CuGenDBv2

Gene ID	CaUC10G190220
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein ALTERED XYLOGLUCAN 4-like
Genome location	Ciama_Chr10:24282304..24282529
RNA-Seq Expression	CaUC10G190220
Synteny	CaUC10G190220
Gene Ontology terms	GO:0010411 - xyloglucan metabolic process (biological process) GO:0005794 - Golgi apparatus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016413 - O-acetyltransferase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8651242.1 hypothetical protein Csa_000903 [Cucumis sativus]

9.0e-17

73.77

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK
        ++ VETPED+YKD +   FRRWYFPKSEVTLM+LWTKFLVAGEER VNG GTG+F+LQ +K
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK

XP_004147443.2 protein ALTERED XYLOGLUCAN 4-like [Cucumis sativus]

9.0e-17

73.77

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK
        ++ VETPED+YKD +   FRRWYFPKSEVTLM+LWTKFLVAGEER VNG GTG+F+LQ +K
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK

XP_008443481.1 PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Cucumis melo]

1.8e-17

75.41

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK
        ++ VETPED+YKD +   FRRWYFPKSEVTLMMLWTKFLVAGEERV+NG GTG+F+LQ +K
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK

XP_022928160.1 protein ALTERED XYLOGLUCAN 4-like [Cucurbita moschata]

2.6e-16

61.97

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNKA-RRWLDATP
        ++ VETP+D+YKD +   FR WYFPKS++TL+MLWTKFLVAGEERVVNG GTG+F+LQ N+  + W    P
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNKA-RRWLDATP

XP_038903734.1 protein ALTERED XYLOGLUCAN 4-like [Benincasa hispida]

2.4e-17

81.03

Show/hide

Query:  VETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK
        VE+PED+YKD +   FRRWYFPKSEVTLMMLWTKFLVAGEERVVNG GTGIF+LQ +K
Subjt:  VETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFF0 PMR5N domain-containing protein

4.4e-17

73.77

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK
        ++ VETPED+YKD +   FRRWYFPKSEVTLM+LWTKFLVAGEER VNG GTG+F+LQ +K
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK

A0A1S3B8W3 protein ALTERED XYLOGLUCAN 4-like

8.8e-18

75.41

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK
        ++ VETPED+YKD +   FRRWYFPKSEVTLMMLWTKFLVAGEERV+NG GTG+F+LQ +K
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK

A0A5A7UF32 Protein ALTERED XYLOGLUCAN 4-like

8.8e-18

75.41

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK
        ++ VETPED+YKD +   FRRWYFPKSEVTLMMLWTKFLVAGEERV+NG GTG+F+LQ +K
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNK

A0A6J1EQW5 protein ALTERED XYLOGLUCAN 4-like

1.3e-16

61.97

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNKA-RRWLDATP
        ++ VETP+D+YKD +   FR WYFPKS++TL+MLWTKFLVAGEERVVNG GTG+F+LQ N+  + W    P
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNKA-RRWLDATP

A0A6J1JPH9 protein ALTERED XYLOGLUCAN 4-like

1.7e-16

61.97

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNKA-RRWLDATP
        ++ VETP+D+YKD +   FR WYFPKS++TL+MLWTKFLVAGEERVVNG GTG+F+LQ N+  + W    P
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNKA-RRWLDATP

SwissProt top hits

e value

%identity

Alignment

Q9LRS2 Protein ALTERED XYLOGLUCAN 4-like

5.5e-09

44.44

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLV-AGEERVVNGMGTGIFNLQVNKA-RRWLDATP
        +++ ETP+D+YKD +    R WYFPK + TL   WTKFLV   E R  N  GTG+F+L + K    W +  P
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLV-AGEERVVNGMGTGIFNLQVNKA-RRWLDATP

Arabidopsis top hits

e value

%identity

Alignment

AT1G70230.1 TRICHOME BIREFRINGENCE-LIKE 27

4.2e-04

37.5

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVN
        ++ V +P+ +Y++ +   FRRW F    VT+ + W+ FLVAG E+  N
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVN

AT3G28150.1 TRICHOME BIREFRINGENCE-LIKE 22

3.9e-10

44.44

Show/hide

Query:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLV-AGEERVVNGMGTGIFNLQVNKA-RRWLDATP
        +++ ETP+D+YKD +    R WYFPK + TL   WTKFLV   E R  N  GTG+F+L + K    W +  P
Subjt:  MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLV-AGEERVVNGMGTGIFNLQVNKA-RRWLDATP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATTTAGTAGAAACTCCAGAAGATATGTACAAAGACTTACAAAGGATAGGTTTTAGAAGATGGTATTTTCCAAAAAGTGAGGTAACCCTTATGATGCTTTGGACAAA
ATTCCTTGTGGCTGGGGAGGAGAGAGTTGTGAATGGAATGGGAACCGGCATTTTCAACCTACAAGTCAACAAAGCTCGACGATGGTTGGATGCAACACCTACCCGATATT
GA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNLVETPEDMYKDLQRIGFRRWYFPKSEVTLMMLWTKFLVAGEERVVNGMGTGIFNLQVNKARRWLDATPTRY

CaUC10G190220 (gene) of Watermelon (USVL246-FR2) v1 genome