; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC10G190930 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G190930
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1
Genome locationCiama_Chr10:25053801..25058025
RNA-Seq ExpressionCaUC10G190930
SyntenyCaUC10G190930
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0048576 - positive regulation of short-day photoperiodism, flowering (biological process)
GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003730 - mRNA 3'-UTR binding (molecular function)
GO:0097157 - pre-mRNA intronic binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581052.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]4.3e-20395.37Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGYDGTGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR        GGGGGGYDG GSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGYDGTGSAPSGRYHPYGR

KAG7017783.1 Nuclear pore complex protein, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-20395.12Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGY+ARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGYDGTGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR        GGGGGGYDG GSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGYDGTGSAPSGRYHPYGR

XP_022934343.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata]5.6e-20395.13Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---------GGGGGGYDGTGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR         GGGGGGYDG GSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---------GGGGGGYDGTGSAPSGRYHPYGR

XP_022982535.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita maxima]7.3e-20395.36Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGTGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR       GGGGGGYDG GSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGTGSAPSGRYHPYGR

XP_023528997.1 LOW QUALITY PROTEIN: nuclear pore complex protein GP210 [Cucurbita pepo subsp. pepo]3.3e-20395.62Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGTGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR       GGGGGGYDG GSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGTGSAPSGRYHPYGR

TrEMBL top hitse value%identityAlignment
A0A0A0LG75 Uncharacterized protein6.1e-20396.34Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPND ATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPPAPSKR+HDSRPSYSGAYGDAYGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--GGGGGGYDGTGSAPSGRYHPYGR
        ASFSRGYDFRGGYGGPDESYGAYNS GAP+TGGYAGSYDMG+GTGY AGGRGSFYGSR  GGGGGGYDG GSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--GGGGGGYDGTGSAPSGRYHPYGR

A0A1S4E4Y8 heterogeneous nuclear ribonucleoprotein 12.5e-20196.86Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPND ATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY
        AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSGAY GDAYGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARY
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY

Query:  GASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYGR
        GASFSRGYDFRGGYGGPDESYGAYNS GAPNTGGYA SYDMG+GTGY AGGRGSFYGSR GGGGGYDG GSAPSGRYHPYGR
Subjt:  GASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYGR

A0A5D3D587 Heterogeneous nuclear ribonucleoprotein 12.5e-20196.86Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPND ATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY
        AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSGAY GDAYGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARY
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY

Query:  GASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYGR
        GASFSRGYDFRGGYGGPDESYGAYNS GAPNTGGYA SYDMG+GTGY AGGRGSFYGSR GGGGGYDG GSAPSGRYHPYGR
Subjt:  GASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYGR

A0A6J1F7E2 heterogeneous nuclear ribonucleoprotein 12.7e-20395.13Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---------GGGGGGYDGTGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR         GGGGGGYDG GSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---------GGGGGGYDGTGSAPSGRYHPYGR

A0A6J1J2Y6 heterogeneous nuclear ribonucleoprotein 13.6e-20395.36Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGTGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR       GGGGGGYDG GSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGTGSAPSGRYHPYGR

SwissProt top hitse value%identityAlignment
P09651 Heterogeneous nuclear ribonucleoprotein A11.6e-3037.03Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT
        K+F+GGL  ETT      HF  +G +TD V+M+D  T   RGFGFVTYA    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT

Query:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAY---
          +E   RD+F QYG+++  +IM D  + + RGF F+TF+   +VD ++       + G   E++KA  K+     + S+R      ++ G  G  +   
Subjt:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAY---

Query:  ------GEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRG-GYGGPDESYGAYNSSGAPNTGG
              G F G G  GG R GG YG  G GY G+ GND    G YG GG G        G S  YG S  +GY  +G GYGG   SY +YN+ G    GG
Subjt:  ------GEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRG-GYGGPDESYGAYNSSGAPNTGG

Query:  YAGSYDMGIGTGYPAGGRGSFYGSRGG--GGGGYDGTGSAPSG
         +GS + G G  Y   G  +   S  G   GG + G  S P G
Subjt:  YAGSYDMGIGTGYPAGGRGSFYGSRGG--GGGGYDGTGSAPSG

P51991 Heterogeneous nuclear ribonucleoprotein A31.2e-3037.04Show/hide
Query:  HDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD
        HDP    +     K+F+GGL  ETT     +HF  +G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S      
Subjt:  HDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD

Query:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRP
           KKIFVGGI    +E   RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R 
Subjt:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRP

Query:  SYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPN
          SG +    G FGGG  GG F  GG +G R GGYGG GG     YG    GG G Y  +   G    YG     GY  RGGYGG           G P 
Subjt:  SYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPN

Query:  TGGYAGSYDMGIG-TGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYG
         G   G Y  G G  GY  G  G+F G   GGGG Y+  G+    +   YG
Subjt:  TGGYAGSYDMGIG-TGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYG

Q6URK4 Heterogeneous nuclear ribonucleoprotein A31.8e-3137.71Show/hide
Query:  HDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD
        HDP    +     K+F+GGL  ETT     +HF  +G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S      
Subjt:  HDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD

Query:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRP
           KKIFVGGI    +E   RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R 
Subjt:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRP

Query:  SYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPN
          SG +    G FGGG  GG F  GG +G R GGYGG GG     YG    GG G Y  +   G    YG     GY  RGGYGG    YG  N  G   
Subjt:  SYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPN

Query:  TGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYG
         GG  G YD     GY  G  G+F G   GGGG Y+  G+    +   YG
Subjt:  TGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYG

Q8BG05 Heterogeneous nuclear ribonucleoprotein A31.8e-3137.71Show/hide
Query:  HDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD
        HDP    +     K+F+GGL  ETT     +HF  +G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S      
Subjt:  HDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD

Query:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRP
           KKIFVGGI    +E   RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R 
Subjt:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRP

Query:  SYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPN
          SG +    G FGGG  GG F  GG +G R GGYGG GG     YG    GG G Y  +   G    YG     GY  RGGYGG    YG  N  G   
Subjt:  SYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPN

Query:  TGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYG
         GG  G YD     GY  G  G+F G   GGGG Y+  G+    +   YG
Subjt:  TGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYG

Q8W034 Heterogeneous nuclear ribonucleoprotein 12.8e-4037Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF +YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +++G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP

Query:  APSKRYHDSRPSYSG-----------AYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD
           + Y  +  SY G           + G+    +G  GYG G+   G  GA  G YGGY G+   GYG   T G GA    P  GY +  G +    +D
Subjt:  APSKRYHDSRPSYSG-----------AYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD

Query:  --FRGGYGGPDESYGAYNS-----SGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYG
             GYG P    GA +S       AP T             GGY+GS D G G         G P+GG  +  GS G  GGGY G GS  S     YG
Subjt:  --FRGGYGGPDESYGAYNS-----SGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYG

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.9e-5341.04Show/hide
Query:  ASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG
        +S GK+FVGG+  ETT+  F  +FG +GE+ DSVIM DR TG+PRGFGFVT+AD +V +KV+E+ H+I+ ++V++KRT+P+G   +      KT+KIFVG
Subjt:  ASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG

Query:  GIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA----PSKRYHDSRPSYSGA
        G+P  ++EDE +++F  YG++ EHQIM DH T RSRGFGF+TF+TE +VD L ++G   E+   QVEIK+AEPK+     +     +   +D   SYSG 
Subjt:  GIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA----PSKRYHDSRPSYSGA

Query:  YGDAYGEFGG-GGYGGGFRAGGPYGARGGGYGGYGGNDF-SGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGG
          + Y  + G GGY              GGYG Y GN   +  G YG GG          GY   YG     G  F  GYG      G Y+  G+     
Subjt:  YGDAYGEFGG-GGYGGGFRAGGPYGARGGGYGGYGGNDF-SGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGG

Query:  YAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPY
            Y +     Y  GG+    G+ G   G  +GT  +   RYHPY
Subjt:  YAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPY

AT3G13224.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-6867.78Show/hide
Query:  SRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F KHFG YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKK
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN ++MA +QV + K
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKK

AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.5e-8454.97Show/hide
Query:  SRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F KHFG YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSR
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN ++MA +QVEIKKAEPKK+     PS   H   
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSR

Query:  PSYSGAYGDAYGEFGG--GGYG---GGFRA-GGPYGARGGGYG---GYGGNDF-SGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDES
         S + +Y    G +GG  GGYG   G  R+ GGP     GGYG   G  G +F  GY  YG G +G YR +P +GYS+R+G  +  G+   G   G + +
Subjt:  PSYSGAYGDAYGEFGG--GGYG---GGFRA-GGPYGARGGGYG---GYGGNDF-SGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDES

Query:  YGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYGR
        Y  Y   G    GGY G    G G  Y +GG G   GS  G GG Y G G + S RYHPY R
Subjt:  YGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYGR

AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-4137Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF +YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +++G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP

Query:  APSKRYHDSRPSYSG-----------AYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD
           + Y  +  SY G           + G+    +G  GYG G+   G  GA  G YGGY G+   GYG   T G GA    P  GY +  G +    +D
Subjt:  APSKRYHDSRPSYSG-----------AYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD

Query:  --FRGGYGGPDESYGAYNS-----SGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYG
             GYG P    GA +S       AP T             GGY+GS D G G         G P+GG  +  GS G  GGGY G GS  S     YG
Subjt:  --FRGGYGGPDESYGAYNS-----SGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYG

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.6e-10858.96Show/hide
Query:  MDSKPNDAATNGEHDDAKPLNH-KDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI
        MD    +     E  D KP    +DD  +  P   G   SAGKIFVGGL RETTSA+F+KHFG YGEITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI
Subjt:  MDSKPNDAATNGEHDDAKPLNH-KDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI

Query:  EDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQ
        +D HII GKQVEIKRTIP+GS SS DFKTKKIFVGGIP+SVD+DEF++FFMQ+GE+KEHQIMRDHST RSRGFGF+T+E+E  VD LLA GNR+E++G+Q
Subjt:  EDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQ

Query:  VEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGY---GGGFRAGGPY-GARGGGYGGYGGNDFSGYGMYG-TGGIGAYREDPSMGYSARY
        VEIKKAEPKK N    PSKR+ DSR ++ G YGD YG   GGGY   GG +++GG Y G R GGYGGYGG +F GYG  G  GG+G YR +P++GYS RY
Subjt:  VEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGY---GGGFRAGGPY-GARGGGYGGYGGNDFSGYGMYG-TGGIGAYREDPSMGYSARY

Query:  ---GASFSR-GYDF---------------------RGGYGGPDESY-GAYNSS---------GAPNTGGY--AGSYDM-GIG----TGYPAGGRGSFYGS
           G  ++R GY                        GGYGGP  SY G Y SS         G    GGY   G YDM G+G     GY AGG G+  GS
Subjt:  ---GASFSR-GYDF---------------------RGGYGGPDESY-GAYNSS---------GAPNTGGY--AGSYDM-GIG----TGYPAGGRGSFYGS

Query:  RGGGGGGYDGTGSAPSGRYHPYGR
          GGGGG  G G   SGRYHPYGR
Subjt:  RGGGGGGYDGTGSAPSGRYHPYGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAAAACTCCATGGATTCCAAGCCAAATGATGCTGCCACTAACGGTGAACATGACGATGCCAAGCCCTTGAACCATAAAGATGATGGGAGTAGACATGACCCTCC
ACCTCATGGCGACGGAGCGAGTGCTGGGAAAATCTTTGTTGGAGGTTTACCGCGGGAAACGACTTCCGCACAATTTGTTAAACATTTTGGTGACTATGGGGAAATTACGG
ACTCTGTTATAATGAAGGACCGGAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATT
AATGGGAAACAAGTGGAAATCAAGCGAACGATACCCAAAGGATCATCCAGCTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCTACTTCTGTAGATGA
AGATGAGTTCAGAGATTTTTTTATGCAATATGGTGAGGTTAAGGAACACCAGATTATGCGGGATCACTCCACCAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGA
CGGAGCAAGCAGTTGATGATCTCTTGGCAAATGGAAACAGGCTTGAGATGGCAGGCAGTCAGGTGGAGATCAAGAAGGCGGAGCCAAAAAAAGCAAATCCACCTCCAGCC
CCTTCAAAGAGATACCATGACTCAAGGCCAAGTTACAGTGGTGCCTATGGGGATGCATATGGGGAGTTTGGAGGTGGTGGGTATGGTGGTGGTTTTAGGGCAGGTGGACC
GTATGGTGCTAGAGGTGGTGGATATGGTGGATATGGTGGAAACGATTTTAGTGGTTATGGAATGTATGGTACTGGTGGCATTGGAGCTTACCGGGAAGACCCCTCTATGG
GGTACTCTGCGCGTTATGGAGCAAGCTTCAGTAGAGGTTATGATTTTAGAGGTGGCTATGGTGGACCTGACGAGAGTTATGGTGCGTATAACAGCAGTGGTGCTCCTAAT
ACTGGTGGGTATGCGGGCAGCTATGATATGGGCATTGGCACTGGATACCCTGCCGGTGGTAGAGGCTCCTTTTATGGAAGTAGAGGAGGAGGAGGAGGAGGATATGATGG
CACAGGGAGTGCTCCAAGTGGTCGTTATCATCCTTATGGGCGGTAG
mRNA sequenceShow/hide mRNA sequence
GTCTGGAGGTTGGGCGAATTGCGAATTGCGAACTGCGAATTCTAGGGTTTAAGGGGGCGCCATTTTTTCCGTACTCAGCGGTGCGAACCAACAGCAGCTCACACATGTCC
TCTAGGGCTTAGCCATCTCCCTCGTTCCTTTGTCTTTACCCTCTCTCTCTTCTCCTTCTCCTCCTCCTTCTTCCCTTTATTCCGTTAATGTCGGAAAACTCCATGGATTC
CAAGCCAAATGATGCTGCCACTAACGGTGAACATGACGATGCCAAGCCCTTGAACCATAAAGATGATGGGAGTAGACATGACCCTCCACCTCATGGCGACGGAGCGAGTG
CTGGGAAAATCTTTGTTGGAGGTTTACCGCGGGAAACGACTTCCGCACAATTTGTTAAACATTTTGGTGACTATGGGGAAATTACGGACTCTGTTATAATGAAGGACCGG
AAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATTAATGGGAAACAAGTGGAAATCAA
GCGAACGATACCCAAAGGATCATCCAGCTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCTACTTCTGTAGATGAAGATGAGTTCAGAGATTTTTTTA
TGCAATATGGTGAGGTTAAGGAACACCAGATTATGCGGGATCACTCCACCAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGACGGAGCAAGCAGTTGATGATCTC
TTGGCAAATGGAAACAGGCTTGAGATGGCAGGCAGTCAGGTGGAGATCAAGAAGGCGGAGCCAAAAAAAGCAAATCCACCTCCAGCCCCTTCAAAGAGATACCATGACTC
AAGGCCAAGTTACAGTGGTGCCTATGGGGATGCATATGGGGAGTTTGGAGGTGGTGGGTATGGTGGTGGTTTTAGGGCAGGTGGACCGTATGGTGCTAGAGGTGGTGGAT
ATGGTGGATATGGTGGAAACGATTTTAGTGGTTATGGAATGTATGGTACTGGTGGCATTGGAGCTTACCGGGAAGACCCCTCTATGGGGTACTCTGCGCGTTATGGAGCA
AGCTTCAGTAGAGGTTATGATTTTAGAGGTGGCTATGGTGGACCTGACGAGAGTTATGGTGCGTATAACAGCAGTGGTGCTCCTAATACTGGTGGGTATGCGGGCAGCTA
TGATATGGGCATTGGCACTGGATACCCTGCCGGTGGTAGAGGCTCCTTTTATGGAAGTAGAGGAGGAGGAGGAGGAGGATATGATGGCACAGGGAGTGCTCCAAGTGGTC
GTTATCATCCTTATGGGCGGTAGTAACTAGTGGCGGGGAGCTTTTGTTAATTGATGTGCTACAAGGACGGCAATGCTGATAAGTCCCGGGTCCTCAAAATAATGATAAAT
ATGTGTGCCTCTTACCGTCACAAGATTCCTGCCATGTTCATCAGGATCACAATTTTCAGAGATTTAGAATTTGACTGTACAATTGATTGTGACTAACTTGCTGGAGATTG
TGCTAAGATTATGTATCACCTATATATGCCATTAATTTCTCCATTTTGCTACCAACATTTACGTTGTTTTAGTGACATGGTTATTTTGAAGAATGTTTAATGAATTGGAA
TTTTTCGGTTTCCTTCTA
Protein sequenceShow/hide protein sequence
MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHII
NGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA
PSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPN
TGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGTGSAPSGRYHPYGR