; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC10G190440 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G190440
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionF-box domain-containing protein
Genome locationCiama_Chr10:24511738..24512538
RNA-Seq ExpressionCaUC10G190440
SyntenyCaUC10G190440
Gene Ontology termsNA
InterPro domainsIPR011043 - Galactose oxidase/kelch, beta-propeller
IPR013187 - F-box associated domain, type 3
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59658.1 hypothetical protein Csa_001357 [Cucumis sativus]2.3e-3339.85Show/hide
Query:  YGFGFSPNTKQYKIV-----RIPRVTTN-------GLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGSLVVGRVNSHCLLCFDV
        +GFG+SPN KQYKIV     +IP + ++         +VA+IFT         GKW   + +P   +  + G YLNG LYW          +  LL FDV
Subjt:  YGFGFSPNTKQYKIV-----RIPRVTTN-------GLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGSLVVGRVNSHCLLCFDV

Query:  EHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFE-SCWDFHVWKMMEQDCSWTK---EFVVPLLFHPR-----AYYSRDYMISKFYHLQFIK
        E E FE + FP V R  D  L+S   I +FN +LY+S FD +     FHVWKMME+D SW K   +F +              Y RDYMI    H Q IK
Subjt:  EHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFE-SCWDFHVWKMMEQDCSWTK---EFVVPLLFHPR-----AYYSRDYMISKFYHLQFIK

Query:  AFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNILGLD
         FED   LF + Q  LILYD K  + EA+  +L    + KL I+E+DS NF S+   LG++
Subjt:  AFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNILGLD

KGN59660.1 hypothetical protein Csa_001105 [Cucumis sativus]1.0e-4141.16Show/hide
Query:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGHLYWIG---
        +TNEY+E+P  D      +    + +GFG+SPN KQYKIV++  +   GL+VADIFT  T    S GKW+ V I+  F  +G  DG YLNG LYW G   
Subjt:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGHLYWIG---

Query:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPDGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---
          L +       LL FDVE E FE + FP GV    D        I +FN +LYLS FDF +      FHVWK+ME+  SW K   EFV+  P+  H   
Subjt:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPDGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---

Query:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELD-SFNFGSIPNILGLD
                    R YY      ++ YH Q IK FED K LF + +  LILYD KT++ E   + L    + KLWIY++D S N  S+P  LG++
Subjt:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELD-SFNFGSIPNILGLD

XP_004135796.1 putative F-box protein At1g46984 [Cucumis sativus]3.3e-3238.95Show/hide
Query:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGS--L
        +TNEY ++PT   + +   R+ ++ YG GFSP T QYK+ R     T+  F+ DIF F T  +C   +WT V  +P   +    G YLNG LYW+GS  L
Subjt:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGS--L

Query:  VVGRVNSHCLLCF--DVEHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYS-RDYMIS
          G ++ +  + +  D++ E FE+I FP  G            I V+NG+LYL+ F  E  +D+H WK ME+D SW+KEFV+ L      ++S R + I 
Subjt:  VVGRVNSHCLLCF--DVEHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYS-RDYMIS

Query:  KFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNIL
          Y+LQ IK  EDG  L     + LILYDP T+  E L ++ +  I+E +W+++++SF+F S+ NIL
Subjt:  KFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNIL

XP_011652871.1 F-box/kelch-repeat protein At3g06240 [Cucumis sativus]1.0e-4141.16Show/hide
Query:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGHLYWIG---
        +TNEY+E+P  D      +    + +GFG+SPN KQYKIV++  +   GL+VADIFT  T    S GKW+ V I+  F  +G  DG YLNG LYW G   
Subjt:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGHLYWIG---

Query:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPDGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---
          L +       LL FDVE E FE + FP GV    D        I +FN +LYLS FDF +      FHVWK+ME+  SW K   EFV+  P+  H   
Subjt:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPDGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---

Query:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELD-SFNFGSIPNILGLD
                    R YY      ++ YH Q IK FED K LF + +  LILYD KT++ E   + L    + KLWIY++D S N  S+P  LG++
Subjt:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELD-SFNFGSIPNILGLD

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]8.6e-3339.85Show/hide
Query:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGSLVV
        MTNEY ++PT     +    +  + YG GFSP TKQYK+ R   V     F+ +IF F T  +C   +WT V  +P+  +    G Y NG LYW+G   +
Subjt:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGSLVV

Query:  GRVN-SHCLLCFDVEHENFEEICFPGVGRQPDGTLVSCFE-IQVFNGSLYLSGFDFESCWDF--HVWKMMEQDCSWTKEFVVPLLFHPRAYYSRDYMISK
             S  +   D+E + F++I FP      DG     F  I V+N +LYL+      C DF  HVWK ME+D SW KEFV+ L  +      R + I  
Subjt:  GRVN-SHCLLCFDVEHENFEEICFPGVGRQPDGTLVSCFE-IQVFNGSLYLSGFDFESCWDF--HVWKMMEQDCSWTKEFVVPLLFHPRAYYSRDYMISK

Query:  FYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNIL
         Y LQ IKA EDG  L     + LILYDPKT+ TE L  + +  I++ +W+Y++DSFNF S+ NIL
Subjt:  FYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNIL

TrEMBL top hitse value%identityAlignment
A0A0A0LCB8 F-box domain-containing protein4.9e-4241.16Show/hide
Query:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGHLYWIG---
        +TNEY+E+P  D      +    + +GFG+SPN KQYKIV++  +   GL+VADIFT  T    S GKW+ V I+  F  +G  DG YLNG LYW G   
Subjt:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGHLYWIG---

Query:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPDGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---
          L +       LL FDVE E FE + FP GV    D        I +FN +LYLS FDF +      FHVWK+ME+  SW K   EFV+  P+  H   
Subjt:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPDGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---

Query:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELD-SFNFGSIPNILGLD
                    R YY      ++ YH Q IK FED K LF + +  LILYD KT++ E   + L    + KLWIY++D S N  S+P  LG++
Subjt:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELD-SFNFGSIPNILGLD

A0A0A0LCZ3 F-box domain-containing protein1.1e-3339.85Show/hide
Query:  YGFGFSPNTKQYKIV-----RIPRVTTN-------GLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGSLVVGRVNSHCLLCFDV
        +GFG+SPN KQYKIV     +IP + ++         +VA+IFT         GKW   + +P   +  + G YLNG LYW          +  LL FDV
Subjt:  YGFGFSPNTKQYKIV-----RIPRVTTN-------GLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGSLVVGRVNSHCLLCFDV

Query:  EHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFE-SCWDFHVWKMMEQDCSWTK---EFVVPLLFHPR-----AYYSRDYMISKFYHLQFIK
        E E FE + FP V R  D  L+S   I +FN +LY+S FD +     FHVWKMME+D SW K   +F +              Y RDYMI    H Q IK
Subjt:  EHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFE-SCWDFHVWKMMEQDCSWTK---EFVVPLLFHPR-----AYYSRDYMISKFYHLQFIK

Query:  AFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNILGLD
         FED   LF + Q  LILYD K  + EA+  +L    + KL I+E+DS NF S+   LG++
Subjt:  AFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNILGLD

A0A0A0M1M5 F-box domain-containing protein1.6e-3238.95Show/hide
Query:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGS--L
        +TNEY ++PT   + +   R+ ++ YG GFSP T QYK+ R     T+  F+ DIF F T  +C   +WT V  +P   +    G YLNG LYW+GS  L
Subjt:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGS--L

Query:  VVGRVNSHCLLCF--DVEHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYS-RDYMIS
          G ++ +  + +  D++ E FE+I FP  G            I V+NG+LYL+ F  E  +D+H WK ME+D SW+KEFV+ L      ++S R + I 
Subjt:  VVGRVNSHCLLCF--DVEHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYS-RDYMIS

Query:  KFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNIL
          Y+LQ IK  EDG  L     + LILYDP T+  E L ++ +  I+E +W+++++SF+F S+ NIL
Subjt:  KFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNIL

A0A5D3CIX9 Putative F-box protein3.1e-2834.83Show/hide
Query:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGS---
        +TNEY + P +        ++ ++ YG GFSP T QYK+ R      +  F+ DIF F T  +C   +WT +  +P   +    G Y NG LYW+GS   
Subjt:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGS---

Query:  LVVGRVNSHCLLCF--DVEHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYSRDYMIS
        L  G ++ +  + +  D+  E F++I  P  G +P         + V+NG+LYL+    +  +D+HVWKM E D SW+KEFV+ L  +      R + I 
Subjt:  LVVGRVNSHCLLCF--DVEHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYSRDYMIS

Query:  KFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNIL
          Y+LQ +K  EDG  L     + LI+YDPKT++ E L  + +  I+E +W ++++SF+F S+ N L
Subjt:  KFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNIL

A0A6J1CQE2 F-box/kelch-repeat protein At3g06240-like1.8e-2837.78Show/hide
Query:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGSLVV
        MTNEY + P      N      ++ Y FGFSP TKQYK+VR          + + FTF T   C   K T VS +P +        Y NG LYWIG  + 
Subjt:  MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGSLVV

Query:  GRVNSHCLLCFDVEHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPL----LFHPRAYYSRDYMISK
           N   L   D+E E  +EI FP  G         C  I VFNGSLYL+         +HVWK ME+D SWTK F V L    + H R Y S+      
Subjt:  GRVNSHCLLCFDVEHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPL----LFHPRAYYSRDYMISK

Query:  FYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNILGLDS
           LQ I+A +DGK L  +  ++LILY+ KT++ E+L ++ +  I++   ++ +DSFNF S+  IL  D+
Subjt:  FYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNILGLDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAATGAGTACATGGAAGTTCCTACCGTCGATTGTGCTATGAATTTTGATCATCGCATGCATCACCACGGCTACGGATTTGGTTTTAGTCCCAACACAAAACAATA
CAAAATAGTTAGAATTCCTAGAGTGACAACAAATGGATTATTTGTAGCAGATATTTTTACATTTGACACACTTGGAACATGTAGTATTGGAAAATGGACTAGTGTTTCCA
TTATGCCGTTTACTACTATTGGCCGGAACGATGGTTTTTACTTGAATGGACATCTTTATTGGATTGGAAGTCTTGTTGTTGGTCGTGTTAATAGTCATTGCCTTCTATGT
TTTGATGTAGAACATGAGAATTTTGAAGAAATTTGTTTTCCCGGAGTTGGCCGGCAACCCGATGGAACATTAGTTTCTTGTTTTGAAATTCAAGTATTTAATGGCAGCCT
CTATCTCTCTGGTTTCGACTTTGAAAGTTGTTGGGACTTCCATGTGTGGAAGATGATGGAACAAGATTGTTCATGGACTAAAGAATTTGTTGTCCCATTACTCTTTCATC
CGAGGGCTTATTATTCTAGAGATTATATGATTAGTAAATTTTATCATCTCCAATTCATCAAAGCTTTTGAAGATGGAAAGTTCTTGTTTGCTGTTTTCCAAATGGAATTA
ATCTTGTATGATCCCAAGACCAAGAAGACAGAAGCATTGGATCATAAACTATATCATGGAATAGAGGAAAAATTATGGATTTATGAACTTGATTCCTTTAATTTTGGATC
TATCCCAAACATTTTAGGGTTAGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAATGAGTACATGGAAGTTCCTACCGTCGATTGTGCTATGAATTTTGATCATCGCATGCATCACCACGGCTACGGATTTGGTTTTAGTCCCAACACAAAACAATA
CAAAATAGTTAGAATTCCTAGAGTGACAACAAATGGATTATTTGTAGCAGATATTTTTACATTTGACACACTTGGAACATGTAGTATTGGAAAATGGACTAGTGTTTCCA
TTATGCCGTTTACTACTATTGGCCGGAACGATGGTTTTTACTTGAATGGACATCTTTATTGGATTGGAAGTCTTGTTGTTGGTCGTGTTAATAGTCATTGCCTTCTATGT
TTTGATGTAGAACATGAGAATTTTGAAGAAATTTGTTTTCCCGGAGTTGGCCGGCAACCCGATGGAACATTAGTTTCTTGTTTTGAAATTCAAGTATTTAATGGCAGCCT
CTATCTCTCTGGTTTCGACTTTGAAAGTTGTTGGGACTTCCATGTGTGGAAGATGATGGAACAAGATTGTTCATGGACTAAAGAATTTGTTGTCCCATTACTCTTTCATC
CGAGGGCTTATTATTCTAGAGATTATATGATTAGTAAATTTTATCATCTCCAATTCATCAAAGCTTTTGAAGATGGAAAGTTCTTGTTTGCTGTTTTCCAAATGGAATTA
ATCTTGTATGATCCCAAGACCAAGAAGACAGAAGCATTGGATCATAAACTATATCATGGAATAGAGGAAAAATTATGGATTTATGAACTTGATTCCTTTAATTTTGGATC
TATCCCAAACATTTTAGGGTTAGATTCTTGA
Protein sequenceShow/hide protein sequence
MTNEYMEVPTVDCAMNFDHRMHHHGYGFGFSPNTKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGHLYWIGSLVVGRVNSHCLLC
FDVEHENFEEICFPGVGRQPDGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMEL
ILYDPKTKKTEALDHKLYHGIEEKLWIYELDSFNFGSIPNILGLDS