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CaUC10G181790 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G181790
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionclassical arabinogalactan protein 9-like
Genome locationCiama_Chr10:2805005..2806005
RNA-Seq ExpressionCaUC10G181790
SyntenyCaUC10G181790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596882.1 hypothetical protein SDJN03_10062, partial [Cucurbita argyrosperma subsp. sororia]6.8e-1155.63Show/hide
Query:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGPMPDSPPSP
        MA ARAMLVLAL   AL SS+IAQ PS    PA+AAAP PSTP PVA P M+ PP ASPP  IS+         PPM ASPP M  SP   PMPDSPPS 
Subjt:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGPMPDSPPSP

Query:  PGPSSSPMSPPSPASAPSPPSPPPPGAGFSIHQGGYKAAVAAVLGGLAVVL
        P P                   P   AGFSIH GGYKA +AAVLGG+A VL
Subjt:  PGPSSSPMSPPSPASAPSPPSPPPPGAGFSIHQGGYKAAVAAVLGGLAVVL

XP_022923372.1 classical arabinogalactan protein 9-like [Cucurbita moschata]5.8e-3474.53Show/hide
Query:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPP------VASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGP--
        MA ARAMLVLALSLL+L +S+IAQSPSPAPGPA  AAPPP TPPPVA PP TPPP       ASPPPS+S PP AAPP +PP +ASPP MES P PGP  
Subjt:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPP------VASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGP--

Query:  MPDSPPSPPGPSSSPMSPPSPASAPSPPSPPPPGAGFSIHQGGYKAA-VAAVLGGLAVVLV
        MPDSPPSPPGPS  P   P+PASAPSPP  PPPGAGFSI  GGYKAA VAAVLGGLA+VLV
Subjt:  MPDSPPSPPGPSSSPMSPPSPASAPSPPSPPPPGAGFSIHQGGYKAA-VAAVLGGLAVVLV

XP_023553563.1 classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]5.8e-3475.93Show/hide
Query:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPP------VASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGP--
        MA ARAMLVLALSLL+L +S+IAQSPSPAPGPA  AAPPP TPPPVA PP TPPP       ASPPPS+S PP AAPP + P +ASPP MES P PGP  
Subjt:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPP------VASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGP--

Query:  MPDSPPSPPGPSSSPMSPPSPASAPS-PPSPPPPGAGFSIHQGGYKAA-VAAVLGGLAVVLV
        MPDSPPSPPGPS  P S PSPASAPS PPSPPPPGAGFSI  GGYKAA VAAVLGGLA+VLV
Subjt:  MPDSPPSPPGPSSSPMSPPSPASAPS-PPSPPPPGAGFSIHQGGYKAA-VAAVLGGLAVVLV

XP_032830222.1 basic proline-rich protein-like, partial [Petromyzon marinus]1.2e-0455.26Show/hide
Query:  PSSSIAQSPSPAPGPASAAAPPPST--PPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPMESS----PGPGPMPDSPPSPPGPSSSPMSPP
        PSS    SP P+P P+S+++PPPS+  PPP +PPP +PPP  S PPS   P +  PP+ PP  +SPPP  SS    P   P P SPPSPP PS  P SPP
Subjt:  PSSSIAQSPSPAPGPASAAAPPPST--PPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPMESS----PGPGPMPDSPPSPPGPSSSPMSPP

Query:  SPASAPSPPSPPPP
        SP   PSPPSPPPP
Subjt:  SPASAPSPPSPPPP

XP_038903480.1 classical arabinogalactan protein 9-like [Benincasa hispida]2.0e-4788.31Show/hide
Query:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGPMPDSPPSP
        MA+ARAMLVLALSLLAL SSSIAQSPSPAPGPASAAAPPPS+PPPVA PP TPPP ASPPP+IS PPAAAPPAIPPM+ASPP MESSPGPGPMPDSPPSP
Subjt:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGPMPDSPPSP

Query:  PGPSSSP--MSPPSPASAPSPPSPPPPGAGFSIHQGGYKAAVAAVLGGLAVVLV
        PGPS SP  MSPP+PA APSPPSPPPP AGFSIHQGGYKAA AAVLGGLAV LV
Subjt:  PGPSSSP--MSPPSPASAPSPPSPPPPGAGFSIHQGGYKAAVAAVLGGLAVVLV

TrEMBL top hitse value%identityAlignment
A0A0A0L458 Uncharacterized protein1.9e-3578.34Show/hide
Query:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPMESS--PGPGP-MPDSP
        MA+ARAMLVL LSLL+L SSSIAQSPSP+PGPAS AAPPPSTPPPVAPPP TPPP ASPP SIS PPAAAP A PPM+ASPPPME S  P PGP MP+ P
Subjt:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPMESS--PGPGP-MPDSP

Query:  PSPPGPSSSPMSP--PSPASAPSPPSPPPPGAGFSIHQGGYKAAVAAVLGGLAVVLV
        PSP  PS SPMSP  P+PA AP+PPS  P  AGFSIHQGGY A VAAVLGGLAVVLV
Subjt:  PSPPGPSSSPMSP--PSPASAPSPPSPPPPGAGFSIHQGGYKAAVAAVLGGLAVVLV

A0A6J1E5X6 classical arabinogalactan protein 9-like2.8e-3474.53Show/hide
Query:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPP------VASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGP--
        MA ARAMLVLALSLL+L +S+IAQSPSPAPGPA  AAPPP TPPPVA PP TPPP       ASPPPS+S PP AAPP +PP +ASPP MES P PGP  
Subjt:  MAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPP------VASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGP--

Query:  MPDSPPSPPGPSSSPMSPPSPASAPSPPSPPPPGAGFSIHQGGYKAA-VAAVLGGLAVVLV
        MPDSPPSPPGPS  P   P+PASAPSPP  PPPGAGFSI  GGYKAA VAAVLGGLA+VLV
Subjt:  MPDSPPSPPGPSSSPMSPPSPASAPSPPSPPPPGAGFSIHQGGYKAA-VAAVLGGLAVVLV

A0A7S2C4D7 Hypothetical protein (Fragment)6.7e-0450.86Show/hide
Query:  LSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGPMPDSPPSPPGPSSSPMS--
        L ++  P  S   SP P+P P+   +PPPS+PPP +PPP +PPP + PPP  S PP + PP +PP  + PPP    P P P    PPSPP PS  P S  
Subjt:  LSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPMESSPGPGPMPDSPPSPPGPSSSPMS--

Query:  PPSPASAPSPPSPPPP
        PPSP  AP PPSPPPP
Subjt:  PPSPASAPSPPSPPPP

Q4A2B5 Putative membrane protein8.7e-0450.43Show/hide
Query:  PSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPM------ESSPGPGPMPDSPPSPPGPSSSPMSPP
        P  S   SP P+P P+   +PPP TPPP APPP  PPP + PPP    PP + PP +PP    PPP+        SP P P P  PPSPP P+  P +PP
Subjt:  PSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISNPPAAAPPAIPPMIASPPPM------ESSPGPGPMPDSPPSPPGPSSSPMSPP

Query:  SPASAPS-PPSPPPP
         PA  PS PPSPPPP
Subjt:  SPASAPS-PPSPPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACACTCACAGGTAAGACTAGATTAGCCCTAAAACTTTCTCTCTTCTTTCCCTTTATATATGAATCCTCTTCCCCCATCTTCTCCCTCGCTTCAATCTTTCTCCT
TTTCCTGCTTCACTTTCTTCCAGCTATGGCTGCCGCACGTGCCATGCTCGTGCTCGCCCTATCTCTTCTTGCTCTTCCTTCCTCTTCCATTGCTCAATCTCCCTCCCCTG
CTCCAGGTCCCGCCTCCGCCGCCGCACCGCCGCCTTCAACCCCTCCGCCGGTTGCACCTCCCCCGATGACACCGCCCCCTGTAGCCTCACCACCGCCAAGCATCTCAAAT
CCACCGGCGGCGGCTCCTCCCGCCATCCCACCGATGATAGCTTCTCCACCGCCTATGGAATCGAGCCCAGGCCCAGGCCCAATGCCCGACAGCCCACCATCACCTCCAGG
CCCAAGTTCAAGCCCAATGTCTCCGCCGTCTCCAGCGTCAGCTCCGTCGCCGCCATCACCTCCGCCGCCGGGCGCGGGATTTTCTATCCACCAGGGTGGGTACAAGGCGG
CTGTTGCGGCGGTGTTGGGTGGCCTGGCCGTCGTCCTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
GTGAAACTTACGTATATCATTATAGGATCCATAAATATTAAAAAATTGAAATTTACAGCGTAAATGCAAAAAATTTAGTACCATCCTCTAAAAATAGAGTGACGTGTCCA
ATTTTATGTAGTGTAAGGGTAGGTAGCATGGAAAAATGAATACACTCACAGGTAAGACTAGATTAGCCCTAAAACTTTCTCTCTTCTTTCCCTTTATATATGAATCCTCT
TCCCCCATCTTCTCCCTCGCTTCAATCTTTCTCCTTTTCCTGCTTCACTTTCTTCCAGCTATGGCTGCCGCACGTGCCATGCTCGTGCTCGCCCTATCTCTTCTTGCTCT
TCCTTCCTCTTCCATTGCTCAATCTCCCTCCCCTGCTCCAGGTCCCGCCTCCGCCGCCGCACCGCCGCCTTCAACCCCTCCGCCGGTTGCACCTCCCCCGATGACACCGC
CCCCTGTAGCCTCACCACCGCCAAGCATCTCAAATCCACCGGCGGCGGCTCCTCCCGCCATCCCACCGATGATAGCTTCTCCACCGCCTATGGAATCGAGCCCAGGCCCA
GGCCCAATGCCCGACAGCCCACCATCACCTCCAGGCCCAAGTTCAAGCCCAATGTCTCCGCCGTCTCCAGCGTCAGCTCCGTCGCCGCCATCACCTCCGCCGCCGGGCGC
GGGATTTTCTATCCACCAGGGTGGGTACAAGGCGGCTGTTGCGGCGGTGTTGGGTGGCCTGGCCGTCGTCCTGGTTTAACACTTGAATTTGGTGTAGATTATTATTATTA
TGAGCTCCATACTCATTTGTGTATTCTTTTTTCTTTTTATTTCTTCATCATTTCCATCTCTTGAGAGCAGCCTGAGTGATATTTGTGGGATTTGTTAGCATTTTCATTTT
TTTTCTAGCTGAATAAGAGAGACTTGTTTCTTGTTCATGGTTTCATAATAATTTAGTCAATTATACATTTAATCCTAATACCCATCTATTAAGAGAGAGAAAAAAAAAAA
AAAAAAAAAAA
Protein sequenceShow/hide protein sequence
MNTLTGKTRLALKLSLFFPFIYESSSPIFSLASIFLLFLLHFLPAMAAARAMLVLALSLLALPSSSIAQSPSPAPGPASAAAPPPSTPPPVAPPPMTPPPVASPPPSISN
PPAAAPPAIPPMIASPPPMESSPGPGPMPDSPPSPPGPSSSPMSPPSPASAPSPPSPPPPGAGFSIHQGGYKAAVAAVLGGLAVVLV