CuGenDBv2

Gene ID	CaUC10G181700
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Genome location	Ciama_Chr10:2703326..2705633
RNA-Seq Expression	CaUC10G181700
Synteny	CaUC10G181700
Gene Ontology terms	GO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process) GO:0009368 - endopeptidase Clp complex (cellular component) GO:0004176 - ATP-dependent peptidase activity (molecular function) GO:0004252 - serine-type endopeptidase activity (molecular function) GO:0051117 - ATPase binding (molecular function)
InterPro domains	IPR001907 - ATP-dependent Clp protease proteolytic subunit IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA IPR029045 - ClpP/crotonase-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAF3448243.1 hypothetical protein FNV43_RR08956 [Rhamnella rubrinervis]

1.1e-52

67.03

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        MRYVKPPIFTLCVGNAWGEAALLLA+GA+GNRSALPSSTIMIKQ                                    PIARF+GQATDIELAR+EV+
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        NVKAELVN               L AKH GKSTEE+EADIRRPKYFSPSEAVEYGIIDKVLYNER+TEDRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

XP_004147236.1 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucumis sativus]

1.1e-52

67.58

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        M YVKPPIFTLCVGNAWGEAALLLAAGA GNRSALPSSTIMIK+                                    PIARFQGQATD+E+AR+EVR
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        NVKAELV                LYAKH GKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

XP_008448778.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucumis melo]

1.8e-53

68.13

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQ                                    PIARFQGQATD+ELAR+EVR
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        NVKAELV                L+AKH GKSTEEIEADIRRPKYF+PSEAVEYGIIDKVLYNER TEDRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

XP_022155521.1 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Momordica charantia]

6.7e-53

68.13

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        MRYVKPPIFTLCVGNAWGEAALLLAAGA+GNRSALPSSTIM+KQ                                    PIARFQGQATDIELAR+EVR
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        NVKAELV                LYAKH GKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNER+ EDRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

XP_038902969.1 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Benincasa hispida]

2.7e-54

69.78

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQ                                    PIARFQGQATDIELAR+EVR
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        NVKAELV                LYAKH GKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNER TEDRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L232 ATP-dependent Clp protease proteolytic subunit

5.5e-53

67.58

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        M YVKPPIFTLCVGNAWGEAALLLAAGA GNRSALPSSTIMIK+                                    PIARFQGQATD+E+AR+EVR
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        NVKAELV                LYAKH GKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

A0A1S3BJW8 ATP-dependent Clp protease proteolytic subunit

8.5e-54

68.13

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQ                                    PIARFQGQATD+ELAR+EVR
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        NVKAELV                L+AKH GKSTEEIEADIRRPKYF+PSEAVEYGIIDKVLYNER TEDRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

A0A5A7THF6 ATP-dependent Clp protease proteolytic subunit

8.5e-54

68.13

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQ                                    PIARFQGQATD+ELAR+EVR
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        NVKAELV                L+AKH GKSTEEIEADIRRPKYF+PSEAVEYGIIDKVLYNER TEDRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

A0A6J1DRW9 ATP-dependent Clp protease proteolytic subunit

3.2e-53

68.13

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        MRYVKPPIFTLCVGNAWGEAALLLAAGA+GNRSALPSSTIM+KQ                                    PIARFQGQATDIELAR+EVR
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        NVKAELV                LYAKH GKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNER+ EDRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

D0EX73 ATP-dependent Clp protease proteolytic subunit

7.2e-53

67.58

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        MRYVKPPIFTLCVGNAWGEAALLLAAGA+GNRSALPSSTIM+KQ                                    PIARFQGQATDIELARREVR
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        NVK ELV                L+AKH GKSTE+IEADIRRPKYFSPSEAVEYGIIDKVLYNER+TEDRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

SwissProt top hits

e value

%identity

Alignment

A1JNN2 ATP-dependent Clp protease proteolytic subunit

1.5e-18

36.88

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        M+++KP + T+C+G A    A LL AGA+G R  LP+S +MI Q                                    P+  FQGQATDIE+  +E+ 
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKV
         VK+ + NE              L AKHTGKS EEIE D  R ++ S  EAVEYG++D V
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKV

Q5P161 ATP-dependent Clp protease proteolytic subunit

3.3e-18

35.58

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        M+++KP + TLC+G A    + LLAAG +G R  LP+S +MI Q                                    P+  FQGQA+DIE+  RE+ 
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYN
         ++A+L NE              + AKHTG+  E+IE D  R ++ S ++AVEYGI+DKVL N
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYN

Q60107 ATP-dependent Clp protease proteolytic subunit

1.5e-18

36.88

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        M+++KP + T+C+G A    A LL AGA+G R  LP+S +MI Q                                    P+  FQGQATDIE+  +E+ 
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKV
         VK+ + NE              L AKHTGKS EEIE D  R ++ S  EAVEYG++D V
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKV

Q6D827 ATP-dependent Clp protease proteolytic subunit

3.3e-18

36.2

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        M+++KP + T+C+G A    A LL AGA+G R  LP+S +MI Q                                    P+  FQGQATDIE+  +E+ 
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYN
         VKA++ NE              L AKHTG+  E IE D  R ++ S SEAVEYG++D V  N
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYN

Q8LB10 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic

1.2e-49

58.79

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        M YVKPPIFTLCVGNAWGEAALLL AGA+GNRSALPSSTIMIKQ                                    PIARFQGQATD+E+AR+E++
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        ++K E+V                LY+KH GKS E+IEAD++RPKYFSP+EAVEYGIIDKV+YNER ++DRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

Arabidopsis top hits

e value

%identity

Alignment

AT1G02560.1 nuclear encoded CLP protease 5

1.2e-12

31.9

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        MR+++P + T+CVG A    A LL+AG +G R +LP+S IMI Q                                    P+   QG  TDI++   E+ 
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYN
        + KA L   L               A HTG+S E+I  D  R  + S  EA EYG+ID V+ N
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYN

AT1G12410.1 CLP protease proteolytic subunit 2

4.2e-13

30.18

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        M+ +K P+ T CVG A+  A  LLAAG +G+R A+P S I ++                                     P    +GQA DI+   +E+ 
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATED
         ++  L NEL               AK+TG+  E +  D+ R K F+  EA+EYG+IDK++   R  ED
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATED

AT4G17040.1 CLP protease R subunit 4

8.7e-51

58.79

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        M YVKPPIFTLCVGNAWGEAALLL AGA+GNRSALPSSTIMIKQ                                    PIARFQGQATD+E+AR+E++
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI
        ++K E+V                LY+KH GKS E+IEAD++RPKYFSP+EAVEYGIIDKV+YNER ++DRGVVSDLKKAQLI
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

AT5G23140.1 nuclear-encoded CLP protease P7

3.2e-13

30.36

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        M+Y++ PI T+C+G A   A+LLLAAGA+G R +LP++T+MI Q                                    P   + GQA DI +  +++ 
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATE
         V  + +NE              LY KHTG+  + +  ++ R  + +P EA  +GIID+V+ +ER  E
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATE

AT5G45390.1 CLP protease P4

7.4e-10

28.57

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Query:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR
        ++ V+  + T+ +G A   A+++L AG +G R A+P++ IMI Q                                    P+    GQA D+E+  +EV 
Subjt:  MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVR

Query:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVL
        + K    N +T           ++ A  T +S E++  DI R +Y SP EAVEYG+ID V+
Subjt:  NVKAELVNELTVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGGTATGTTAAACCTCCTATATTCACATTATGCGTCGGTAATGCCTGGGGAGAAGCAGCACTTCTTCTGGCAGCTGGTGCTCAGGGAAACCGATCTGCGTTGCCCTC
ATCAACAATAATGATAAAGCAGGTATTCTATCAACAGATATCTTTACAATTATTTTCTCTCTACTCGTTTCCTAACTTCAGAAAGGTGTTAGTATTTTGCTTGGACTTGT
CTCACACTACATGTAAGCTGCCAATTGCAAGGTTTCAGGGTCAAGCAACAGACATTGAGCTTGCCAGAAGAGAAGTACGGAATGTGAAGGCAGAACTGGTAAATGAACTC
ACAGTTCTTTCCTTTTCAAAATCGATATTGAAGGTTACGCTTTATGCCAAGCATACTGGAAAGTCGACTGAGGAGATTGAAGCCGATATCAGGCGGCCAAAATATTTTAG
TCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTACTATACAACGAAAGAGCAACCGAGGACCGGGGAGTTGTATCTGACCTGAAAAAGGCACAACTTATTTAG

mRNA sequence

Show/hide mRNA sequence

CCCATAATCCCTTCATCCTCCCCTTCCTGTTTTTACGCTCTTGTTCTTTTTGAAAGAAAATGTTTGTCAACTCCAAGTTAGCGCAGAAAAATGATTATTAACCTTGGGAC
CTTTTCCATGTAATAGTAGATCATAATGAATTGCTTGCATTTTCCAGGGTGGCGAGAAGTTGGGCTATGAGACTGAAGCATTTGCGATATATGATGTTATGAGGTATGTT
AAACCTCCTATATTCACATTATGCGTCGGTAATGCCTGGGGAGAAGCAGCACTTCTTCTGGCAGCTGGTGCTCAGGGAAACCGATCTGCGTTGCCCTCATCAACAATAAT
GATAAAGCAGGTATTCTATCAACAGATATCTTTACAATTATTTTCTCTCTACTCGTTTCCTAACTTCAGAAAGGTGTTAGTATTTTGCTTGGACTTGTCTCACACTACAT
GTAAGCTGCCAATTGCAAGGTTTCAGGGTCAAGCAACAGACATTGAGCTTGCCAGAAGAGAAGTACGGAATGTGAAGGCAGAACTGGTAAATGAACTCACAGTTCTTTCC
TTTTCAAAATCGATATTGAAGGTTACGCTTTATGCCAAGCATACTGGAAAGTCGACTGAGGAGATTGAAGCCGATATCAGGCGGCCAAAATATTTTAGTCCCAGCGAAGC
AGTTGAATATGGTATCATAGATAAGGTACTATACAACGAAAGAGCAACCGAGGACCGGGGAGTTGTATCTGACCTGAAAAAGGCACAACTTATTTAGTGTAGAAAAATGT
GGATTGGTAAAATAATACCAAGATTGAAGGAAAGTTGTAGCATTCTGTTTTGCTCATCTTCAACCAAGAAACTCATGCCTTTTATGTGCTCTTCTGCTGTATCTTAAAGT
TTTTTCCCAATGTGCAGTGAAAATTCTTCCTTCTGGTGTAGAGGAACAATCTTTCAAAGTTTTAATTTATTAACTTGAACACATGGTTTATACGATGAATAAATATTAGT
CATTGCTACAAGCAAAGTTTGAAAAGCGGATGTTGATGGAAATGTCAAGGTCTCAATTTTATAGAA

Protein sequence

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MRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQVFYQQISLQLFSLYSFPNFRKVLVFCLDLSHTTCKLPIARFQGQATDIELARREVRNVKAELVNEL
TVLSFSKSILKVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

CaUC10G181700 (gene) of Watermelon (USVL246-FR2) v1 genome