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CaUC10G190980 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G190980
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr10:25096420..25096778
RNA-Seq ExpressionCaUC10G190980
SyntenyCaUC10G190980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59830.2 hypothetical protein Csa_001071 [Cucumis sativus]1.6e-0486.67Show/hide
Query:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE
        +AGYGI GQGRE LKLF+KMIETSEVMPNE
Subjt:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE

XP_008464928.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis melo]1.6e-0486.67Show/hide
Query:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE
        +AGYGI GQGRE LKLF+KMIETSEVMPNE
Subjt:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE

XP_011652303.1 putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis sativus]1.6e-0486.67Show/hide
Query:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE
        +AGYGI GQGRE LKLF+KMIETSEVMPNE
Subjt:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE

XP_038905362.1 putative pentatricopeptide repeat-containing protein At3g01580 [Benincasa hispida]2.8e-0479.41Show/hide
Query:  GQSVIEAGTEVHSSVTDDRLHPESDHIHSLQGNL
        GQSVIEAG+EVHS V DDRLHPESDHI+ L  NL
Subjt:  GQSVIEAGTEVHSSVTDDRLHPESDHIHSLQGNL

XP_038905362.1 putative pentatricopeptide repeat-containing protein At3g01580 [Benincasa hispida]4.8e-0483.33Show/hide
Query:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE
        +AGYGI GQGRE LKLF+KMIETS+VMPNE
Subjt:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE

TrEMBL top hitse value%identityAlignment
A0A0A0LFK2 Uncharacterized protein8.0e-0586.67Show/hide
Query:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE
        +AGYGI GQGRE LKLF+KMIETSEVMPNE
Subjt:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE

A0A1S3CMP5 putative pentatricopeptide repeat-containing protein At3g015808.0e-0586.67Show/hide
Query:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE
        +AGYGI GQGRE LKLF+KMIETSEVMPNE
Subjt:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE

A0A5A7UUL5 Putative pentatricopeptide repeat-containing protein8.0e-0586.67Show/hide
Query:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE
        +AGYGI GQGRE LKLF+KMIETSEVMPNE
Subjt:  MAGYGIPGQGREDLKLFDKMIETSEVMPNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGTTATGGAATCCCGGGACAAGGAAGAGAAGATTTGAAACTGTTTGACAAAATGATAGAGACATCAGAAGTTATGCCCAACGAAAATAAAACCCAACACAGAGC
ATTGTCATCAATGTCAATCTTCTTGGTCGAACAGGAGAACTCAACAGGGCAAAGTGTGATTGAAGCAGGAACTGAGGTCCATAGTTCCGTAACTGATGACAGATTACACC
CAGAATCTGACCACATTCATAGCTTACAAGGAAATTTGAGAGATGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGTTATGGAATCCCGGGACAAGGAAGAGAAGATTTGAAACTGTTTGACAAAATGATAGAGACATCAGAAGTTATGCCCAACGAAAATAAAACCCAACACAGAGC
ATTGTCATCAATGTCAATCTTCTTGGTCGAACAGGAGAACTCAACAGGGCAAAGTGTGATTGAAGCAGGAACTGAGGTCCATAGTTCCGTAACTGATGACAGATTACACC
CAGAATCTGACCACATTCATAGCTTACAAGGAAATTTGAGAGATGAA
Protein sequenceShow/hide protein sequence
MAGYGIPGQGREDLKLFDKMIETSEVMPNENKTQHRALSSMSIFLVEQENSTGQSVIEAGTEVHSSVTDDRLHPESDHIHSLQGNLRDE