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CaUC10G190760 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G190760
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCytochrome c oxidase subunit 5C
Genome locationCiama_Chr10:24869536..24869721
RNA-Seq ExpressionCaUC10G190760
SyntenyCaUC10G190760
Gene Ontology termsGO:0005746 - mitochondrial respirasome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR008432 - Cytochrome c oxidase subunit 5c


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021686772.1 putative cytochrome c oxidase subunit 5C-4 isoform X1 [Hevea brasiliensis]5.2e-1870Show/hide
Query:  VGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        + HVA YKGPS++KEI+YG+ LGL AGGLWKM+QWNNQRRT+EFY+LL+RG+I+VV++E+
Subjt:  VGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

XP_022935291.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita moschata]1.5e-2083.61Show/hide
Query:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        MVG V  YKGPS+IKEI+YGVG+GLMAGGLWKMH WN QRRTKEFYELLDRGDITVV+ ED
Subjt:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

XP_022983411.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita maxima]2.5e-2083.61Show/hide
Query:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        MVG+V  YKGPS IKEI+YGVG+GLMAGGLWKMH WN QRRTKEFYELLDRGDITVV+ ED
Subjt:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

XP_023528587.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita pepo subsp. pepo]8.6e-2183.61Show/hide
Query:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        MVG+V  YKGPS+IKEI+YGVG+GLMAGGLWKMH WN QRRTKEFYELLDRGDITVV+ ED
Subjt:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

XP_038906018.1 putative cytochrome c oxidase subunit 5C-4 [Benincasa hispida]1.1e-2390.16Show/hide
Query:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        MVG VAYYKGPSIIKEI+YGVG+GLMAGGLWKMH WN QR+TKEFYELLDRGDITVVIQED
Subjt:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

TrEMBL top hitse value%identityAlignment
A0A200RDF8 Cytochrome c oxidase subunit Vc2.5e-1877.78Show/hide
Query:  YKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        YKGPSIIKEIMYG+ LGL+AGGLWKMH WNNQRRTKEFY+LL++GDI+VV++++
Subjt:  YKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

A0A6A6M6P8 SEC63 domain-containing protein1.6e-1769.49Show/hide
Query:  VGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQE
        + HVA YKGPS++KEI+YG+ LGL AGGLWKM+QWNNQRRT+EFY+LL+RG+I+VV+++
Subjt:  VGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQE

A0A6J1F554 putative cytochrome c oxidase subunit 5C-47.1e-2183.61Show/hide
Query:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        MVG V  YKGPS+IKEI+YGVG+GLMAGGLWKMH WN QRRTKEFYELLDRGDITVV+ ED
Subjt:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

A0A6J1IZ83 putative cytochrome c oxidase subunit 5C-41.2e-2083.61Show/hide
Query:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        MVG+V  YKGPS IKEI+YGVG+GLMAGGLWKMH WN QRRTKEFYELLDRGDITVV+ ED
Subjt:  MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

V4U6T4 Uncharacterized protein2.8e-1766.07Show/hide
Query:  AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        A Y+GPS++KEI+YG+ +GL AGGLWKMHQWNNQRRT+EFY+LL++G+I+VV++++
Subjt:  AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

SwissProt top hitse value%identityAlignment
O22912 Probable cytochrome c oxidase subunit 5C-18.6e-1657.81Show/hide
Query:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE+  G+ LGL AGGLWKMH WN QR+T+ FY+LL+RG+I+VV  E+
Subjt:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

P19173 Cytochrome c oxidase subunit 5C5.4e-1862.3Show/hide
Query:  GHVAY--YKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        GHVA+  YKGPS++KE++ G  LGL+AGG WKMH WN+QRRTKEFY++L++G I+VV  E+
Subjt:  GHVAY--YKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

Q42841 Cytochrome c oxidase subunit 5C1.5e-1556.67Show/hide
Query:  GHVAY--YKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQE
        G VA+   KGPS++KEI  G+ LGL+AGG+WKMH WN QR+T+ FY++L++G I+VV++E
Subjt:  GHVAY--YKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQE

Q9FLK2 Probable cytochrome c oxidase subunit 5C-31.1e-1557.81Show/hide
Query:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE++ G+ LGL AGGLWKMH WN QR+T+ FY+LL+RG+I VV+ E+
Subjt:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

Q9FNE0 Putative cytochrome c oxidase subunit 5C-43.7e-1966.07Show/hide
Query:  AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        A YKGPS++KEI+YG+ LG   GGLWKMH WNNQRRTKEFY+LL++G+I+VV++++
Subjt:  AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

Arabidopsis top hitse value%identityAlignment
AT2G47380.1 Cytochrome c oxidase subunit Vc family protein6.1e-1757.81Show/hide
Query:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE+  G+ LGL AGGLWKMH WN QR+T+ FY+LL+RG+I+VV  E+
Subjt:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

AT5G40382.1 Cytochrome c oxidase subunit Vc family protein2.7e-2066.07Show/hide
Query:  AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        A YKGPS++KEI+YG+ LG   GGLWKMH WNNQRRTKEFY+LL++G+I+VV++++
Subjt:  AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

AT5G61310.1 Cytochrome c oxidase subunit Vc family protein8.0e-1757.81Show/hide
Query:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE++ G+ LGL AGGLWKMH WN QR+T+ FY+LL+RG+I VV+ E+
Subjt:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

AT5G61310.2 Cytochrome c oxidase subunit Vc family protein8.0e-1757.81Show/hide
Query:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE++ G+ LGL AGGLWKMH WN QR+T+ FY+LL+RG+I VV+ E+
Subjt:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED

AT5G61310.3 Cytochrome c oxidase subunit Vc family protein8.0e-1757.81Show/hide
Query:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE++ G+ LGL AGGLWKMH WN QR+T+ FY+LL+RG+I VV+ E+
Subjt:  MVGHV---AYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGTCATGTTGCATATTACAAGGGACCAAGCATAATAAAAGAGATAATGTATGGAGTGGGGCTCGGCCTAATGGCCGGTGGCCTCTGGAAAATGCACCAATGGAA
TAATCAAAGGAGAACCAAAGAGTTCTATGAGCTGCTTGATCGAGGTGATATCACTGTTGTGATTCAAGAAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGTCATGTTGCATATTACAAGGGACCAAGCATAATAAAAGAGATAATGTATGGAGTGGGGCTCGGCCTAATGGCCGGTGGCCTCTGGAAAATGCACCAATGGAA
TAATCAAAGGAGAACCAAAGAGTTCTATGAGCTGCTTGATCGAGGTGATATCACTGTTGTGATTCAAGAAGACTAA
Protein sequenceShow/hide protein sequence
MVGHVAYYKGPSIIKEIMYGVGLGLMAGGLWKMHQWNNQRRTKEFYELLDRGDITVVIQED