; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC10G190460 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G190460
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionF-box domain-containing protein
Genome locationCiama_Chr10:24519609..24520394
RNA-Seq ExpressionCaUC10G190460
SyntenyCaUC10G190460
Gene Ontology termsNA
InterPro domainsIPR006527 - F-box associated domain, type 1
IPR011043 - Galactose oxidase/kelch, beta-propeller
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59658.1 hypothetical protein Csa_001357 [Cucumis sativus]4.3e-5349.13Show/hide
Query:  MTNEYVELPINNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIR-------------NGLYVVDIFTIGSFTRSSSGKW--SRVPFMPFFVFGCKDGVYLNG
        MTNE  EL +NNS   Y G S+GFG+S N K YKIVKLS+I+                YV +IFTIG F R   GKW  +RVP +         GVYLNG
Subjt:  MTNEYVELPINNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIR-------------NGLYVVDIFTIGSFTRSSSGKW--SRVPFMPFFVFGCKDGVYLNG

Query:  YLYWHGYYRNIRNRGRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKM--EQDSWFK---EFVIPLPI
         LYW  Y     N  R +  + VLLRFDVEDEKF+ VSFP   +D AF  SS+IWIFNN LY+S  +     G FHVWKM  E  SW K   +F I   I
Subjt:  YLYWHGYYRNIRNRGRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKM--EQDSWFK---EFVIPLPI

Query:  DSVLHYPINYYDVSTSYL----FQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEIDSFNFGSLPKTLGL
            H+ +        Y+    FQLIKVFED  ML ++S + LILYDSK  Q EA++D+LN    G+LCIHEIDS NF SL KTLG+
Subjt:  DSVLHYPINYYDVSTSYL----FQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEIDSFNFGSLPKTLGL

KGN59660.1 hypothetical protein Csa_001105 [Cucumis sativus]2.3e-7056.36Show/hide
Query:  MTNEYVELPINNS--TMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFM-PFFVFGCKDGVYLNGYLYWHGY---YR
        +TNEYVELP+N++     Y+GYS+GFG+S N K YKIVKLS IR GLYV DIFTIG+FTR S GKWSRVP +  F V G  DGVYLNG LYW+GY   Y 
Subjt:  MTNEYVELPINNS--TMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFM-PFFVFGCKDGVYLNGYLYWHGY---YR

Query:  NIRNRGRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKS--GEFHVWKMEQD--SWFK---EFVIPLPID------
        ++RN G+     +VLLRFDVEDEKF+ VSFP   +D  F  SS+IWIFNN LYLSC + +  +  G FHVWK+ ++  SWFK   EFVI  PI       
Subjt:  NIRNRGRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKS--GEFHVWKMEQD--SWFK---EFVIPLPID------

Query:  SVLHY-----PINYYDVSTS---YLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEID-SFNFGSLPKTLGL
        ++LHY        YYD S+S   Y FQLIKVFED KML ++S K LILYDSKT+Q E   + LN    G+L I++ID S N  SLPKTLG+
Subjt:  SVLHY-----PINYYDVSTS---YLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEID-SFNFGSLPKTLGL

XP_004135796.1 putative F-box protein At1g46984 [Cucumis sativus]3.2e-3238.49Show/hide
Query:  MTNEYVELPINNST-MLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNR
        +TNEY +LP + S       Y YG GFS  T  YK+ +     +  ++VDIF  G     +S +W+ V  +P F+     GVYLNG LYW G  +     
Subjt:  MTNEYVELPINNST-MLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNR

Query:  GRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPLPID---SVLHYPINYYDVST
        G   D   V+ R D++DEKF+++SFP +G D       +I ++N  LYL+     F   ++H WKME+D SW KEFV+ LP +   S+ H+PI YY    
Subjt:  GRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPLPID---SVLHYPINYYDVST

Query:  SYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEAL-NDKLNHHGRLCIHEIDSFNFGSLPKTL
            QLIK  EDG +LC+ +   LILYD  T+  E L N        + +H+I+SF+F SL   L
Subjt:  SYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEAL-NDKLNHHGRLCIHEIDSFNFGSLPKTL

XP_011652871.1 F-box/kelch-repeat protein At3g06240 [Cucumis sativus]2.3e-7056.36Show/hide
Query:  MTNEYVELPINNS--TMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFM-PFFVFGCKDGVYLNGYLYWHGY---YR
        +TNEYVELP+N++     Y+GYS+GFG+S N K YKIVKLS IR GLYV DIFTIG+FTR S GKWSRVP +  F V G  DGVYLNG LYW+GY   Y 
Subjt:  MTNEYVELPINNS--TMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFM-PFFVFGCKDGVYLNGYLYWHGY---YR

Query:  NIRNRGRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKS--GEFHVWKMEQD--SWFK---EFVIPLPID------
        ++RN G+     +VLLRFDVEDEKF+ VSFP   +D  F  SS+IWIFNN LYLSC + +  +  G FHVWK+ ++  SWFK   EFVI  PI       
Subjt:  NIRNRGRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKS--GEFHVWKMEQD--SWFK---EFVIPLPID------

Query:  SVLHY-----PINYYDVSTS---YLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEID-SFNFGSLPKTLGL
        ++LHY        YYD S+S   Y FQLIKVFED KML ++S K LILYDSKT+Q E   + LN    G+L I++ID S N  SLPKTLG+
Subjt:  SVLHY-----PINYYDVSTS---YLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEID-SFNFGSLPKTLGL

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]1.4e-3540.08Show/hide
Query:  MTNEYVELP-INNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNR
        MTNEY +LP   +       Y YG GFS  TK YK+ +   + +  ++V+IF  G     +S +W+ V  +P+F+     GVY NG LYW G  + + N 
Subjt:  MTNEYVELP-INNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNR

Query:  GRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPLPIDSVLHYPINYYDVSTSYL
        G    +  V+ R D+ED+KF+Q+SFP +G D    P  +I ++N+ LYL+     F   E+HVWKME+D SW KEFV+ LP ++V H    ++ +   Y 
Subjt:  GRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPLPIDSVLHYPINYYDVSTSYL

Query:  FQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDK-LNHHGRLCIHEIDSFNFGSLPKTL
         QLIK  EDG +LC+ +   LILYD KT+ TE L D+       + +++IDSFNF SL   L
Subjt:  FQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDK-LNHHGRLCIHEIDSFNFGSLPKTL

TrEMBL top hitse value%identityAlignment
A0A0A0LCB8 F-box domain-containing protein1.1e-7056.36Show/hide
Query:  MTNEYVELPINNS--TMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFM-PFFVFGCKDGVYLNGYLYWHGY---YR
        +TNEYVELP+N++     Y+GYS+GFG+S N K YKIVKLS IR GLYV DIFTIG+FTR S GKWSRVP +  F V G  DGVYLNG LYW+GY   Y 
Subjt:  MTNEYVELPINNS--TMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFM-PFFVFGCKDGVYLNGYLYWHGY---YR

Query:  NIRNRGRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKS--GEFHVWKMEQD--SWFK---EFVIPLPID------
        ++RN G+     +VLLRFDVEDEKF+ VSFP   +D  F  SS+IWIFNN LYLSC + +  +  G FHVWK+ ++  SWFK   EFVI  PI       
Subjt:  NIRNRGRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKS--GEFHVWKMEQD--SWFK---EFVIPLPID------

Query:  SVLHY-----PINYYDVSTS---YLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEID-SFNFGSLPKTLGL
        ++LHY        YYD S+S   Y FQLIKVFED KML ++S K LILYDSKT+Q E   + LN    G+L I++ID S N  SLPKTLG+
Subjt:  SVLHY-----PINYYDVSTS---YLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEID-SFNFGSLPKTLGL

A0A0A0LCZ3 F-box domain-containing protein2.1e-5349.13Show/hide
Query:  MTNEYVELPINNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIR-------------NGLYVVDIFTIGSFTRSSSGKW--SRVPFMPFFVFGCKDGVYLNG
        MTNE  EL +NNS   Y G S+GFG+S N K YKIVKLS+I+                YV +IFTIG F R   GKW  +RVP +         GVYLNG
Subjt:  MTNEYVELPINNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIR-------------NGLYVVDIFTIGSFTRSSSGKW--SRVPFMPFFVFGCKDGVYLNG

Query:  YLYWHGYYRNIRNRGRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKM--EQDSWFK---EFVIPLPI
         LYW  Y     N  R +  + VLLRFDVEDEKF+ VSFP   +D AF  SS+IWIFNN LY+S  +     G FHVWKM  E  SW K   +F I   I
Subjt:  YLYWHGYYRNIRNRGRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKM--EQDSWFK---EFVIPLPI

Query:  DSVLHYPINYYDVSTSYL----FQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEIDSFNFGSLPKTLGL
            H+ +        Y+    FQLIKVFED  ML ++S + LILYDSK  Q EA++D+LN    G+LCIHEIDS NF SL KTLG+
Subjt:  DSVLHYPINYYDVSTSYL----FQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEIDSFNFGSLPKTLGL

A0A0A0M1M5 F-box domain-containing protein1.6e-3238.49Show/hide
Query:  MTNEYVELPINNST-MLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNR
        +TNEY +LP + S       Y YG GFS  T  YK+ +     +  ++VDIF  G     +S +W+ V  +P F+     GVYLNG LYW G  +     
Subjt:  MTNEYVELPINNST-MLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNR

Query:  GRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPLPID---SVLHYPINYYDVST
        G   D   V+ R D++DEKF+++SFP +G D       +I ++N  LYL+     F   ++H WKME+D SW KEFV+ LP +   S+ H+PI YY    
Subjt:  GRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPLPID---SVLHYPINYYDVST

Query:  SYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEAL-NDKLNHHGRLCIHEIDSFNFGSLPKTL
            QLIK  EDG +LC+ +   LILYD  T+  E L N        + +H+I+SF+F SL   L
Subjt:  SYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEAL-NDKLNHHGRLCIHEIDSFNFGSLPKTL

A0A1S3BQV8 putative F-box protein At3g211201.3e-3136.7Show/hide
Query:  MTNEYVELP-INNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNR
        +TNEY + P +         Y YG GFS  T  YK+ +     N  ++VDIF  G     +S +W+ +  +P F+     GVY NG LYW G  + + N 
Subjt:  MTNEYVELP-INNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNR

Query:  GRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPLPIDSVL-----HYPINYYDV
        G   D   V+ R D+ DEKF+++S P  G +       ++ ++N  LYL+   L  +  ++HVWKM++D SW KEFV+ LP +++L     H+PI YY  
Subjt:  GRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPLPIDSVL-----HYPINYYDV

Query:  STSYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDK-LNHHGRLCIHEIDSFNFGSLPKTL
              QL+K  EDG +LC+ +   LI+YD KT+Q E L D+       +  H+I+SF+F SL  TL
Subjt:  STSYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDK-LNHHGRLCIHEIDSFNFGSLPKTL

A0A5D3CIX9 Putative F-box protein1.3e-3136.7Show/hide
Query:  MTNEYVELP-INNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNR
        +TNEY + P +         Y YG GFS  T  YK+ +     N  ++VDIF  G     +S +W+ +  +P F+     GVY NG LYW G  + + N 
Subjt:  MTNEYVELP-INNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNR

Query:  GRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPLPIDSVL-----HYPINYYDV
        G   D   V+ R D+ DEKF+++S P  G +       ++ ++N  LYL+   L  +  ++HVWKM++D SW KEFV+ LP +++L     H+PI YY  
Subjt:  GRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPLPIDSVL-----HYPINYYDV

Query:  STSYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDK-LNHHGRLCIHEIDSFNFGSLPKTL
              QL+K  EDG +LC+ +   LI+YD KT+Q E L D+       +  H+I+SF+F SL  TL
Subjt:  STSYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDK-LNHHGRLCIHEIDSFNFGSLPKTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAATGAGTACGTGGAACTCCCAATTAATAATTCTACGATGCTTTACTCGGGCTACAGCTACGGATTTGGTTTTAGCTCCAACACAAAACACTACAAAATAGTTAA
ACTTTCTGTAATAAGAAATGGGTTATATGTAGTGGATATTTTTACAATTGGTTCATTTACCCGAAGTAGTTCTGGAAAATGGAGTAGGGTTCCGTTCATGCCGTTTTTTG
TTTTTGGTTGTAAAGATGGTGTTTACTTGAATGGATATCTTTATTGGCATGGATACTACCGTAATATTAGAAACCGAGGTAGGGATATGGATATGGATATGGTTCTTTTA
CGTTTTGACGTAGAAGATGAGAAATTTCAACAAGTTTCTTTTCCCCCAAATGGGCAAGATGGAGCTTTTCATCCTTCTTCCCATATTTGGATCTTTAATAACAACCTCTA
TCTCTCTTGTTTGAACTTACATTTTAAGAGTGGTGAGTTCCATGTGTGGAAGATGGAGCAAGATTCGTGGTTTAAAGAATTTGTTATTCCACTGCCCATTGATTCAGTGC
TGCATTATCCTATAAACTACTATGATGTGAGTACTTCATATCTCTTCCAACTCATCAAAGTTTTTGAAGATGGAAAGATGTTGTGTGTTGTTTCTAGCAAGGATTTAATT
TTATACGACTCCAAGACCAAGCAGACAGAGGCGTTGAATGATAAGCTAAATCACCACGGAAGATTATGTATTCATGAAATTGATTCATTCAATTTTGGTTCTCTTCCAAA
GACTTTGGGACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAATGAGTACGTGGAACTCCCAATTAATAATTCTACGATGCTTTACTCGGGCTACAGCTACGGATTTGGTTTTAGCTCCAACACAAAACACTACAAAATAGTTAA
ACTTTCTGTAATAAGAAATGGGTTATATGTAGTGGATATTTTTACAATTGGTTCATTTACCCGAAGTAGTTCTGGAAAATGGAGTAGGGTTCCGTTCATGCCGTTTTTTG
TTTTTGGTTGTAAAGATGGTGTTTACTTGAATGGATATCTTTATTGGCATGGATACTACCGTAATATTAGAAACCGAGGTAGGGATATGGATATGGATATGGTTCTTTTA
CGTTTTGACGTAGAAGATGAGAAATTTCAACAAGTTTCTTTTCCCCCAAATGGGCAAGATGGAGCTTTTCATCCTTCTTCCCATATTTGGATCTTTAATAACAACCTCTA
TCTCTCTTGTTTGAACTTACATTTTAAGAGTGGTGAGTTCCATGTGTGGAAGATGGAGCAAGATTCGTGGTTTAAAGAATTTGTTATTCCACTGCCCATTGATTCAGTGC
TGCATTATCCTATAAACTACTATGATGTGAGTACTTCATATCTCTTCCAACTCATCAAAGTTTTTGAAGATGGAAAGATGTTGTGTGTTGTTTCTAGCAAGGATTTAATT
TTATACGACTCCAAGACCAAGCAGACAGAGGCGTTGAATGATAAGCTAAATCACCACGGAAGATTATGTATTCATGAAATTGATTCATTCAATTTTGGTTCTCTTCCAAA
GACTTTGGGACTTTGA
Protein sequenceShow/hide protein sequence
MTNEYVELPINNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNRGRDMDMDMVLL
RFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQDSWFKEFVIPLPIDSVLHYPINYYDVSTSYLFQLIKVFEDGKMLCVVSSKDLI
LYDSKTKQTEALNDKLNHHGRLCIHEIDSFNFGSLPKTLGL