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CaUC10G191140 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G191140
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionGibberellin-regulated family protein
Genome locationCiama_Chr10:25318547..25319626
RNA-Seq ExpressionCaUC10G191140
SyntenyCaUC10G191140
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464949.1 PREDICTED: protein GAST1-like [Cucumis melo]5.6e-5384.75Show/hide
Query:  MAKKQVM-LMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
        M +KQ++ ++LFVVMLLNCVLL HN AI EAP+PQPQ+S NY S+PMHGVTEGSLQPQECGPRCT RCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
Subjt:  MAKKQVM-LMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ

Query:  SCPCYNEWKTKRGGPKCP
        +CPCYN+WKTKRGGPKCP
Subjt:  SCPCYNEWKTKRGGPKCP

XP_011652310.1 protein GAST1 [Cucumis sativus]2.8e-5285.59Show/hide
Query:  MAKKQVM-LMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
        M +KQV+ ++LFVVMLLNCVLLVHN AI EAP+PQPQ+S NY S+PMHGVTEGSLQPQECG RCT RCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
Subjt:  MAKKQVM-LMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ

Query:  SCPCYNEWKTKRGGPKCP
        +CPCYN+WKTKRGGPKCP
Subjt:  SCPCYNEWKTKRGGPKCP

XP_022159226.1 protein GAST1 [Momordica charantia]2.0e-5082.05Show/hide
Query:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MA+KQ M++ F+VM LN VLLV NHAI EAP+PQPQ  GN+   PM GVTEGSLQPQECGPRCT+RCSKTAFKKPCMFFCQKCCAKCLCVP+GTYGNKQS
Subjt:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYN+WKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

XP_023516497.1 protein GAST1-like [Cucurbita pepo subsp. pepo]2.4e-5181.2Show/hide
Query:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MA+KQ+M M F VM LNC+LL  NH+I EAP+PQPQS G  S  PMHGVTEGSL+P+ECG RC  RCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
Subjt:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYNEWKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

XP_038903614.1 protein GAST1 [Benincasa hispida]2.1e-6094.02Show/hide
Query:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MA+KQVM+MLF+VMLLNCVLLVHNHAI EAP+PQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERC KTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+
Subjt:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYNEWKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LI43 Uncharacterized protein8.2e-5089.42Show/hide
Query:  MLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGG
        MLLNCVLLVHN AI EAP+PQPQ+S NY S+PMHGVTEGSLQPQECG RCT RCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+CPCYN+WKTKRGG
Subjt:  MLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGG

Query:  PKCP
        PKCP
Subjt:  PKCP

A0A1S3CMR4 protein GAST1-like2.7e-5384.75Show/hide
Query:  MAKKQVM-LMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
        M +KQ++ ++LFVVMLLNCVLL HN AI EAP+PQPQ+S NY S+PMHGVTEGSLQPQECGPRCT RCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
Subjt:  MAKKQVM-LMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ

Query:  SCPCYNEWKTKRGGPKCP
        +CPCYN+WKTKRGGPKCP
Subjt:  SCPCYNEWKTKRGGPKCP

A0A6J1E399 protein GAST19.7e-5182.05Show/hide
Query:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MA+KQ M++ F+VM LN VLLV NHAI EAP+PQPQ  GN+   PM GVTEGSLQPQECGPRCT+RCSKTAFKKPCMFFCQKCCAKCLCVP+GTYGNKQS
Subjt:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYN+WKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

A0A6J1EQZ6 protein GAST1-like5.9e-4876.07Show/hide
Query:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MA+KQ++   F V+LLNC+LL  NH+I EAP+PQP S G     PM GV+EGSL+P+ECG RC  RCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
Subjt:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYNEWKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

A0A6J1J049 protein GAST1-like1.8e-4980.67Show/hide
Query:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSG--NYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNK
        MA+KQV  M F VML NC+LL  NH+I EAP+PQPQS G  NY   PMHGVTEGSL+P+ECG RC  RCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNK
Subjt:  MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSG--NYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNK

Query:  QSCPCYNEWKTKRGGPKCP
        QSCPCYNEWKTKRGGPKCP
Subjt:  QSCPCYNEWKTKRGGPKCP

SwissProt top hitse value%identityAlignment
A8MR46 Gibberellin-regulated protein 131.2e-2672.46Show/hide
Query:  TEGSLQP-QECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        T+ ++ P  ECGPRC +RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN WKTK GGPKCP
Subjt:  TEGSLQP-QECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

P27057 Protein GAST16.1e-3460.55Show/hide
Query:  MLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWK
        M  V+ +L  V L  N  +  A   + +      ++ ++GV+EG L PQ+C P+CT RCSKT++KKPCMFFCQKCCAKCLCVP GTYGNKQSCPCYN WK
Subjt:  MLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWK

Query:  TKRGGPKCP
        TKRGGPKCP
Subjt:  TKRGGPKCP

P47926 Protein RSI-19.4e-2773.24Show/hide
Query:  VTEG--SLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        V EG   L+P +C PRCT RCS T+ KKPCMFFCQKCCA CLCVP G YGNKQSCPCYN WKT+ G PKCP
Subjt:  VTEG--SLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

Q6NMQ7 Gibberellin-regulated protein 61.9e-2775.76Show/hide
Query:  GSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        GSL+  +CG +CT RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++GGPKCP
Subjt:  GSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

Q84J95 Gibberellin-regulated protein 51.4e-2571.21Show/hide
Query:  GSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        G L+PQ+C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQ+CPCYN WKTK G PKCP
Subjt:  GSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein1.3e-2875.76Show/hide
Query:  GSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        GSL+  +CG +CT RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++GGPKCP
Subjt:  GSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

AT2G30810.1 Gibberellin-regulated family protein2.1e-2648.65Show/hide
Query:  MLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNE
        M+ L VV +++ +L     + G+    Q Q+   + +       EGSL+P+EC   C  RCS T+ +KPC+FFC KCC KCLCVP GTYG+K+ CPCYN 
Subjt:  MLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNE

Query:  WKTKRGGPKCP
        W TK GGPKCP
Subjt:  WKTKRGGPKCP

AT3G02885.1 GAST1 protein homolog 59.6e-2771.21Show/hide
Query:  GSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        G L+PQ+C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQ+CPCYN WKTK G PKCP
Subjt:  GSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

AT3G10185.1 Gibberellin-regulated family protein8.7e-2872.46Show/hide
Query:  TEGSLQP-QECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        T+ ++ P  ECGPRC +RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN WKTK GGPKCP
Subjt:  TEGSLQP-QECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

AT5G15230.1 GAST1 protein homolog 41.2e-2162.12Show/hide
Query:  GSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        GSL+  +C   C  RC KT + K C+ FC KCC KCLCVP G YGNKQ C CYN WKT+ GGPKCP
Subjt:  GSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGAAGCAAGTAATGTTGATGTTGTTTGTAGTAATGTTGCTGAATTGTGTTCTCTTAGTTCACAATCATGCCATCGGTGAGGCTCCATCACCACAGCCCCAAAG
CAGTGGGAATTATTCTTCCAGTCCCATGCATGGAGTCACTGAAGGCAGCCTTCAACCTCAAGAATGTGGACCAAGATGCACAGAGAGATGTTCAAAGACAGCATTCAAGA
AGCCATGCATGTTCTTTTGTCAAAAGTGCTGTGCCAAATGCTTGTGTGTGCCTTATGGGACTTATGGCAACAAGCAATCTTGTCCTTGCTACAATGAATGGAAGACTAAA
AGAGGAGGCCCCAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGAAGCAAGTAATGTTGATGTTGTTTGTAGTAATGTTGCTGAATTGTGTTCTCTTAGTTCACAATCATGCCATCGGTGAGGCTCCATCACCACAGCCCCAAAG
CAGTGGGAATTATTCTTCCAGTCCCATGCATGGAGTCACTGAAGGCAGCCTTCAACCTCAAGAATGTGGACCAAGATGCACAGAGAGATGTTCAAAGACAGCATTCAAGA
AGCCATGCATGTTCTTTTGTCAAAAGTGCTGTGCCAAATGCTTGTGTGTGCCTTATGGGACTTATGGCAACAAGCAATCTTGTCCTTGCTACAATGAATGGAAGACTAAA
AGAGGAGGCCCCAAATGCCCTTGA
Protein sequenceShow/hide protein sequence
MAKKQVMLMLFVVMLLNCVLLVHNHAIGEAPSPQPQSSGNYSSSPMHGVTEGSLQPQECGPRCTERCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTK
RGGPKCP