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CaUC10G191320 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G191320
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr10:25616479..25616862
RNA-Seq ExpressionCaUC10G191320
SyntenyCaUC10G191320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057194.1 hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa]1.7e-2657.81Show/hide
Query:  MGLHDWEFIDCHEHDEKTHRSGDQNRVFSLNHTDQSIVSVSKVSGLNLIGDVKKEPGTAAEFEVEEEENVNSRR-MDLANLAMEKRKQWGRMAICSFGIA
        MGL DWE +DCHE  ++  +S  +N V               +SG  LI D KKE    AEFEVEEEE  NSRR MD+A    EK+KQ GR  +CSFGIA
Subjt:  MGLHDWEFIDCHEHDEKTHRSGDQNRVFSLNHTDQSIVSVSKVSGLNLIGDVKKEPGTAAEFEVEEEENVNSRR-MDLANLAMEKRKQWGRMAICSFGIA

Query:  VAATICSVLLGSHSHHRGGAALVNKRHC
        VAATICSVLLGSHSHH GG A VNKRHC
Subjt:  VAATICSVLLGSHSHHRGGAALVNKRHC
KGN59752.1 hypothetical protein Csa_001232 [Cucumis sativus]5.2e-2858.91Show/hide
Query:  MGLHDWEFIDCHE-HDEKTHRSGDQNRVFSLNHTDQSIVSVSKVSGLNLIGDVKKEPGTAAEFEVEEEENVNSR-RMDLANLAMEKRKQWGRMAICSFGI
        MGL DWE +DCHE HD++  R              +++V    +SG  LIGD K E    AEF+VEEEE V+SR  MD   +AMEKRKQWGR  +CSFGI
Subjt:  MGLHDWEFIDCHE-HDEKTHRSGDQNRVFSLNHTDQSIVSVSKVSGLNLIGDVKKEPGTAAEFEVEEEENVNSR-RMDLANLAMEKRKQWGRMAICSFGI

Query:  AVAATICSVLLGSHSHHRGGAALVNKRHC
        AVAATICSVLLGSHSHH GG A VNKRHC
Subjt:  AVAATICSVLLGSHSHHRGGAALVNKRHC
TrEMBL top hitse value%identityAlignment
A0A0A0LG95 Uncharacterized protein2.5e-2858.91Show/hide
Query:  MGLHDWEFIDCHE-HDEKTHRSGDQNRVFSLNHTDQSIVSVSKVSGLNLIGDVKKEPGTAAEFEVEEEENVNSR-RMDLANLAMEKRKQWGRMAICSFGI
        MGL DWE +DCHE HD++  R              +++V    +SG  LIGD K E    AEF+VEEEE V+SR  MD   +AMEKRKQWGR  +CSFGI
Subjt:  MGLHDWEFIDCHE-HDEKTHRSGDQNRVFSLNHTDQSIVSVSKVSGLNLIGDVKKEPGTAAEFEVEEEENVNSR-RMDLANLAMEKRKQWGRMAICSFGI

Query:  AVAATICSVLLGSHSHHRGGAALVNKRHC
        AVAATICSVLLGSHSHH GG A VNKRHC
Subjt:  AVAATICSVLLGSHSHHRGGAALVNKRHC
A0A5D3D5E0 Uncharacterized protein8.1e-2757.81Show/hide
Query:  MGLHDWEFIDCHEHDEKTHRSGDQNRVFSLNHTDQSIVSVSKVSGLNLIGDVKKEPGTAAEFEVEEEENVNSRR-MDLANLAMEKRKQWGRMAICSFGIA
        MGL DWE +DCHE  ++  +S  +N V               +SG  LI D KKE    AEFEVEEEE  NSRR MD+A    EK+KQ GR  +CSFGIA
Subjt:  MGLHDWEFIDCHEHDEKTHRSGDQNRVFSLNHTDQSIVSVSKVSGLNLIGDVKKEPGTAAEFEVEEEENVNSRR-MDLANLAMEKRKQWGRMAICSFGIA

Query:  VAATICSVLLGSHSHHRGGAALVNKRHC
        VAATICSVLLGSHSHH GG A VNKRHC
Subjt:  VAATICSVLLGSHSHHRGGAALVNKRHC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTCCACGATTGGGAATTCATAGATTGCCATGAACATGACGAGAAAACGCATCGCAGTGGCGATCAGAACAGAGTTTTCTCTCTAAACCATACTGATCAATCTAT
TGTTTCTGTTTCAAAAGTTTCCGGCCTGAATTTGATCGGCGACGTGAAAAAAGAGCCAGGAACCGCCGCGGAATTTGAAGTGGAGGAGGAGGAAAACGTGAATTCGAGAA
GAATGGATCTGGCGAATCTGGCGATGGAGAAGAGAAAACAATGGGGAAGAATGGCAATTTGTTCGTTTGGAATTGCTGTGGCGGCTACCATTTGCTCTGTGTTATTAGGA
AGCCATAGCCACCACCGAGGCGGAGCTGCGCTTGTGAATAAGCGCCATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTCCACGATTGGGAATTCATAGATTGCCATGAACATGACGAGAAAACGCATCGCAGTGGCGATCAGAACAGAGTTTTCTCTCTAAACCATACTGATCAATCTAT
TGTTTCTGTTTCAAAAGTTTCCGGCCTGAATTTGATCGGCGACGTGAAAAAAGAGCCAGGAACCGCCGCGGAATTTGAAGTGGAGGAGGAGGAAAACGTGAATTCGAGAA
GAATGGATCTGGCGAATCTGGCGATGGAGAAGAGAAAACAATGGGGAAGAATGGCAATTTGTTCGTTTGGAATTGCTGTGGCGGCTACCATTTGCTCTGTGTTATTAGGA
AGCCATAGCCACCACCGAGGCGGAGCTGCGCTTGTGAATAAGCGCCATTGTTGA
Protein sequenceShow/hide protein sequence
MGLHDWEFIDCHEHDEKTHRSGDQNRVFSLNHTDQSIVSVSKVSGLNLIGDVKKEPGTAAEFEVEEEENVNSRRMDLANLAMEKRKQWGRMAICSFGIAVAATICSVLLG
SHSHHRGGAALVNKRHC