDSFMQAPLGS
        WPSYAKEKNKRI++ASDSFMQA LGS
Subjt:  WPSYAKEKNKRIEEASDSFMQAPLGS

A0A6N2MWA8 Uncharacterized protein ycf684.2e-2533.16Show/hide
Query:  PYALGDTRATMAGTKGRDPARRA-----------------------------------------------------------------------------
        PYALGDTRATMAGTKGRDPAR A                                                                             
Subjt:  PYALGDTRATMAGTKGRDPARRA-----------------------------------------------------------------------------

Query:  -------PSGRPARRAISSVVERAPDNCVVVPGL-------------------------PRTTRSPL---------SFW------------------GDG
               P    ARRAISSVVERAPDNCVVVPGL                           TT +PL         S W                  GDG
Subjt:  -------PSGRPARRAISSVVERAPDNCVVVPGL-------------------------PRTTRSPL---------SFW------------------GDG

Query:  GIVPFEPFFFM--------------------------LFP--------------------------------------EGPGDLKKDLRVSRVGPGGFLN
        GIVPFEPFFFM                          LFP                                       G G LKKDLRVS+VGPGG LN
Subjt:  GIVPFEPFFFM--------------------------LFP--------------------------------------EGPGDLKKDLRVSRVGPGGFLN

Query:  AFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDY
        AFFFLLIGVIS+RLAMVRKK      GE++  ES       G      P  P       KRIEEASDSF+ APLGSG       A L++L  C++
Subjt:  AFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDY

A0A7J6DSE9 Uncharacterized protein ycf685.0e-3453.67Show/hide
Query:  PARRAISSVVERAPDNCVVVPGLPRTTRSPLSFWGDGGIVPFEPFF--FMLFPEGPGDLKKD----LRVSRVG--PGGFLNAFFFLLIGVISQRLAMVRK
        P R  +    E   ++       PRTTRSPLSFWGDGGIVPFEP F  F    +  G  +K     +  S +G  P   L A     +G ISQ+LAMV K
Subjt:  PARRAISSVVERAPDNCVVVPGLPRTTRSPLSFWGDGGIVPFEPFF--FMLFPEGPGDLKKD----LRVSRVG--PGGFLNAFFFLLIGVISQRLAMVRK

Query:  KGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYG
        KGGTSTLGERSTTESC ++          P  P       KRIEEA DSFM APLGSGGYSSVGRAPLLQLGRCDYG
Subjt:  KGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYG

SwissProt top hitse value%identityAlignment
P03938 Uncharacterized protein ycf681.0e-0775Show/hide
Query:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKK
        PRTTRSPLSFWGDGGIVPFEPFF       PG L+K
Subjt:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKK

Q6ENQ5 Uncharacterized protein ycf681.0e-0775Show/hide
Query:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKK
        PRTTRSPLSFWGDGGIVPFEPFF       PG L+K
Subjt:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKK

Q6L3C9 Uncharacterized protein ycf681.0e-0775Show/hide
Query:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKK
        PRTTRSPLSFWGDGGIVPFEPFF       PG L+K
Subjt:  PRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGCGGGCCCCCAGCGGGAGGCCCGCACG
ACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCG
TACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTT
TTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTGCGATGATTTACTT
CACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGG
GGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGCGGGCCCCCAGCGGGAGGCCCGCACG
ACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCG
TACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTT
TTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTGCGATGATTTACTT
CACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGG
GGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA
Protein sequenceShow/hide protein sequence
MTSSHHAPYALGDTRATMAGTKGRDPARRAPSGRPARRAISSVVERAPDNCVVVPGLPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFF
FLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGLDV